Spirosoma pollinicola: CWM47_25505
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Entry
CWM47_25505 CDS
T05236
Name
(GenBank) peptidase C39
KO
K20344
ATP-binding cassette, subfamily C, bacteriocin exporter
Organism
spir
Spirosoma pollinicola
Pathway
spir02010
ABC transporters
spir02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
spir00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
CWM47_25505
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
CWM47_25505
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
spir01002
]
CWM47_25505
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
spir02000
]
CWM47_25505
Peptidases and inhibitors [BR:
spir01002
]
Cysteine peptidases
Family C39
CWM47_25505
Transporters [BR:
spir02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC-BAC subgroup
CWM47_25505
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
Peptidase_C39
SMC_N
AAA_21
Peptidase_C39_2
nSTAND1
AAA_29
AAA_16
nSTAND3
AAA_22
AAA_25
AAA_23
DUF87
NACHT
RsgA_GTPase
NB-ARC
G-alpha
Motif
Other DBs
NCBI-ProteinID:
AUD04905
UniProt:
A0A2K8Z4V6
LinkDB
All DBs
Position
complement(6086689..6088851)
Genome browser
AA seq
720 aa
AA seq
DB search
MKSRKHINQTLVRQQGQADCGVACLASLLAYYGGHSRLERLRELSGTDPQGTSMLGLYQA
ASKIGFDAEGMEANSIENLKTDVSEPVILHVLIDNRLQHYVVCYGWESTTKHFLIGDPAQ
GILTYTTDELATIWPSKLLLALTPNASLSLQDDDRKAKRRWLLNLVRDDVPLLSIATGLG
IITAGLGLSTAIFSQKLIDEILPKHDTKRLLLGLSLLTFLLLARAIVGYVRGFLLNRQSR
DFNNRIINRFYEALLHLPKSFFDSRKTGELIARLNDTGRIQRTISHLTGAVVINALVVLV
SAGYLFTYSVWVGLLSVVSIPLYGGLVWYYHARILTGQRNVMAASAHTESNYVDTLQGID
IIKATNRESFFSTITKAVYGLYQQQVYRLGTIGLQFTLTAELINALLIAGLLAVTSVLVV
QKSLQLGEMMAILTLAGSIIPAVASLALTNLQIQEATVAFERMYEYAQLTPEHTTTSPDP
DFSFSSLNIQHLTYRFAGRPLLLENVSLTIDKGEFVAILGESGSGKSTLFQIIQRFYAPE
TGLIWVNGNDWQEVNTVTWRQAIGVIPQHITFFGGTLLDNICLGNTTEKAESIIRFCEQH
GFAPYFESFPQGYLTLLGEDGVNLSGGQRQLVALARALYQKPQLLLLDEPTSAMDKHTEQ
FVMEMLNHLYPHLAILLITHKPGLAHTADRVYSMANRQLTPTDIHNWLKDNRAALEPILK
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atgaaatcccgcaaacacatcaaccagaccctcgttcggcaacaggggcaggccgattgt
ggggtggcttgcctggcctcgttattggcctactatggcggccatagtaggctggagcgg
ttacgcgaacttagcggtaccgatccacagggcacatccatgctgggtttgtatcaggcg
gcttcgaagattggcttcgatgccgaggggatggaagctaattctatcgagaatttaaag
accgatgttagcgagcctgttatactccatgtgctcattgacaataggctgcaacactac
gttgtctgctacggctgggagtccaccacaaaacacttcctcatcggcgatcccgcgcag
ggcatccttacctataccacagacgaactggcaactatctggccgtcaaaattgcttcta
gccctaacaccaaacgctagcctgagtctacaggacgatgacagaaaggccaaacgtcgc
tggctgctcaatctcgttcgggatgatgttcctttactcagtattgctaccggactaggc
attataaccgcaggactgggactgtccacggcaattttctcgcaaaaactaatcgacgaa
attttaccaaaacacgacaccaaacggctactgctgggcttgtcgctgttaacattccta
ctgctggcacgggcaattgtcggttatgttcgtggtttcctgcttaatcgacaaagccgc
gacttcaacaaccggatcatcaatcgattctacgaagccctgctacacctcccgaagtcg
ttttttgatagtcgtaaaaccggagaactaatagcgcgtctgaatgatacgggccgcatt
caacgaaccatcagtcatctgacgggcgcggtagttatcaatgccctggtcgtactggtg
tcggccgggtacctgttcacctattcggtttgggtgggcttgttgagtgtggttagtatt
ccgctatatggcgggttggtgtggtactaccacgcccgcatattaaccggacagcgcaac
gtgatggcggcttcggcccataccgaaagtaattatgtcgataccctacaagggattgat
attatcaaagccaccaaccgcgaatcgtttttcagcaccatcaccaaagccgtttatggc
ctgtatcagcaacaggtgtatcggctcggcacaatcgggctacaatttaccctgaccgcc
gagctaatcaacgctttacttattgccggtttactggcagtcacgtcggtgctggttgtt
cagaaatctctacaactgggcgagatgatggctattctaacccttgcaggcagtatcatc
ccggcagttgccagtctggcattgaccaatcttcagattcaggaggcaactgttgccttt
gagcggatgtatgaatatgcgcaattaacccccgaacataccaccacctcgccagacccg
gactttagtttttcatctcttaacatccagcacctcacctaccggtttgcgggtcgcccc
ttactgctggaaaacgtttccttaactattgacaaaggcgagttcgtggcgattctgggc
gaaagcggcagtggcaagagcacactctttcagataattcaacgattttatgcacccgaa
actggcttgatttgggtaaatggaaacgattggcaggaggtcaataccgttacctggcgg
caagccattggtgtaattcctcaacacatcacgttctttggtggaaccttactcgataat
atttgcctgggcaatactaccgaaaaagccgagtctattatccggttctgcgaacaacat
gggttcgcgccgtattttgagagcttcccacaaggttacttaacgttgctgggagaagat
ggtgtgaacctgtcgggcggacaacgacaactggttgccctggctcgggctttataccag
aagccccaactgcttttgctggatgaaccaacttcggcaatggacaaacataccgagcag
tttgtgatggagatgctaaaccacctatacccgcatctcgccatcctgctaatcacgcac
aaaccgggtttagcccacaccgctgaccgggtatactcaatggccaacaggcaattgacc
cccaccgacatccacaactggctcaaggataaccgagccgcgctggagcctattttaaag
taa
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