Spirosoma pollinicola: CWM47_27335
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Entry
CWM47_27335 CDS
T05236
Name
(GenBank) integration host factor subunit beta
KO
K03530
DNA-binding protein HU-beta
Organism
spir
Spirosoma pollinicola
Brite
KEGG Orthology (KO) [BR:
spir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
spir03032
]
CWM47_27335
03036 Chromosome and associated proteins [BR:
spir03036
]
CWM47_27335
03400 DNA repair and recombination proteins [BR:
spir03400
]
CWM47_27335
DNA replication proteins [BR:
spir03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
CWM47_27335
Chromosome and associated proteins [BR:
spir03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
CWM47_27335
DNA repair and recombination proteins [BR:
spir03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
CWM47_27335
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_2
HU-CCDC81_bac_2
RecA-like_ORC2
HU-CCDC81_euk_1
Ogg-HhH
Motif
Other DBs
NCBI-ProteinID:
AUD05231
UniProt:
A0A2K8Z5T6
LinkDB
All DBs
Position
6519909..6520211
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AA seq
100 aa
AA seq
DB search
MTKADVIAEISDKTGIDKAEVTNTLETFFSVVKDSLAEGENIYVRGFGSFINKKRAKKVA
RNISKNTAMVIDEHFIPSFKPAKVFVEQVKTSDKAKVTAE
NT seq
303 nt
NT seq
+upstream
nt +downstream
nt
gtgacgaaagcagatgtaattgccgagatctccgataagaccggaattgacaaggcagaa
gtgacaaacacactggaaacattcttttcagtagttaaggactcgctggccgagggagag
aacatttatgtgagagggttcggcagcttcatcaataagaaaagagccaagaaagtagcc
cggaatatctcgaagaataccgctatggtaatcgatgagcactttattccgagctttaaa
cccgccaaagtttttgttgagcaggtaaaaaccagcgacaaagccaaagtaacggcggag
taa
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