Spirosoma pollinicola: CWM47_29735
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Entry
CWM47_29735 CDS
T05236
Name
(GenBank) DNA replication and repair protein RecF
KO
K03629
DNA replication and repair protein RecF
Organism
spir
Spirosoma pollinicola
Pathway
spir03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
spir00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
CWM47_29735
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
spir03400
]
CWM47_29735
DNA repair and recombination proteins [BR:
spir03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
CWM47_29735
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
AAA_15
AAA_21
AAA_23
AAA_27
AAA_29
SbcC_Walker_B
ATPase_2
ABC_tran
NACHT
AAA_16
AAA_30
cobW
Motif
Other DBs
NCBI-ProteinID:
AUD05658
UniProt:
A0A2K8Z740
LinkDB
All DBs
Position
complement(7054415..7055539)
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AA seq
374 aa
AA seq
DB search
MHLEKLSLTNFKNYEDARYVFGQQVNVIVGPNGSGKTNLLDAVYFLSLSKSAFQTQDALS
ILHDADYFIIDGVFEEHDDRNAHPGRTQITISLQRGQRKVLMADKKPYERISEHIGRFPV
VLVAPNDTDLVREHSEDRRHFFDGVLSQLDPNYLRDYLMYQQVLKQRNSLLKLFAERSQV
DNDLLDTYDEPLLDLGQKIHNRRQQFIQEFLPSFRLHYAFLSDEREEVSIQYESEVSNPG
FADEFRHFRRRDTVLQRTTMGVHKDDYTFVIGGGNNQPAVPLKKFGSQGQQKTFVIALKL
AQFDQLQAEKGVKPILLLDDIFDKLDDRRIGKLIQQMDEGAFGQLFITDARPERTRELLN
NVKADVRFFEISHD
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
atgcacctcgaaaagcttagcctgaccaattttaagaattatgaagatgcccgctatgta
tttgggcaacaggtaaatgtaatcgtagggccgaacggaagcggtaaaaccaacctgtta
gatgcagtttattttttatcattaagtaagagtgcattccaaacgcaggatgcgttgagc
attctgcacgatgccgattattttatcattgatggtgtttttgaagagcacgacgatcgg
aatgcccacccaggccggacacaaataacgattagcctgcaacggggccaacggaaagta
ctaatggccgataaaaagccatatgagcgtataagtgagcacatcggccggtttccggtt
gtgctggtagccccgaatgatactgatctggtgagggagcatagcgaagatcgccggcat
tttttcgatggtgtactctcccaactcgacccgaattacctgcgcgattacctgatgtat
caacaggtgctcaaacagcgaaacagtctgctcaagctttttgccgaacgcagccaggtg
gataatgatctgctggacacctacgacgaaccactactcgatctgggtcaaaaaatccat
aaccgccgacaacaatttatccaggagtttctgcccagcttcaggctgcactacgctttc
ctaagcgatgagcgcgaagaggtgagtattcaatatgaatcggaagtgagtaatccggga
tttgccgatgagttccgacactttcgtcggcgggacaccgtgttgcagcgcacgacgatg
ggcgttcataaagatgactatacgtttgtgattggtggaggcaataaccaaccggccgta
cccttaaagaaatttggttcgcaggggcagcaaaaaacatttgtgattgcccttaaactg
gcgcagttcgaccagctacaggctgagaaaggtgttaagcctattttgctgttagacgat
attttcgacaagctggacgaccggcgcattggcaagcttattcagcaaatggatgaagga
gccttcgggcagcttttcattacagatgcccgtccggagcgaacacgagaattacttaac
aacgtaaaggccgatgttcgcttctttgagattagccatgattaa
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