Spirosoma pollinicola: CWM47_28815
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Entry
CWM47_28815 CDS
T05236
Name
(GenBank) SusC/RagA family TonB-linked outer membrane protein
KO
K21573
TonB-dependent starch-binding outer membrane protein SusC
Organism
spir
Spirosoma pollinicola
Brite
KEGG Orthology (KO) [BR:
spir00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
spir02000
]
CWM47_28815
Transporters [BR:
spir02000
]
Other transporters
Pores ion channels [TC:
1
]
CWM47_28815
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
CarbopepD_reg_2
CarboxypepD_reg
Motif
Other DBs
NCBI-ProteinID:
AUD07534
UniProt:
A0A2K8ZCG6
LinkDB
All DBs
Position
complement(6844109..6847171)
Genome browser
AA seq
1020 aa
AA seq
DB search
MWVVCCSALSTSVSAQQDRRVTGKVISAEDGTALPGVSIVAKGTSRGTQTDADGNYELSV
PVNIGTLVYSFVGVVTQEVSIGNRSVVNVTLSNDTRSLDEVIVTGYGAQSKRNLTGNIAK
VGARDIENIPVPSVEQALQGKVAGVQITSLNGKVGQGLQIRVRGASSLTASSQPLYVIDG
IPMTSADQSSTTAPTNPIADLNPNDIESMEILKDASSAAIYGSRASNGVVLITTKKGRAA
KTTFDASAQMGASNPTHLRQWLNTQQYVELLQEARENTGATSATSLANRFTRYAAGDATG
WQGANPKYNTDWQQEAFQKAPSQQYDLSARGGDAKTRFFISGQYFDQSGIIIKNRFRRLS
GRVNLDHTATEKLTLGVNMNISHSINDRVSNDNAFSTPMQIVALSPMSPVIDPRTNRLSG
ADPDLFPSYPLYYNPLINRDYAALQARVYRVIGNVYADYKLLPGLSFRTEFGTDLLSQQE
EEYYGRETRANTGAPNGLGSNTFRQVSNYTTNNYFSFGRTFAEKHDVDATLGMSYQESRN
NYNSVTGQQFPSSAYKQVTSAAKITAGDGQETRFSFLSYFARVNYRFNNRYLLGASARID
GSSRFGANDRYGFFPAASAGWILTEEPFLKNVKALSLLKLRASYGLTGNAEIGNFSSLAL
YAATNNAGTSAGYAGVPGQAPSQIPNPDLTWEKTLQTDVGLEFGFLNNRFTGEIDYYQKN
TSGLLLNVNVPGSSGFRTQLRNVGRLENKGFEFVFNSNNFTGPFKWTTSLNIAYNKNKIT
DLGGTTITGSFLNRAQEGQPIGVFVGPEYAGVDVQNGDALYYKNSTNADGTLDRTTTNDY
NSAAYVPLGSPTPKFIGGITNTFSFAGIDLSVLFNGQFDYYIYNGGGKFQSANGDYFDNQ
SVDQLNRWKKPGDITNVPQARLLGGNGTGESSRYLQKGDYVRLRTITLGYTLPKALLNRI
HLTRVRVFATGQNLLTFTKYTGWDPEVNSDAYSSNPVNLGIDFYSAPQPRTIIGGLQIGF
NT seq
3063 nt
NT seq
+upstream
nt +downstream
nt
ctgtgggtagtctgttgcagtgcattgagcacgagcgtcagtgcgcagcaggatcgaagg
gtgacaggaaaggtcatttcagctgaggacggcaccgctttgccgggtgtgtcgattgtg
gcgaaaggcacaagccgaggtacgcagacggatgccgatgggaactatgaattgtctgtt
cctgtcaacattggtacgttggtgtatagcttcgtgggcgttgttacgcaggaagtatcc
atcggcaaccgctcggttgtgaatgtgacactgagcaacgatacccgttcgctcgatgaa
gtcatcgtaacgggttacggcgcacaatcgaagcgaaacctgactggcaatattgccaaa
gtgggtgcccgcgatattgaaaatattccggttccgagtgttgaacaagctctgcagggg
aaggtggcaggggttcaaattacatctctgaatggtaaagtggggcaggggctgcaaatt
cgggtgcggggtgcgtcgtcgctcacggccagtagtcagccgttgtatgttatcgacggt
attcccatgacatcggccgatcagtcgtcgacaacagcgccaaccaaccccatcgccgat
ttgaatcccaatgacatcgagtcgatggaaatcctgaaagatgcttcatcggcggctatt
tatgggtcgcgggcgtcgaatggcgtggtgctgatcacgactaaaaaaggacgtgcggcc
aaaacgacgttcgacgcgtcggcacagatgggcgccagcaatcctacgcacctgcgtcag
tggctcaacacgcagcaatatgtggaactgttgcaggaagcgcgggaaaatacaggcgct
acttcggccacttcactggccaaccgatttacccgctatgccgctggtgacgcaacgggc
tggcagggtgccaacccaaaatacaatactgattggcagcaggaggcctttcaaaaagca
ccttcgcaacaatacgacctcagtgcacggggtggtgatgccaaaactcggttctttatt
tcgggacagtatttcgaccagagcggaattatcatcaagaaccgttttcgccggttgagc
ggtcgggtcaatctggaccatacggccaccgaaaaactgactttgggcgtaaacatgaac
atctcgcactcgatcaacgaccgtgtttcaaacgacaacgccttctcgacaccgatgcag
attgtggccctgtcgccgatgtcaccggttatcgacccgcgcaccaatcgccttagtggt
gccgatcctgatttgtttccaagttatccgctgtattataatccgctgatcaaccgcgat
tatgccgcgttgcaggcgcgggtgtaccgtgtgatcgggaacgtatatgccgattataaa
ctgctgccgggtttgtcgttccgcaccgagtttggaaccgacctgttgagccagcaggaa
gaagaatattatggtcgtgaaacgcgggctaataccggcgcacccaacggtctgggttcg
aatacattccgtcaggtatccaactacaccactaacaactatttctcgtttgggcggacc
tttgccgaaaaacacgatgtcgatgctaccttgggtatgtcgtatcaggagtcgcggaac
aactacaattcggtaacgggtcagcagtttccaagtagtgcctataagcaagttacatca
gccgccaaaatcacggcgggcgacgggcaggaaacccgtttcagcttcctgtcgtacttt
gccagggtcaattaccgattcaataaccgctatttactgggagcatcggcacggattgat
gggtcgtcacggtttggtgccaatgacagatatggctttttcccggcagcatcagcaggc
tggattcttaccgaagaaccattcctgaaaaatgtcaaggcactgagccttctaaagttg
cgggccagttatggcttaaccggaaatgctgaaatcggtaattttagctcgctggcactg
tatgcggccacgaacaatgcgggtacatcggctgggtatgccggcgtgccggggcaggct
ccttcgcagattcccaaccccgacctgacctgggagaaaacgctccaaaccgacgttggg
ctggagtttggtttccttaacaaccgttttaccggcgaaattgactactatcagaaaaac
acgagtggtttgctgctcaacgtaaacgtgccgggctcgtcgggattccggacgcaattg
cgcaacgtgggtagactggagaacaaaggattcgaattcgttttcaactcgaataacttc
accggaccatttaagtggacgacctcgctcaacatcgcctataacaaaaataaaattacc
gatctgggcggtactaccattacgggtagcttcctgaaccgggcgcaggaaggccagccg
ataggggtgtttgttggccctgaatatgcgggtgttgatgtacagaatggtgatgcgctt
tattacaaaaactcgacaaatgccgatggtacactagatcgcacaaccacaaacgactat
aacagtgcggcttatgtgccgctgggaagcccaacgcccaagttcattggcggtattacc
aacaccttcagctttgctggtatcgacctgagcgtgttgttcaacggtcagtttgattac
tacatctacaatgggggcggtaaattccagtcggccaacggtgattatttcgataaccag
tcggtcgaccaattgaatcgctggaagaaaccaggtgacattaccaacgtgccccaggct
cgtttgctgggcggaaatggtaccggcgaatcgtcccgctatctgcaaaaaggggattat
gtgcgccttcggaccattacacttggctatacattgccaaaagccttgctgaatcgtatt
cacctgacgagagtcagagtttttgctacgggacagaatttgctgacattcaccaaatac
accggttgggaccccgaagtcaactcggacgcttactcctcgaatccggtcaaccttggt
atcgacttctactcagcgccacagccgcgcacgatcattggtggtttacaaattggtttt
taa
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