Spirosoma pollinicola: CWM47_36465
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Entry
CWM47_36465 CDS
T05236
Name
(GenBank) TonB-dependent receptor
KO
K21573
TonB-dependent starch-binding outer membrane protein SusC
Organism
spir
Spirosoma pollinicola
Brite
KEGG Orthology (KO) [BR:
spir00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
spir02000
]
CWM47_36465
Transporters [BR:
spir02000
]
Other transporters
Pores ion channels [TC:
1
]
CWM47_36465
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
CarbopepD_reg_2
CarboxypepD_reg
STN
Dockerin_1
AglB_core-like
TTR_TEN1-4
Motif
Other DBs
NCBI-ProteinID:
AUD06863
UniProt:
A0A2K8ZAG1
LinkDB
All DBs
Position
8547222..8550593
Genome browser
AA seq
1123 aa
AA seq
DB search
MKKSIPLKNVLFYIMRLSLVQLVLIALFTSFALARNGYGQDLLNRRITLQVTNQKVETIL
DKLAKASGIRFMYSPELIQAGRATSLKVKDVKLAIVLNELLTPLKITYEVSGDQVLLKRM
PLFGQQQVIETTPRFLTEKNADVVVAGQVIDNTGGTVPGATIVLKGSGSIGTTTDANGQF
KLNLPESGAHTLVVSSIGYVTQEVLVNNRTRLEIVLVTDVKSLNEVVVVGYGTQRKGDVT
GALTSISAENFKDQPVTRLDQALQGRAAGVQVTSSAGAPGGDVRIRIRGSNSINGDNSPL
YVVDGFVGADFNNINAQDIASMEVLKDASATAIYGSRGANGVIIITTKGGSKKGMQVNFN
TRISTSEVLKKINTLNAADFAQVVNERQAATGGNPIYTPAQIAGYQQNSGTNWQDQILRK
AVGQEYQLGVSGGNEKTTYLISTNYLNQNGIINNSDYKRYAIRSNIASQISDKFSVRLNF
TGTRRENHNTGGTAARSGALAQAFAWAPTTPVQDADGNYTYRDPVGSIFENPVALTTDAD
NRTNSTTANLIGGVRYEFVPGLALDVQYGVNYNNQQGKYYSGPVIANRLPRASRTSGEQI
TLQNTNTLTFKRVFNTIHRLDITGVFETQQQTGESFYANAANLTYPAQSFNNLALAESNQ
IGSGYGKWSLLSYLGRVNYALKDRYLVSATVRRDGSSKFQGKNRYSVFPSMALGWKLSEE
KFMQSQHLFSNLKIRGSWGLTGNQGINPYGTLSTYITNVDDAAVAFRSGYFTNGVTNGII
LGNPGNPDLKWETTEQINGGADMSFLNGKVTLSVDYFVKNTRDLLLNQPLPDYVGGNSIL
RNVGRVQNKGWEFSLEATPIDKNNFSWNTSLNVSLLQNKVVSLSSTSDTIYASNEFVLIP
GQSLTSFWGLRYMGTWKPNEADKATSYGEKPGDAHYQDLNGDGVINVADYQVIGNGQPRT
SLGWNNTFTYKRLSLNIFFQGLFDFSKLNYTYANGIVGSTDARQPTFADIKNRYIPGVNE
TSDIPAFSNVKENFYVQSTRFLEKGDFVRLKNISLSYNLPKSTLKNIGTVSVFVSATNLL
TFTQYKGIDPESTSNGSGDIGQNIDYGSYPNSKTITGGLSLTF
NT seq
3372 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaatcaatacccttgaaaaacgtgctattctatataatgcgccttagtcttgtt
cagcttgtcttaatagccctatttaccagcttcgcattggctcgtaatggctatggacaa
gatttacttaaccgccggataacgcttcaggtgactaatcagaaagtagaaaccattctc
gataaactagctaaagcctcaggaattcgcttcatgtacagtccggagttgattcaggct
ggacgagccacttcgcttaaagtaaaagatgtaaaactagcaattgtgctgaatgagttg
ctgacacctttaaagattacgtatgaagtgtctggtgatcaggtacttttaaagcgcatg
cctttattcggtcagcaacaggtgatcgaaactacgcctagatttcttacggagaagaat
gctgacgtcgttgttgccggacaggtaatcgataataccgggggtaccgttcctggagca
acaatcgtacttaaggggagtggttctattggtacaacgaccgatgccaatggtcaattc
aagttgaatctgcccgaaagtggtgcacatacgctggtcgtttcgtcgattggctatgtc
acacaggaagtgctggtaaacaaccgtacgcggctggaaatcgtacttgtaaccgatgtc
aagtcgttgaatgaagttgttgtagtggggtacggaacgcaacgcaaaggcgatgtaaca
ggagccttaacatcaatctcagccgaaaactttaaagatcagccggttacccgtttggat
caagcgttgcagggccgggcggccggcgttcaggttactagttcagctggtgcaccaggg
ggcgatgttcgtatccgtattcgaggctccaactccattaacggagataacagtccgctg
tacgtggtcgatggcttcgttggggcagatttcaacaacatcaacgcgcaggatattgcc
tcgatggaagttctaaaagatgcgtcagccacggctatttacgggagccggggtgctaat
ggcgtgattatcattaccaccaaagggggcagtaaaaaaggcatgcaggttaattttaac
acccgcatctcgacatctgaagtactcaaaaaaattaatacgctgaatgcagctgacttt
gcccaggtggttaatgagcggcaggcggcaaccggtggtaatccgatctatacaccggct
caaatcgcgggctatcagcaaaacagtggcactaactggcaggatcagatactccgcaaa
gccgttggtcaagagtatcaattgggtgtatcgggcggaaacgaaaaaactacgtaccta
atttcgactaactacctgaatcaaaatggtattatcaataactctgattacaagcgttac
gcgattcgctccaacatcgcttcgcagatttcagataagttttcggtacggttgaacttc
accggaacccggcgcgagaatcataacaccggcggtaccgctgcccggtcgggtgcactt
gcccaagcatttgcatgggcacctaccacgccagttcaggatgctgatggtaactatacc
tatcgcgacccggttgggtcgattttcgaaaacccggttgccctaactaccgatgccgac
aatcgcaccaatagcacaacggctaacctgattgggggcgtacgctacgagtttgttccc
ggcctggccctggatgtgcagtatggggtcaattataataaccagcagggtaaatattat
tccggcccagtgattgcaaaccgtttaccgcgcgctagccggacatcaggtgagcagatc
acgctgcaaaataccaatacgctgacgtttaaacgggtattcaataccatccatcggctg
gatataactggcgtttttgaaacccagcagcaaaccggcgaatcgttttacgccaatgca
gctaatttaacctatccggctcagtcctttaacaacttggcactggccgagtccaatcag
attggttcgggatacggaaaatggagtttgttatcgtacttagggcgggtcaactacgcc
ttgaaagaccgttatttggtgtcagcgacggttcgtcgggatggttcgtccaagtttcag
ggaaagaacagatatagtgttttcccatccatggcgctgggctggaaactgtcggaagag
aagtttatgcagtcacagcacctgttcagcaacctgaaaataaggggtagctggggttta
acgggtaatcagggcataaatccctatggaactctgtctacctatattaccaatgtggat
gatgcagccgtcgcgtttcgatcgggctatttcaccaatggcgtgaccaatggtatcatc
ctcggtaacccgggcaatccggatttgaaatgggaaacgacggagcaaataaacgggggg
gcagatatgtcttttctgaacgggaaagtaaccctttcagtcgactactttgtaaaaaac
acccgtgatctgttgttaaaccaacccttgccggactatgttggtggcaacagcattctt
cgcaacgtaggtcgggtgcagaataagggttgggaattctcgcttgaagcaacgccgatc
gacaagaataacttcagctggaatacttcattaaacgtttctctactccaaaacaaggta
gtgagtttaagttcgacaagtgatactatttatgcgtcgaacgagttcgtcctgattccg
ggacagtctctgacatccttctggggattacgctacatgggtacctggaaaccaaacgag
gccgataaggcgactagttatggcgaaaaacctggtgatgctcactatcaggatttaaat
ggcgacggggtgattaacgtagcagactatcaagtaattggcaacgggcagccaagaaca
tcgttgggctggaacaacacgtttacctataaacgcctgtcactgaacatcttctttcaa
ggtttatttgattttagtaaacttaattacacgtatgccaatgggatagttggtagtacg
gatgcacggcagccaacatttgccgatatcaagaaccggtatatacccggcgttaacgaa
acgtcggatattccggcgttcagcaacgtaaaggaaaatttttacgtgcagtcaacccgt
tttttggagaaaggtgattttgtacgcttgaaaaatatcagtctgtcgtacaatctgccc
aaatcgacgctgaaaaacattggtaccgtaagcgttttcgtgagcgcaaccaacctgctg
accttcactcaatacaaaggcatcgacccggaatcaacctccaatggctccggtgatatc
gggcaaaatatcgattatggatcgtatcccaattcaaagacgattaccggtggtttgagc
cttactttttaa
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