Spirosoma pollinicola: CWM47_32995
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Entry
CWM47_32995 CDS
T05236
Name
(GenBank) hypothetical protein
KO
K20276
large repetitive protein
Organism
spir
Spirosoma pollinicola
Pathway
spir02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
spir00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
CWM47_32995
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Big_9
Cadherin_5
Cadherin_4
CshA_repeat
Motif
Other DBs
NCBI-ProteinID:
AUD06240
UniProt:
A0A2K8Z8R4
LinkDB
All DBs
Position
complement(7798988..7806586)
Genome browser
AA seq
2532 aa
AA seq
DB search
MAPCRTGKTSIRLYRQLGWGINCMKQDYYYYHTRKNPIQGLSSLELANQRPVPIWLDNEE
FLQGNKANRRFMKLLSTRPGRWLDYVRFNGSSLAFKSIAMLFMGLLALGQMSYAQTCNIV
TNGTFAGGTSTGWTSSGGWQFQTSPAVRAFNNTDGAVNQDLSQTLTGLNGGPVAHQVTVS
FDLILQQAGQDATAITQASLQVLLNGVVYATFNNPTATGAATGKVTVTMANGASISGFDN
LQFPGGTTGNSVTDAGIAIVIPWPAGSPNNAALTFRFNSPYSNSSGGTVASGTGNGQGGD
DFGLENVGSTGNAASAPTLSSGSIAISCPAATANINSLLTSTATGILWYTNNAHTGTAYA
TPTAAVAGTYYGFYNTSGCYTPASVAVSVTGVCITCTAGTTAPILSASTKANTCPATTVD
LSTLTASNTPANTALAWFTAPTATSANAVSNPASVAAGTYYAAFYDSVSKCYSPTTAVTA
TLKNCLDSDNDGIPDVDDLDDDNDGIPDTIESGIACVGGDGNVNYKSWTLAELASGNAFF
TSTTLHRNSPTGTLKYGDFPDFTASAATTSGTIPVVFGQTPWVDVPNGGADPNDGNFTQI
EGFISLPCYSTSLKIRTLASGSPASVGTVRETFTTLHLALDASGNPTFNTTDLKEVSYQK
VDFNGNIVNSTEYTFANTTSSGQWVRFGDAISDGADYYGAIIQWNVDGTGWVNVPASAFS
STSTGLIAGCASLDSDGDGIVNSLDTDSDNDGCSDAYEAGATTSKIANFQFPAASVGTNG
LTNLKETVADNGILNYTPTYTQLALASFLNACADSDGDGISDLADLDDDNDGILDAVEAP
DCYYTATEANTIQAISSIYPAPEPFQELYDGLATKLFNFTGSTMVVGDAIFTIVYPTAVK
LTSISVSDNITTITATRARLDGSKDGVTWLELTSADVNLSTSPVVFTANSNIGEYQYYRI
RNTIGGNLTTGNTIGEITSVLDASYIPSLHPKSVCTADTDGDGIFNSLDLDSDGDGCPDA
IEGGAAFKIGNITPVGALTGTVSSATATYGVPTQAGAGQTIGSSQNAAVKDIDCTVPPTL
MITGPANLTTTNTNPPVSGTATPGASVTVNGQNGQKCVTTADAITGAWTCSSLTFTVGSQ
TVTAVASNTAGVSNTAAASFTVVGCAFPAVGGTATYAGGAICPTNNAGTITLTGQTGGVV
KWQTSTDGGTTWVDLPNSATNKYYTFYNAVNNQQYRAVLNTGGAGCPDAYSNPATITTSA
GACTSPTCDKTAGTIVFGATPAVSGSNYTNMMVLINASGLIQYISAPGSPSLTGVAAGDY
FVYQITYDNTVTPLPTISTGINLSAIGGACVALSNQLAVKVCPASLPPVVKPDIATTNIN
TPVSGNVLTNDTDPNAGGSLTASLLGQPTSGTVTMNPNGSYTYTPPTGFTGVASFCYSVT
NTAGLSSSACAAITVVPGPSLIYNNAPIANNDNSQVTSGQSVTINVAANDTDPDSATSLN
GQLNTPTLGSPSVGTASLNPDGTVKYTAPANFTGVVTLPYTICDKGTPPLCSSAIITINV
QPTPPVGTTLSPIAGDDALITTINTPKTGTVAANDSDPNSPALPLTYTTGQPASGTVIMT
PTGSYTYTPAPGFVGPASFTYNVCNSAGKCAAATVNVDVLVPVALPPVATPDIANTNPDT
PVSGNVLTNDSDPQNQPLVATLLSQPTSGTVVLNPNGTYTYTPPSGFTGVASFCYSVSNT
AGLSSSACVTVNVNPVPSPNPAVDNAPIANNDNTQTTAGTSVTINVAANDTDPDSATTLN
GQLSAPTIVSQPSVGVASVVNGKVVYTPPANFTGVVSFPYSICDKATPALCATAVVTVNV
QPTPPVGTTLSPVAVDDALLTTKNTSATGTVAANDSDPNSPALPLTFTSGQPAHGTVVMG
PNGTYAYIPATGYTGPDSFTYTACNTAGKCDVATVSVSVQPSTVTNPPVIIGQPIVTDQG
NPITVCLPIIDADHLDSHTASICAQPGSGTATVVVNNTANTACVTYTPATTFTGATTVCI
QVCDSQGNCVQTIIPITVIPTSQTIALPQPPVVVVVPIVTPKDSTAQVCMTIVDPNMGDV
QSVTLCSSPTKGSVTATVNNTTNQVCVLYKPTPGSVGPDAVCLLVCDQSGLCTQVTVPVT
IVDPTPPGTTPVAPVVTPTPIVVTAGQAITVCTAITDNVGDTHTATLCGQPASGVAQVGV
NNVTHALCVTYTPGSTAPLNTTVCIQVCDQGGLCTTVILPITVLPAPKALLLPHVWLQGA
LFGVTSPTGLMRDDLRVKKYLPASSPYSSWTSITTVGPVSNTATVFGVTGNDAIVDWVFV
ELRSPSNFSLVVDSRPALVQRDGDIVEIDGTSAVAFSAVQGSYYVSVKHRNHLGVMTASA
VPLSVTGTSVDFRTSATGTYRVTTSAINQSQVTVAQGVALWGGNVVYDKSVIYQGTTNDV
SAIANQVKGPLNIAGNPSYILSGYYTGDVNLDGRTIYQGTGNDVNYIYLNVTKNHPGNAA
GQNFFVIREQLP
NT seq
7599 nt
NT seq
+upstream
nt +downstream
nt
atggccccctgtcggactggaaaaacttcaatccgattatatcggcagttggggtggggg
attaactgtatgaagcaagactactactactaccatacacgaaaaaacccaattcagggg
ctatccagcctggaattggcgaaccagcggcctgtaccaatctggctggataatgaagaa
tttttacagggtaacaaggcaaacagacgctttatgaaattactttctacacggccgggg
cgttggctggattacgttcggttcaacgggtcttcgcttgcatttaagtcaatcgccatg
ttgtttatggggctgttggcactggggcaaatgagctatgctcaaacctgtaacattgtt
acaaatggaacgtttgccggtgggaccagcacgggctggacatcatcgggcggttggcag
tttcaaacgtcgcccgctgttcgtgcgtttaacaacacggatggggctgtcaatcaggac
ctgtcgcagacgctgactggcctgaatggaggccctgttgcgcatcaggtaactgtgtcg
ttcgacctgatcttgcagcaggccggtcaagatgcaacggctattacccaggctagctta
caggtgttgttaaacggcgtggtctatgccacatttaataatccaacggcaacgggagcc
gctaccggaaaggtgacggtaaccatggccaatggggccagtatctccggtttcgataac
cttcagttccccggtggaactacaggtaactccgtaaccgatgccggcatagccattgtt
attccctggcctgccggcagcccgaataatgctgccttaacgttccggtttaactcgccc
tactccaatagttctggtggtactgtggccagtggcactggtaatggtcagggaggagac
gattttggcctggaaaacgttgggagtactggcaatgccgccagcgccccaacgctaagt
tcgggatcaattgcgattagttgcccggctgcaaccgccaatatcaacagcctgttaacc
agcacggcaaccggcattttatggtatacaaacaatgcccataccggtacggcctatgcc
accccaacggcagctgtggccggtacgtattatggattttataataccagtggctgttat
acgcccgcttccgttgctgtttccgttacgggcgtctgtataacctgtaccgccggtaca
actgcgcctatactctcagccagcacaaaagccaatacctgcccggctaccacggtcgat
ttgtcaacccttacggccagcaacacaccggctaacaccgcgctggcatggtttactgca
ccaacggctaccagtgccaatgctgtgagcaacccggcttcagtagcagcaggtacctat
tatgcggctttctacgattcggtcagcaaatgttatagccctactacggccgtaacagct
acgcttaagaactgtcttgacagtgataatgacggtattcctgatgtagatgacctcgac
gacgataacgacggtattcccgacacgatagaatcaggaattgcctgtgtgggcggtgat
gggaatgtgaattacaaaagctggacactggctgaactggcatcgggtaatgcgtttttt
acgagcacgacgctgcaccgaaacagcccgacaggtacgcttaaatatggcgattttccg
gattttacagcctctgctgctacaaccagcggtacgattcctgttgtattcgggcaaacg
ccatgggttgatgtacccaatggcggggctgatcccaatgatggcaactttacccagatc
gaagggttcattagcttgccctgctatagtacgtcgctgaaaataagaacgctggccagt
ggttcgcctgcttctgtcggtaccgtgcgggaaacattcaccaccctgcatctggcgttg
gatgcctcgggaaatccgacattcaataccacagatttaaaagaagtctcgtatcaaaaa
gtcgacttcaacggcaacatcgtcaacagtacagaatacaccttcgctaacactacctca
agcggacagtgggtgcgttttggcgacgccatatccgatggtgccgattattacggggcc
atcattcaatggaatgtcgatggcaccggctgggtcaatgtgcctgcatcggcctttagt
tcaacctcgacgggcttaattgccggttgcgcaagcctggattcggatggcgatgggatt
gttaattcgctcgatacggacagcgacaacgatggctgttccgatgcctacgaagcgggt
gcaacgaccagtaaaatcgctaactttcagtttccggcagcatcggtgggcaccaatggc
ctgactaatttaaaggaaaccgttgccgacaatggcatcctcaactacacgccgacctac
acacaattggccttggcgtcgttcctgaatgcctgcgccgattcggatggcgacggtata
agtgatctggctgatctggacgatgataacgatggtatcctcgatgccgtagaggcaccc
gactgttattacacggctactgaagccaacaccattcaggctattagctccatttacccg
gctcccgaaccttttcaggagctgtatgatggcctggccactaaacttttcaattttaca
gggtctacaatggtggttggcgatgcgatttttacgattgtataccccaccgctgtaaaa
ctgacatcgatttcggtatcggataatatcacaaccattacagcgactcgcgcccggctc
gacggttcaaaggatggtgttacctggctggaattgaccagtgcggatgttaacttatcg
acttcgcctgttgtatttactgcgaatagtaatattggtgagtaccagtattatcgcatt
cgtaacacgataggcgggaatttgactaccggcaataccatcggcgaaatcacgtctgta
ctggatgccagctatatccccagtttgcatcctaaatcagtctgtacagcagacaccgat
ggcgacggtattttcaatagcctcgacctcgactctgatggcgatggttgcccggatgcc
attgaaggcggagcggcttttaaaataggcaacatcacccctgtcggtgccctgacgggt
acggtctcgtcggccacggctacctacggcgtacctactcaggccggagcagggcaaacc
attggcagcagccagaacgcagcggtgaaagacattgattgtactgtgccaccaacactc
atgattactggcccagccaacttgaccactaccaacaccaatccaccggttagcggcacc
gccacaccgggcgcttctgttacagtgaacgggcaaaacggacagaaatgcgtaacgact
gccgatgcaattaccggagcctggacctgtagtagcctgaccttcacagtgggttcgcaa
acggtaacggccgttgcaagtaacaccgcaggggtgagcaatacagcagcagccagcttt
acggtcgtgggttgcgctttcccggcagtgggtggcacagcaacttatgccggcggggcc
atctgcccaaccaataacgctggtaccattacactcacgggccagaccggcggggttgtc
aagtggcaaacctctaccgatggcggcacgacctgggtcgatctgcccaatagcgccacc
aacaaatactataccttctataatgccgtcaacaaccagcaataccgagccgtactgaat
accggtggagccggttgcccggatgcgtactcgaatccggcaacgatcacgacaagtgcc
ggagcctgtacatcgcccacctgcgataaaacagcgggtactattgtcttcggtgctaca
ccagccgtatcgggcagcaactatacgaatatgatggtgctgatcaatgcgtcgggcctg
attcaatacatctcggcaccaggcagcccctcgttaacgggcgtcgctgcgggcgattat
ttcgtgtatcagattacctacgacaacacggtaactcccctgccaaccattagcaccggt
atcaatctgtcggctattggcggtgcctgcgtggcgttgtccaaccagttagccgtgaag
gtctgtccggctagtctgccacccgtagtcaagccggatattgcaacgacgaacatcaat
acgcccgtgtcgggtaatgtgctgaccaacgacaccgatccgaacgcgggcggttcgcta
acggccagtctgcttggtcaaccgaccagcggcaccgtaacgatgaatccgaatggcagt
tacacctatactccgcccacgggctttacgggtgtggcgagtttctgttactcggtaacg
aatacggcagggttgagtagttcggcctgtgcggctattacggtggttcccggtccgtcg
ctcatctacaataacgcgcctattgccaacaacgacaatagccaggtgacatcgggtcag
tcggttacgatcaacgtagccgccaacgataccgatcctgacagtgccaccagcctgaac
ggacaactgaatacgccaacgttggggtcacccagtgttggaacggccagcctgaacccc
gatggtaccgtcaagtacacagctccggccaacttcacaggtgtggtcacgctcccatat
actatatgcgacaaaggcaccccaccgctttgttcatcggccataataacgatcaacgtt
cagccaacgccaccggtgggtacgactctatccccaattgcgggcgacgacgcgctgatc
accactatcaatacgccgaaaacgggtacggtagcggccaacgacagcgatcccaacagt
ccggcgttgccgctaacctatacgaccggccagccagcttccggcacagtgattatgacg
cccacaggttcgtacacctacacgcccgccccgggttttgtagggccagcgagttttacg
tataatgtgtgtaattcggctggaaaatgtgcggctgccaccgttaatgtggatgtattg
gtgcctgtggcgctgcctcccgtggctacacccgacattgccaacaccaatcccgatacc
cctgtatcgggcaacgtgctgaccaatgacagtgatccgcagaatcaaccgctggtagct
accttgctgagtcagcccacatcaggtacggtggtactcaatcccaacgggacttacacc
tatacgccaccctcgggcttcacgggtgtagcgagtttctgttacagcgtgagcaacacg
gcggggctgagcagcagcgcctgtgtaacggtgaacgtcaacccggttccctcgcctaac
ccggcggtggacaatgcacccattgccaacaacgataacacccagactacggcaggtacg
tcggtgaccatcaatgtggcggccaacgataccgacccggattcggccactacgctgaac
gggcagttgagtgcaccaacgattgtgtcgcagcccagtgtgggagtggccagtgtggtg
aacgggaaagtggtctacacgccaccggctaatttcacaggtgtagtgagtttcccgtat
tcgatttgtgataaagctaccccggcgctctgtgccacagcggtggtgacggtgaatgtg
caacccaccccaccggtaggtacgacactgtcgccggtggccgtggacgatgcgctgctg
acgacgaagaatacgtcggccaccggcacagtagccgctaacgacagcgatcccaacagt
ccggcgttgccgctaacctttacgtcgggtcagcctgcccatggtacggtagtaatgggc
ccgaatggaacctatgcctacatccccgcaacgggatacaccggtcctgatagcttcacc
tacacggcctgcaacacggcgggcaagtgtgatgtggcgacggtatcggtgagcgtgcag
ccttcaacggtgacgaatcctcccgtaattattggtcagccaatcgttacagatcagggg
aaccccataacggtatgtctgcctatcattgatgccgatcatctcgacagccacacggct
tcgatttgtgcccagcccggcagtggtacggctacggtggtggtcaataataccgccaac
acggcttgtgtgacctacacaccggcaaccacgtttacaggtgcgacaacagtctgcata
caagtttgtgatagtcagggcaattgcgttcagaccatcattccgattactgtgatacca
acgagtcagacgatagccctgccccagccaccggtggtggtggtggtgcccatcgtgacg
cccaaagattcgacggcccaggtctgtatgaccatcgtcgatcccaacatgggtgatgtg
cagagtgtcaccctgtgcagcagcccaaccaaaggctcggttacagctacagttaataac
acgacgaaccaggtgtgtgtgctctacaaacccacaccgggcagcgtaggacccgatgcg
gtgtgtctgctggtgtgcgaccagagtggtctgtgtacccaggtgaccgtgcccgtaacc
attgttgacccaaccccgccgggtaccacgccggtggctccggtggtaaccccaacgccc
attgtggtgacggcggggcaggccattacggtctgtaccgctattaccgataacgtgggg
gacacccacacggccaccctttgcggtcagcccgccagtggggtggcccaggtaggggtt
aacaatgtgacccatgctttgtgtgtgacctacacgccgggtagcacggctccgctgaac
accacggtgtgtatacaggtgtgtgatcagggtggtctgtgcaccacggtgattctgccc
atcacggtgctgcccgcgccaaaggcgttgctgctgcctcacgtctggctgcagggtgcg
ctcttcggggtcacttcgccaacggggctgatgcgggacgatctgcgggtgaagaaatac
ctgcccgccagcagtccttacagcagctggacatccatcaccacggtgggtccggttagc
aacacggctacggtgttcggggtgacgggcaacgatgcgattgtggactgggtgtttgtg
gagctgcgcagcccgtctaatttttcactggtggtggattcacgtccggcgctggttcag
cgggacggcgacattgtggagatcgacggtacgtcggcggtggctttcagtgcggtgcag
gggagctactacgtgagtgtaaaacaccgcaaccacctgggggtgatgacggccagtgcg
gttccgttgagtgtaacggggacgagtgtggatttccgcacgtctgccacggggacgtat
cgggtcaccacgagtgcgatcaatcagtctcaggtgacggtggcccagggggtggccttg
tggggggggaatgtggtatatgataagtcggtgatttatcagggcacgaccaacgatgtg
tcggccattgccaaccaagtgaaaggaccgttgaacattgcgggtaacccaagctatatt
ctcagtggctactatacgggggatgtgaatctggatgggcgtaccatctaccaggggacg
ggcaacgatgtgaactacatctacctgaacgtcaccaagaaccatccgggtaatgcggcc
gggcaaaacttctttgtcatccgcgaacagttaccttaa
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integrated database retrieval system