Stylophora pistillata (Smooth Cauliflower Coral): 111320751
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Entry
111320751 CDS
T05774
Name
(RefSeq) collagen alpha-1(I) chain-like
KO
K06237
collagen type IV alpha
Organism
spis
Stylophora pistillata (Smooth Cauliflower Coral)
Pathway
spis04382
Cornified envelope formation
spis04512
ECM-receptor interaction
spis04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
spis00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
111320751
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
111320751
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
111320751
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
spis04147
]
111320751
00536 Glycosaminoglycan binding proteins [BR:
spis00536
]
111320751
Exosome [BR:
spis04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
111320751
Glycosaminoglycan binding proteins [BR:
spis00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
111320751
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
111320751
NCBI-ProteinID:
XP_022779176
LinkDB
All DBs
Position
Unknown
AA seq
1557 aa
AA seq
DB search
MRFLVQFAAVFFVLCGWYLVNPPFVDAACQGCQSCVPKCIGEKGERGERGRAGLTGPPGL
PGFQGPEGLPGPRGNKGDKGEAGPNGERGPRGRVGPPGFPGANGNPGIPGEDGPRGMMGD
PGCNGTKGERGVPGNPGNPGPKGNKGLPGIIGMKGSKGSSATDVVGTKGDEGPKGETGDD
GVRGDQGVPGVQGPPGIKGNQGPAGPNGTKGEKGNQGIAIQGQKGKMGEKGIKGEKGKPM
NIGELKGNFTVITIKGGQGDRGEPGQAGSKGQKGEKGQSSPGPEGIQGPNGPKGEPGQKG
NQGETGQKGDPGENGPMGPKGEQGDDGPPGDRGLVGLPGSPGEAGQKGDKGSRGPAGVGP
PGPDGPKGDIGPPGFPGRSGPRGNIGNIGPTGPPGPPGPQGPRGDAGPPGPPGKVGDPGA
AGIKGSTGEPGPNGLPGPKGEKGGRGVTVFGPQGMDGAPGPRGDRGEKGSQGFPGPAGDS
SNGPPGPKGDQGPQGSPGEDGPKGSQGPKGEACLGCPASPQGPPGEKGTMGSPGQPGDSG
RTGNPGPQGDPGNPGPPGRSGRDGEPGQQGDRGDPGAIGPKGEKGEVIRVVGGKGAKGEP
GTDGPPGDQGPPGANGESGQPGERGPRGEPGIKGEKGLDGKDGKQGDTGLKGEKGLKGEQ
GQTVVGPKGIDGVKGEKGTAGEKGNLGAKGEKGDCLSLGQIKNMTKGEKGEKGFPGPEGP
TGDNGQPGAAGVSGESGPPGEPGMKGEKGDGSPGPQGPPGPQGGTGPPGPKGDTGIRGDK
GSPGPEGPSGSDGDKGDKGDIGSPGNPGVPGNPGKNGAQGDPGEKGERGRDGQRGKSGEK
GSIGPAGNPGDIGQTGPRGFPGDPGAKGDAVVGPRGPTGKEGPKGQPGLKGEPGQPGRDG
DPGDDGPSGDRGEKGTEGAAGPQGPEGPPGLKGEVGEPGNIGEKGLPGIPGGRGDKGDKG
SVGKSGEPGPEGVEGVKGEDGPPGRQGFPGRKGEQGMKGEEGPPGKSNATVIPGDKGDKG
DRGPAGPPGRNGDNGIDGAAGERGSPGDPGPEGPAGERGTPGTPGTRGLPGDRGLPGPPG
AEGKEGPKGQTGAAGPPGEQGPRGSAGDKGAQGSKGDVGLPGIGVKGEMGDRGPEGASGN
RGEDGKKGQPGEDGQPGPPGPPGPPGDQGDRGPKGDQGTTGETTVVQGPKGEKGQPGRNG
VDGTDGTNGEQGPPGQPGDQGPPGQEGARGDPGPIGPVGPPGPDGLDGGVGAKGDKGEEG
TAGQPGVKGDAGINGSAGQPGEKGAQGPPGEAGADGRPGLKGERGPSDFGFYVVRHSQTA
QLPDCPIDTVALWEGYSLLYVQGNERAHGQDLGQPGSCLPKFSTMPFLFCNLNENCNLAS
RNDYTFWLSTPEPIPMMPVVDSDIRPFISRCRVCEAPAMVMALHSQSMVEPDCPEGWDRL
WIGYSFLMHTSAGNDGAGQLLSSPGSCLEDFRTSPFIECHGRGTCHYYGSTYSFWLTTVT
DEEQFRTPKSKTIKSGNQREHVSRCTVCMKKVYSNNNGNGNGGGVVDPIVDPGDLPN
NT seq
4674 nt
NT seq
+upstream
nt +downstream
nt
atgcggtttttagtccaatttgccgctgttttttttgtattatgtggatggtatctggtg
aatcctccttttgtggacgcagcgtgccaaggttgccaatcatgtgttccgaaatgtatt
ggagagaagggtgaaaggggagagagaggaagggcaggattaactggcccacctggtctg
ccgggttttcaaggaccagaaggtctacccggtcccagaggtaataagggggacaaaggt
gaagcaggtccaaatggtgaaagaggaccaagaggacgagttggtccgccaggttttcca
ggagcaaatggaaatccaggtatacctggtgaagatggtcctcgtggtatgatgggggac
ccaggctgtaatggaacaaagggtgagcgaggtgtcccaggaaacccaggaaacccagga
cccaaaggaaataagggcttgcctggcattataggaatgaaaggtagcaaaggttcttca
gccactgatgttgttggaactaagggagatgaaggacctaaaggagaaacaggagatgat
ggagtgcgtggcgatcagggagtaccaggagttcaaggaccaccaggaataaaaggaaac
caaggaccagcagggcctaatgggacaaagggagaaaaaggaaatcaggggattgctatt
caaggacaaaaaggaaagatgggtgaaaaaggcataaagggagagaaaggaaaaccaatg
aatatcggagaacttaaaggaaacttcactgtaatcacgataaaggggggacaaggagat
agaggtgaaccgggccaagctggaagcaagggacagaaaggagaaaaaggacaatctagc
cctgggccagagggtatccaaggacctaatggaccaaaaggagaacccggtcaaaaggga
aatcagggggagacaggccaaaaaggagatccaggagagaatggtccaatgggacccaaa
ggtgaacaaggagatgatggtccaccaggagatagaggattagtaggacttccaggttct
ccaggagaagcgggtcagaaaggagacaaaggaagccgaggacctgcgggagtaggacca
ccaggtcctgatggacccaagggtgacataggccctcctggttttccaggtaggagtggg
ccaagaggcaacattggaaatataggtcccacaggccccccaggaccacctggaccacaa
gggccacggggtgacgctggacctccaggacctccaggaaaagtgggagatcctggtgct
gctggaattaagggttcaactggtgagccaggacctaatggccttccaggcccaaaaggg
gaaaaaggaggccgtggagtcactgtctttggaccacaaggcatggatggagcacctgga
ccaagaggagataggggagaaaagggatctcaaggatttccaggcccagcaggtgatagc
agtaatggtcctccaggaccaaaaggtgaccaaggaccccaagggtctccgggggaagat
ggcccaaaggggtctcaaggtcccaaaggtgaagcttgtcttggctgtccagccagcccc
caaggtcctccaggggaaaaaggtactatgggctccccaggccaacctggtgactcagga
agaactggcaaccctggacctcaaggtgacccagggaatcctggaccaccaggacgcagt
ggacgtgatggagagccaggtcagcagggtgatcgtggtgatcctggggctattggaccc
aaaggcgaaaagggagaggttatcagagtggtagggggaaaaggggcaaaaggagaaccg
ggcactgatggtcctcctggtgatcagggtcctccaggagcaaatggggaatcagggcaa
ccaggagaacgaggtcccagaggagagcctggaattaagggtgagaaaggcttagacgga
aaggatggaaaacagggcgatactggtctcaagggagagaaagggcttaaaggagaacaa
ggacagactgtagtgggtcctaagggaatagatggtgttaaaggcgaaaaaggcactgct
ggagagaaaggaaatttaggtgccaagggtgaaaaaggtgattgtcttagcttgggacaa
attaagaacatgacaaaaggagagaaaggtgagaaaggtttcccaggccccgaagggcca
acaggagataacggtcagccgggtgcagcaggagttagtggtgagagtggaccgccagga
gaaccaggaatgaaaggagagaaaggagatggaagtccagggccacagggacctcctggt
cctcaaggtggaaccggaccaccaggtcctaaaggtgacactggaatccgaggtgacaaa
ggttcccctggccctgaaggtccttcaggtagcgatggtgataaaggcgataagggagat
atcgggtcacctggtaaccctggggtacctggtaatccaggtaaaaatggagcccaaggg
gaccccggagaaaaaggcgaacgtggcagagatggtcagagaggtaaatctggggaaaag
ggtagcatcggcccagctggcaatccaggagatatagggcaaacaggacctcgaggattt
ccaggcgatccaggagcaaagggtgacgctgtggtcgggccacgtggtcctactggaaag
gaagggcccaaaggtcagcctggactaaagggtgagccggggcaaccaggacgagacgga
gacccaggtgacgacggccccagtggagaccgtggagagaaaggaacagaaggggctgca
ggtccacaaggtccagagggacccccagggctgaaaggagaggttggtgagcccggaaat
attggagagaagggattaccaggaatcccagggggccgcggtgataagggagacaagggc
agtgtcggaaaatcaggagaaccagggcccgagggtgttgaaggtgtcaagggtgaagac
ggcccgccgggcagacagggcttcccaggaaggaagggagaacagggtatgaaaggggaa
gaagggccacctggaaagtcaaacgcaacagtaatacctggagacaaaggcgacaagggc
gaccgcggccctgctgggccaccaggaagaaatggtgataatggtatcgatggagcagca
ggagaaaggggtagcccgggtgatccggggcctgaaggtccagctggtgaacgtggaaca
cctggtacacccggtactcgaggactaccaggtgacagaggactgccggggcccccagga
gctgaagggaaagaaggccctaagggccagacaggagctgcaggcccacctggagagcaa
ggaccacgagggtccgccggagacaaaggcgcgcaaggaagtaagggtgatgttggcctg
cctggaatcggtgttaaaggtgagatgggagaccgtggtccagagggcgcttcaggaaat
cgtggagaagatggaaagaaagggcaaccaggagaggatggacaaccaggacctccagga
cctcctggtcccccaggagatcaaggtgatcgagggcccaagggtgaccagggaactaca
ggagaaacgacagtcgttcagggccccaaaggagagaaaggtcaaccaggtcgaaatggt
gtggatggaactgatggaaccaacggtgaacaaggacctcctgggcagcctggtgaccaa
ggacccccggggcaggaaggtgcgcgaggtgaccctggtccgataggtccggttggcccc
cctggtccagatggtttggatggaggcgtaggcgctaaaggagataagggagaagaagga
acagccgggcagcctggggttaagggtgatgcaggtattaatgggtctgcaggccaacca
ggtgaaaaaggagcccaggggccaccaggagaggcaggagcagatggtcggcccgggctg
aaaggagaacgaggaccatcagatttcggattttatgtggtgcggcatagtcagaccgca
cagcttcctgattgcccaatcgatacagtagcgctgtgggaaggctacagtttgctctac
gttcagggcaatgaacgtgcccacggtcaagatcttggtcagccgggttcgtgtcttcct
aaattcagcaccatgccgttcctgttttgtaacctgaacgaaaactgtaacctagcctcg
agaaatgactacaccttctggctgtcgacacccgaacctattcccatgatgccagtggta
gacagtgatatccggccgttcattagtcgctgccgtgtctgtgaggcgccagctatggtc
atggcccttcacagccagagcatggtcgagccagattgtcctgagggctgggataggctt
tggataggctatagcttcttaatgcacacgagcgccggaaacgatggagcaggccagctt
ctatcatccccaggctcttgtctggaggacttccgtaccagtcctttcatcgaatgccac
ggccgcgggacatgtcattactatggtagcacgtacagtttctggttaacaaccgtcacg
gacgaggagcagttccgaacaccgaaatcaaaaacgattaaatccggaaaccaacgcgaa
cacgtcagtcgctgcactgtctgcatgaaaaaagtttacagtaataataatggcaacgga
aacggaggaggagtcgtggatcccatcgtggaccctggtgacctgccaaattaa
DBGET
integrated database retrieval system
