Stylophora pistillata (Smooth Cauliflower Coral): 111320781
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Entry
111320781 CDS
T05774
Name
(RefSeq) collagen alpha-1(VII) chain-like
KO
K06237
collagen type IV alpha
Organism
spis
Stylophora pistillata (Smooth Cauliflower Coral)
Pathway
spis04382
Cornified envelope formation
spis04512
ECM-receptor interaction
spis04518
Integrin signaling
spis04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
spis00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
111320781
04518 Integrin signaling
111320781
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
111320781
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
111320781
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
spis04147
]
111320781
00536 Glycosaminoglycan binding proteins [BR:
spis00536
]
111320781
Exosome [BR:
spis04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
111320781
Glycosaminoglycan binding proteins [BR:
spis00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
111320781
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
VWA
VWA_2
Motif
Other DBs
NCBI-GeneID:
111320781
NCBI-ProteinID:
XP_022779213
LinkDB
All DBs
Position
Unknown
AA seq
1682 aa
AA seq
DB search
MGPKGPPGEVGPPGIPGNQGPIGDRGVKGEPGPQGDVGSKADGDVSLLDGEKGDMGPPGE
EGDLGEFEVTIPPGKTIEPGSKGLKGEPGPLGANGAKGDTGDKPTESGEKGKQGPVGDQG
TVGRQGVPGDNGNMGAPGDNGTIGIPGELGAQGEPGERGPRGEQGSKGNPGSAGPIGSTG
ERGGGLPGRIGNKGMKGTAGRTGDRGGPGKRGDVGPPGSPGASVFGPKGDVGEPGPTGLP
GAPGTAGFPGMRGNAGPPGEEGPVGRNGSLGPPGEDVPGPKGMDGSRGPKGYSGEQGELG
PKGPPAEPLFCPEGDCPDPRVGLKGPPGSPGSQGVRGAQGLPGEKGANDTCPICPPGPRG
PKGEKGWIGDDGTPGENGTDGNKGAQGTTGDRGPQGPDGSPGPKGPKGFPGEPGKTGEKG
EAPVGPREEVYQPPGPKGDEGSPGFEGSTGPAGNNGSSGPPGSSGETGLPGEPGMTGLNG
SSGKDGQRGAPGIRGTTGQKGEKGIMPMPDIAKNGSKGDPGDKGSEGDKGAKGEGTSLGE
LAQLFFGGDRGDNGSAGIRGGPGMDGVQGQKGANGSKGVEGPKGMRGEDAQGPAGPPGAP
GQDGSAGGRGEEGAKGDIGMDGPDGAPGKNGSRGMTGEPGGSRDGPKGKDGEDGKKGAKG
VQLTLCGQENADYAFLMDASRSILEDEFQLLKDYVKDVIDYLSIGPDLTHVGVIEYSTGA
KMELPFNQAYDKEEIKRIVDNVTHTKGITRIDLALKVASKELFDETIGGMRKSSRKVMVL
LTDGNQTGTDIVPDQVPLVDAIQPLKNLGVKVIAVAIGSVDINQLRILVTDNDDILRTES
FAKLRELVRTTVERSCRGPIGDPGLKGPQGFPGESGGVGLEGLPGMPGKQGPKGDQGRTG
TPGPVGDSGDKGSTGDEGPPGFATPGSKGPKGDPGDPGPPGDPGLSGVNGEQGQKGLQGE
PGFQGNKGAIGPDGPPGPPGEAGAAGEPGTSGSQGITGFNGIDGEMGPPGDPGVSGDPGP
PGAKGEPGLFGEPGLDLQGEKGQPGPKGADGLPGLNGFPGERGDNGSPGRSGNATPGEQG
GTGLPGIKGQKGDAGPQPGEGVVLPSGNQGDVGADGKMGMPGLNGGPGQQGRQGERGGNG
PPGVAGVIGDQGAPGPLGEIGARGMPGIPGESGAQGDPGADGAKGVQGDRGEAGSNGQNG
ERGARGPRGQGGIDGISGEPGDVGPPGDPGSRGLNGSKGLPGITGLDGPPGPPGAPGDQG
PTGEQGARGEMGEMGPPGPKGLKGLVGPRGLSGIVGEKGEQGSNGTIGGPGIRGDPGNRG
PEGERGANTITPGPKGEKGVAGLPGLFGRKGTPGNQGPRGPPGDVQGPKGNPGLPGLPSE
NKGPRGEEGVPGKRGGPGFPGDQGLPGQDGPTGNIGKAATGEGYHLVVHSQSPRIPDCPL
NLTRLWTGYSLLYVQGHDTSHGQDLGASGSCMRRFTTMPYLFCNINDQCYYASRNDYSYW
LTTDIQIPMMPISAPAVEPFVSKCAVCEAPGPVVATHSQSTQNPDCPAGWEAIWNGYSFL
MHTGAGGSGSGQSLSSPGSCLRTFRHNPFFECHGRGTCHYFANKYSFWLSTVGQMFVAQT
PETLKPGNLLSRVSRCTVCYRVASKKKKRHRALYPKVLPEQRKLSSASLKLQSAAQQLSR
RS
NT seq
5049 nt
NT seq
+upstream
nt +downstream
nt
atgggaccaaaaggtcctcctggagaagttggccctcctggtatacctggaaatcaaggt
cccattggtgacagaggtgtaaaaggtgaaccaggacctcaaggagacgttggttcaaaa
gctgatggagatgtgtctttacttgatggagaaaaaggagacatgggtccgcctggagag
gaaggagatctaggagaatttgaagttactattccacctggaaaaactatagagccgggg
agcaagggactcaaaggggaaccaggacctcttggtgctaatggagccaagggggataca
ggtgacaaaccaacagagagtggtgagaaaggaaagcaaggaccagtcggagaccagggt
acagttggaagacagggagttcctggagataatggaaatatgggagccccaggagataat
ggtaccattggtatcccgggtgagcttggggcccaaggtgaaccgggtgaaagaggccct
cgtggtgaacagggttccaagggtaaccctggatctgcaggtcctattggttcaacagga
gaaagagggggtggactgccaggtcgaataggtaataagggaatgaaaggaacggcaggt
cggactggtgacagaggaggtcctggtaaacgaggagatgtgggaccccctggttctcca
ggtgcttctgtatttggacctaaaggtgatgttggtgaaccagggccaactggtctccct
ggggcccctggcactgcaggttttccaggtatgcggggaaatgctggaccaccaggtgaa
gagggaccggtaggtaggaacggttcacttggaccaccaggagaggatgtacctggaccc
aaaggtatggatgggtcacgaggaccaaaaggatattccggagaacagggcgagttagga
cccaaaggaccaccagctgaaccactgttttgtccggagggagactgtccagatcccaga
gttggtctcaaagggcccccaggctcaccaggaagtcaaggagtaaggggcgcccaagga
ttaccaggagagaaaggtgcaaacgatacgtgtcctatttgtcctccagggcccagaggt
cctaagggggaaaaaggatggatcggggacgatggaactcctggggagaatggtacagat
ggaaacaagggtgcacaagggacgactggggatcgtggtccacaaggtcctgatggttca
cctggaccgaagggtcctaagggttttccaggagagccaggaaaaacaggagaaaagggt
gaagcgcctgttggtcctagagaggaggtttaccagcccccaggtccgaaaggtgacgaa
gggagccctgggtttgagggctcaactgggcctgctggtaataatgggtcttctggaccg
cctggttcaagtggagaaactggattgcccggtgaacccggaatgacgggtcttaatggt
tcttcaggtaaagatggtcaacgcggagcgcctggtatcagaggtacaactggtcagaaa
ggtgagaaagggatcatgccaatgccggacatagctaaaaatggctcaaaaggtgatcct
ggagacaagggctccgaaggagacaaaggagccaaaggagaaggcacaagtttgggtgaa
ctagcgcagcttttcttcggcggcgataggggtgataacggttcagcaggaataagagga
ggaccaggaatggatggagttcagggacagaaaggtgcaaacggtagtaagggtgtagaa
gggccaaaaggaatgcgaggagaggatgctcaaggacccgctggaccccctggtgctcca
ggtcaagacggatctgcaggtggtagaggtgaagaaggagctaaaggagacataggaatg
gacggccctgacggagctccggggaaaaatggatcaaggggtatgacaggcgaaccaggt
ggcagtcgagatggaccaaaaggcaaagacggcgaagacggaaagaaaggcgcaaaaggt
gtgcaattaactttgtgtggccaggaaaatgctgactatgccttcctcatggatgcatcc
cgtagtattctcgaggacgaatttcagttgctgaaagattatgttaaggacgttattgac
tacctcagcattggccccgatctcactcatgtcggtgtcattgaatacagcacgggcgcg
aaaatggagctgccttttaaccaagcgtatgataaagaagaaataaaacgcatcgtagat
aacgtaacacacaccaagggtattacacggatcgatctggctctgaaggttgcctcaaag
gaattatttgatgagacaattggaggaatgaggaagtcatctagaaaggtaatggttctg
ctcacagatggcaaccaaacaggaactgacatagtaccagaccaagtacctcttgttgat
gccatacaacccctcaagaatcttggtgtcaaggtgattgctgttgcaatcggaagtgtt
gatatcaatcaactgcgtatattggtcaccgacaatgatgacattttgaggacggaaagc
tttgctaaacttcgagaacttgtcaggaccactgtcgaaaggagctgcagaggtccaata
ggggaccctggtttgaaaggaccacagggttttcccggcgaatcaggaggagtgggcttg
gaaggtctccctgggatgccaggaaagcagggacctaagggagatcagggtcgcacaggg
acaccaggtcctgtcggcgacagtggagataaaggatcaactggagatgaaggaccccca
ggattcgcaaccccaggatcgaaaggaccaaaaggggaccctggagatccaggaccaccg
ggagatcccggtcttagtggagtaaatggtgaacaaggacagaaaggcctccaaggagaa
cctggatttcagggaaataagggtgctatcggacctgacggaccgcctggacctccagga
gaagctggagctgccggtgaaccaggtacatctggaagccaagggattacaggatttaat
ggaatagacggagagatgggtcctcctggagaccctggagtaagtggtgatcctggcccc
cctggagctaagggcgaaccaggtctgtttggtgaacctgggctagacctacaaggagaa
aaaggtcaacctggacctaaaggagctgatggattgccaggtttaaacggattccctggt
gaaagaggcgacaatggatcgccaggccgctccggaaatgccacacctggtgaacaagga
ggaactggtcttcctggaatcaaaggacaaaagggcgacgctggtccacagccaggagaa
ggcgtggtccttccgtctggtaaccagggggatgtcggagctgatggaaaaatggggatg
cccggattaaatggtggcccaggacaacagggaagacagggagagaggggaggtaacgga
cctcctggcgtagcaggggttatcggcgatcagggtgccccgggccccttgggagaaatc
ggagcacgaggcatgccagggatccctggggaatcgggagcgcaaggcgatcctggagca
gacggtgctaaaggggttcaaggagaccgaggggaagctggatctaacggtcagaatggg
gaaaggggtgccagagggcccagaggtcaaggagggatcgatggcataagcggagaacct
ggtgacgttggacccccaggtgaccctggttcaaggggccttaatggaagcaaaggcctt
cctggcattactggccttgatggacccccaggccctccaggagcacctggtgatcaaggc
ccaaccggtgaacaaggtgctcgcggagagatgggagaaatgggacccccagggcctaaa
ggactcaagggtttggtaggacctcgtggccttagcggaattgttggagaaaaaggtgaa
cagggaagcaatggtaccattggtggcccgggcataagaggcgatccaggcaatcgtggg
ccggaaggtgaacgtggagcaaacactattaccccaggaccaaagggtgagaaaggagtg
gctggactgccggggctctttggtaggaaaggaacgccgggaaaccaaggacctcgaggc
cctcctggagatgttcaaggcccgaaaggcaacccgggtctgcccggtctaccatctgag
aataaaggaccacgaggagaagaaggagttccgggaaaaaggggcggtccaggcttccct
ggggatcaggggttgcccggtcaagatggcccaacgggtaacataggaaaagcagcaaca
ggtgaaggttaccatttggtggtccacagtcaatctcctagaatacccgactgtccactg
aatttgactcgactgtggacgggctacagtttgttgtacgttcaaggtcacgatacttct
catggccaagatctcggtgcttctggctcgtgtatgagacgtttcactaccatgccatac
ctcttttgtaacataaacgatcaatgctactacgcctctagaaacgattacagttattgg
ctgaccacagatatacagattcccatgatgcccatcagtgctcccgctgttgagccgttt
gtcagtaagtgtgcagtgtgcgaggctcctggccctgttgttgccactcatagtcaatcc
acacaaaatccagactgccctgccggttgggaagccatttggaatggatacagcttcttg
atgcatactggtgctggtggaagtggcagtggccaatcgctttcctcccccggatcttgt
ctcagaactttccgtcacaatcctttctttgaatgccatggtcgtggtacctgtcactat
ttcgctaacaaatacagcttctggctgtccaccgttggacagatgttcgttgcgcagaca
ccggagaccctaaaaccaggaaatctcctgagtcgtgtcagccgttgtacggtgtgttac
cgggtagctagcaaaaagaagaagcgtcatcgtgccttgtaccccaaagtattaccggaa
cagaggaaactttcttcggcgtcgctgaagctccaatcagcggcgcaacagctgtcgcgg
cggtcgtag
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integrated database retrieval system
