Spirosoma pollinicola: CWM47_33555
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Entry
CWM47_33555 CDS
T05236
Name
(GenBank) TonB-dependent receptor
KO
K21573
TonB-dependent starch-binding outer membrane protein SusC
Organism
spir
Spirosoma pollinicola
Brite
KEGG Orthology (KO) [BR:
spir00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
spir02000
]
CWM47_33555
Transporters [BR:
spir02000
]
Other transporters
Pores ion channels [TC:
1
]
CWM47_33555
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CarbopepD_reg_2
Plug
TonB_dep_Rec_b-barrel
CarboxypepD_reg
CooC_C
Big_1
Dockerin_1
FG-GAP_3
TTR_TEN1-4
MG4
Motif
Other DBs
NCBI-ProteinID:
AUD06338
UniProt:
A0A2K8Z903
LinkDB
All DBs
Position
7934689..7937850
Genome browser
AA seq
1053 aa
AA seq
DB search
MNHIFTFLHSREYCCYALLFLSLISFNTPLLANKRDINNGLAADRSVTGIVVDAKNQALP
GVNIVIKGNSKGTTTDANGRFQLSIPDQGTILQFSYIGYVTQEVTIGNQTDVNVTLLEDT
KTLDEVVFVGYGTQKKADLTGAVSTVTSKDIGRLPVGGIDQALQGKAAGVRVTQSSGQPG
EAVSIRIRGVGTINDNSPLFVIDGVPTKDPGSLLNPNDVESMSVLKDASSAAIYGARSAN
GVVVVTTKRGKSGAPRISFNSYTGVQQHGRLIPMANTADYVRLYNEAANTDNAAIGDPTL
FRKLITADPNSLPNTDWQRAIFRTAPIQNYQLSISGGTDRSHYLISGNYFDQQGIILNSG
YKRYALRTSLDTDIKGKLKIGTNINMTYSNRSIVGSSGDGYGGNGGSIVRYALFHTPAVS
VYDSTGNFTDLPARPDLYGDGYNPVGLASKQDNKQNQYRVFGNLFAEWQITKELRFRSDG
GLDISVVNQKIYNENWGTNGRINSPATLSDHISTSTNLNWNNTLNYTHTFGLKHDLSALL
GMEAIQNIGRDLTGSDRNFIDQDPNLRYLGRGNDPLGRSASEGDQRWKLLSQFFRLNYAY
QNKYLVTVNVRRDGSSRFSPQNRYATFLSGSVGWNIDQEAFFQPLTNVVSALKVRASIGQ
LGNQDIGNYPYASIVGSGYNYPLGSPQQTNNGYAITSRGNSTVKWEASTQTDVGIDAGFF
QNKLQLNIDYFIKTTSDMLVPIPVPRSGGTSGVPYVNAGRVENKGLEIDLTYRNRVGAVS
FDITANGSFIRNKVTSLSDGRPIPGGRIDNGIFGTLTEPGYPIGSFYLLKQTGIFQTKEE
LFTSAFQGNNIQPGDVKFADMNGDGIIDQNDRSHVGSPIPTLLYGFTANVQWKGFDLSAF
FQGVSGNKIYYQVATDIEGFYRAFNVTQRVVDQHWTGEGTSSTQPRVSWRGAANNKQPST
RFLEDGAYTRLKNLQVGYTLPAKISQKIGSSMVRIYVAGQNLLTFTKYPGLDPEQQTSDN
VNNEQFRGDVAVGIDWGTYPSAKTYTVGLNVSF
NT seq
3162 nt
NT seq
+upstream
nt +downstream
nt
atgaatcacatctttacattcctacatagtagggagtattgttgttacgctctattattc
ctgagccttattagttttaataccccgttgctggccaacaaacgggatattaacaacgga
ttagccgctgaccgatctgttacaggtatagtagtcgatgctaagaaccaggcactgccc
ggtgtgaacatagtaataaaaggcaattcaaagggcactacaaccgatgccaatggccgc
tttcaactgagtattcccgaccagggaaccattcttcaattttcgtatataggctacgtt
acgcaggaagttacaatcggcaatcaaaccgacgtaaacgtaacgttacttgaggatacc
aaaacactcgatgaagtagttttcgttggctatggaacacaaaagaaagccgacttgact
ggtgctgtttcgacggttacgtcgaaagatattggccgattgccggtgggtggtattgat
caggcgttgcagggaaaagccgccggggtgcgggtaacgcagtcctcgggtcagccggga
gaagcggtgtcgattcgtatccggggcgttgggacgatcaatgataatagtccgcttttt
gtcatcgacggcgtaccgaccaaagatccgggcagtctgctgaatccgaacgatgtcgaa
agtatgtcggtattaaaagacgcatcgtcagccgcgatctacggagcccggtcggcaaac
ggtgtcgttgttgtgacgaccaagcgtggcaaatccggggctccgcgaatttcctttaac
agctatacaggggttcagcaacatgggcgattgattccaatggccaacaccgccgactat
gtgaggctatataacgaagcggcaaacaccgacaacgcggccatcggcgatcctaccctg
tttcgaaaactcatcacggcggacccaaattcactaccgaataccgactggcagcgcgct
atttttcgcaccgctcccattcagaattaccagttgtcaatcagtgggggcaccgatcgg
tcgcactacctgatttcgggaaactacttcgatcagcagggtattatcctgaactcaggc
tacaaacgctacgcactacggacgagtttagatacggatattaagggtaaactgaagatt
gggacgaatataaacatgacttattcgaaccgcagcattgtgggtagctcaggcgacggc
tatgggggtaatggggggagtattgttcgatatgcactgtttcatacgcctgccgtttct
gtttacgactcgacaggaaatttcactgatttacccgcacgccctgacctatacggcgat
gggtataacccggttgggctggccagtaagcaggataataagcagaatcaatatcgagtc
tttggaaacctgtttgccgagtggcagattacgaaagagctgcgttttcgttcagatggg
ggcctggatatcagtgttgtcaatcagaaaatttacaacgaaaactgggggacaaatgga
cgcatcaacagtcctgctacgctgagcgatcacataagcaccagcacgaatctgaactgg
aataatacgctgaactacacccatacctttggcctgaaacacgacctgtcagccctgttg
gggatggaagccattcaaaatattggtcgcgatctgaccggctccgaccggaattttatt
gaccaggaccccaacctgcgctatctcggtcggggtaacgatccgctgggccgttcagct
tcggaaggcgatcagcgctggaaactgctttcgcaatttttcagactcaactacgcctat
cagaataaatatctggtaacggtcaacgttcggcgggatggctcctcgcgcttttcgccc
cagaatcgttacgctacgttcctttcgggctccgttggctggaacattgatcaggaagcc
ttttttcagccactcactaatgtcgtgtcggcgttgaaagtgcgggccagtattgggcag
ttggggaatcaggacattggcaattatccctacgcgtccattgtcgggagtggctacaac
tacccgctgggaagtccgcagcagaccaataacggctacgcgatcacaagtcggggcaat
tcgactgtgaaatgggaagcctcgacccaaacagatgttggtattgatgccgggttcttt
cagaataaattacaattgaatatcgactatttcatcaagacgacctcggatatgctggtg
ccgattccagtgccgcgttcgggtggtacgtcgggggtgccgtatgttaatgcaggtcgc
gtcgaaaacaaagggctcgaaatcgatctgacgtatcggaaccgggttggagcggtgagt
ttcgacataacagccaatggatcgtttatacgcaataaagtaacctcgctcagcgatggt
cgacccattccgggtggccgaattgacaatggcatattcggtacgttaacggagccgggt
tacccgattggctccttttatctgctaaagcaaacaggcatttttcagaccaaagaggaa
ctgttcaccagtgcctttcagggaaataacattcagccgggcgacgtaaagttcgccgat
atgaatggggatggaattattgatcagaatgaccggtcgcacgtgggtagcccgattcca
acgctgctatacggctttacggctaatgtgcaatggaaagggttcgatctgtcggcgttt
tttcagggcgtatcgggcaataaaatttactatcaggtggctaccgatattgaaggcttt
tatcgggcattcaatgtcactcagcgtgtggtcgatcagcattggaccggcgaaggtacc
agcagtacccagccgcgtgtgtcgtggcggggagctgccaataataagcagccatcaacg
cgctttctggaagatggggcctatacacggctgaaaaacctgcaggtcggttatacgttg
cctgccaagatcagtcagaaaatcggctcatctatggtgcgtatctacgtagcggggcaa
aacctgctgacgttcacaaagtatccgggccttgatcctgagcagcaaacgagcgataac
gtcaataacgaacagtttcggggcgacgtagcggttggcatcgactggggaacctacccg
agtgcgaagacgtacaccgtgggattaaatgttagtttttga
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