Spirosoma pollinicola: CWM47_34130
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Entry
CWM47_34130 CDS
T05236
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
spir
Spirosoma pollinicola
Brite
KEGG Orthology (KO) [BR:
spir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
spir03032
]
CWM47_34130 (topA)
03400 DNA repair and recombination proteins [BR:
spir03400
]
CWM47_34130 (topA)
Enzymes [BR:
spir01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
CWM47_34130 (topA)
DNA replication proteins [BR:
spir03032
]
Prokaryotic type
DNA Topoisomerases
CWM47_34130 (topA)
DNA repair and recombination proteins [BR:
spir03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
CWM47_34130 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
MUG2_C
SAS4
Motif
Other DBs
NCBI-ProteinID:
AUD06439
UniProt:
A0A2K8Z9D5
LinkDB
All DBs
Position
complement(8074635..8076842)
Genome browser
AA seq
735 aa
AA seq
DB search
MPVKKLLIVESPNKCKKISSILDKLYGAGVWKVVASVGHFRDLPLKSLGVHRDQGYGLSY
ELHPDKLKIVKDIKGLAQQVGIANCYLATDLDREGESISFHLAQILGIPISQTKRVTFDE
VTEKAIAAAVSNPRVLDMKLVSAQEGRRAIDRLTGYEISPLMSRKLGNRLSAGRVQSVAL
RLVVERERTIEAFKSKSDFRLKGEFLTPNGEGIKATYHQPFLTEEAIVSYLKASVQKTYS
VASIDVKPLVRQPSPPFTTSTLQQDAIRKLSKKAGRWSAKKVMEVAQELFAKGHITYMRT
DSPNLSQEAVEAIKEQVNTRLGASYFEARTFKAKQAAQEAHEAIRPTHFDHQQAGDTPDE
QALYELIYRRAMASQMKPALFEQTTIFITSADPQDLFTAVAKVEKFNGYLAVYDEETDEE
GEEETTSLKKIAKGDKLRCQKLIGRQTYSQPAKRYDEASLVRELEKRDIGRPSTYASIVG
TIQARDYVRTDSIPASKLPSVIFTLENNKLEKKVEQQTVGGDQSKLVPSSVGHQVTEYLE
ANFSKLVDYAFTASMEKRLDEVAGGKATYKQVVSEFDTDHQHLLQLADASQHDVVRTPSM
LEVGELNGEPVKTGKGKYGTYVLYKGEFLDARQYEPDQITLDLVVQLLEKKNQQLPQRHE
NLIHKVGKYEVRQGPHGQYVTDGKTNARLPHQITTTEQIKQLTSENCQAILNSYQTWKKS
QAGGKSQPKQVAKKG
NT seq
2208 nt
NT seq
+upstream
nt +downstream
nt
gtgcccgtgaaaaaactgctaattgttgaatcgccgaataaatgtaaaaagatcagttcc
attctcgacaaactctacggagctggcgtttggaaagtcgtcgcttcggtgggtcacttt
cgggatctgcccctcaaatcattgggcgtccatcgggaccagggatatggcctgagctat
gagctgcatcctgataaactgaagatcgttaaggacatcaaaggcctggctcagcaggtc
gggattgccaactgttatctggcaacggatttggaccgggaaggagagtctatatcattc
cacttagctcaaatcctcggtattccgatttcccagaccaagcgggtgaccttcgacgaa
gtcaccgaaaaagcgattgcagcagctgtttcaaacccgcgggtactggatatgaaactg
gtaagtgcccaggaggggcgccgggcaatagatcggttgacaggctacgagatttcacca
ctcatgagccgcaagctaggcaaccggctaagtgctggccgggtccaatcggtagccctg
cgtttagttgtggaacgcgagcgaaccatcgaagcttttaaatcaaaatcggatttcaga
cttaagggggaattcctgacaccaaatggtgaagggatcaaggcaacctaccatcaaccg
tttctgacggaagaagctattgtttcgtacttaaaagcctccgtacagaaaacgtattcc
gtggccagcattgacgtaaaaccattggtgcgtcaacccagtccaccttttaccacctcc
accctgcaacaggatgcaatccggaagctcagtaagaaagcgggacgctggtcagccaaa
aaagtaatggaggttgctcaggagttatttgccaaagggcatatcacgtatatgcgtacg
gattctcctaatttatcgcaggaagccgtcgaggccattaaagaacaggtgaatacccgt
ttaggcgcatcctattttgaggcaagaaccttcaaggccaagcaagctgcacaagaggct
cacgaagccattcgaccaactcactttgaccatcaacaagctggtgatacgccggatgaa
caggcgctttacgaactgatatatcgtcgggctatggcttcccagatgaaaccggccttg
tttgaacagactacgatattcatcacctcagctgatccacaggatttatttacggccgta
gccaaagtggaaaagttcaatggatacctagccgtttatgacgaagaaaccgatgaagaa
ggggaagaagaaacaacatccctgaaaaaaattgccaaaggagataaactacgctgtcag
aaactcattggccgacaaacctacagccaacccgccaaacggtatgatgaggccagtctg
gttcgtgagctggaaaaacgggacattgggcgcccatctacgtacgccagcattgttggt
acaattcaggctcgtgattacgtgcgtactgattctatcccagcctcaaagttgccatca
gttatttttaccctggaaaataataaactggaaaaaaaagtagagcaacaaaccgttggc
ggtgatcaaagcaaattagtcccgagttcagtgggccatcaggtaactgaatatctggaa
gctaatttcagcaaactggtcgattacgcgttcacggcttccatggaaaagcgtctggat
gaagttgccggtggaaaagctacttataaacaagtagtgagtgagtttgatacggatcat
cagcatttgctgcagttagcggatgcatctcagcacgacgtcgtccgaactccatcgatg
cttgaagttggagaacttaatggagaacccgtaaaaaccggcaaggggaagtacggtact
tacgtcctgtataaaggggaattcctggatgcacgccagtatgaaccagatcaaattacg
ctggacctggtcgtacaattactggaaaagaaaaaccagcagctcccgcaacgtcatgaa
aatttgattcacaaagtaggaaagtatgaagtccgtcagggtccacatggccagtacgtg
actgatggtaagaccaatgcccgtttacctcatcaaattaccaccaccgagcagatcaag
caactgacaagcgaaaactgccaggcaatactaaatagctatcaaacctggaaaaaatcg
caggcaggaggcaagagccaaccaaaacaagttgccaaaaaaggttga
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