KEGG   Stylophora pistillata (Smooth Cauliflower Coral): 111320820
Entry
111320820         CDS       T05774                                 
Name
(RefSeq) collagen alpha-1(I) chain-like
  KO
K06236  collagen type I alpha
Organism
spis  Stylophora pistillata (Smooth Cauliflower Coral)
Pathway
spis04512  ECM-receptor interaction
spis04518  Integrin signaling
spis04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:spis00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    111320820
   04518 Integrin signaling
    111320820
 09140 Cellular Processes
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    111320820
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   00536 Glycosaminoglycan binding proteins [BR:spis00536]
    111320820
Glycosaminoglycan binding proteins [BR:spis00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   111320820
SSDB
Motif
Pfam: Collagen COLFI
Other DBs
NCBI-GeneID: 111320820
NCBI-ProteinID: XP_022779254
LinkDB
Position
Unknown
AA seq 1371 aa
MSSRLAYRGIPGPSGPRGETGSSGPPGPPGRRGPPGPSGRPGPPGPPASPGSIAATLNGL
KGPYMVPTIISARSIIPSPLGLQGRSGPTGLIGAIGVPGIIGPDGESGIPGAVGPLGARG
DPGFPGNDGNPGPKGQTGPPGYRGSTGPLGDVGGTGAQGSRGPKGRSGRTGRNGDRGEDG
DVGQTGTVGQPGTDGNMGQQGKRGISGTSGNRGQQGMPGEQGTLGNVGAQGVAGQMGSPG
APGSVGLKGSSGNPGTPGDVGYTGETGDTGPQGPQGNNGELGEQGPKGGKGAKGAMGDFG
PQGEQGEQGPSGEQGAPGDTGPTGPQGGLGSEGLTGKAGSQGDKGKQGKTGVQGGTGSPG
PAGGNGSPGGQGSPGIPGNTGLMGEAGAEGERGPIGETGLQGIVGNRGSRGSRGQAGMQG
VSGLPGPQGPQGERGGRGRGGPQGKAGNPGTPGMLGENGTPGTSGQMGPPGVAGPTGMLG
QKGEQGEEGPQGTRGEAGPTGGQGELGPTGAQGSRGAMGEQGTEGPAGESGSTGEDGDQG
PTGSPGDVGEVGVSGSEGAKGSAGTSGLPGTTGAPGSFGSPGLSGEQGPRGRVGERGDEG
KSGPAGPPGPIGEVGDVGSQGQTGAPGPAGPVGPPGAKGGEGEAGPVGRRGENGANGQNG
ASGEVGEQGMSGDMGVKGIPGDDGISGQIGAAGRSGQRGDPGISGTAGYPGTPGPPGPEG
DAGAAGTTGEKGSPGETGPAGGPGSSGDEGVMGDMGPKGYRGDSGEEGEGGQRGPTGLLG
PPGAAGSVGSVGVTGANGQPGRKGEVGGFGGPGAAGTSGAMGRPGQDGPPGELGSTGPSG
RAGPAGPPGPQGAVGMRGSVGPTGSRGAVGNEGAKGELGEPGSDGKDGARGSLGMVGPDG
LQGTQGRPGNEGETGATGELGAPGLQGPKGDQGQMGVQGDQGAQGEPGLDGSKGEQGRDG
TSGDDGRAGAEGPRGTTGPRGDTGDQGEPGEEGTEGQRGEKGERGEQGDPGPEGNLGPKG
AQGDIGPPGSSGNEGPQGTDGDQGIPGISGEQGKVGLMGQSGPLGVKGDRGVQGTEGQRG
DPGEPGPPGPAISLSELVTSSGYTGFGQLTEAPQEPPLTAEKAGTVNLYRSQKSVDGQEH
DPLSNFVTLVKKKLTLMKKPNGSSLFPARTCKDLYMSYPDLPSGFYWIDPNDGLPNDAIR
VRCEQHTYSTCLYPKSNDEFLQTFATEKKKWFTGADGYKWLGKDLRMFKNIEYVSEPSQL
EFLRLLSDRARQRVIYNCKDSVAWGDEKNEFSKSVKIKADNGVEMHAESSNKFKPKVILD
DCAVKDGKWHHTILEVDTPKPYRLPILDIAAYDIGDRGEEFGIEIERLCFT
NT seq 4116 nt   +upstreamnt  +downstreamnt
atgagttcaaggttagcttacaggggtattcctggacctagtggaccccgtggcgagaca
ggatcaagtggacccccgggacctcctggtagaagaggaccacctgggccctcaggacgt
cctggaccgccagggccaccagcttctccaggttccatagcagctactcttaatggcctc
aaaggaccatacatggtgcccaccataatctctgcaagatccattattccctctcctctt
ggattgcaaggacgctcaggaccaacaggattaattggtgctattggcgttcctggaata
attggaccagatggagaatcaggaattccgggagctgtcggcccgcttggagccagaggg
gatcctggattccctgggaatgacggaaaccctggacctaaaggacaaactgggccccca
ggatatcgaggaagtacggggcctctaggtgatgtcggtggaacaggtgcccaaggatca
agaggtccaaaaggtcgaagtgggcggactggacgcaacggggatagaggagaagatggt
gatgtggggcaaacgggaacagtgggtcaaccggggacggatggcaatatgggtcagcaa
ggcaagaggggaatttctggaacaagtggcaatcgaggacaacaaggtatgcctggtgag
caaggtacgctgggaaatgtgggtgcgcagggtgttgctggtcagatgggttccccagga
gcaccaggtagtgtgggacttaaaggctctagtggcaatccgggcactcccggtgacgtt
ggctacactggtgagaccggggatacgggtcctcagggaccccaaggaaataatggagaa
ctgggagaacaaggaccaaagggtggaaaaggagccaagggtgcaatgggtgactttgga
ccacaaggtgaacagggagagcaagggccttctggagagcagggtgccccaggggatacc
gggccaacaggaccacaaggaggccttggttcagagggactcaccggtaaagcaggatcc
cagggagataaaggaaaacagggtaaaacaggtgttcaaggaggcacagggtcaccaggt
ccagccggaggaaatggtagcccgggtgggcaaggctctcctggtattccaggtaacaca
ggattaatgggagaagcaggtgctgagggtgaaagagggccgatcggtgagacaggactg
cagggaattgttggaaatcgaggctcaagagggtctcggggtcaagcgggtatgcagggg
gtatcaggattaccaggccctcaaggaccacagggagagcggggagggagaggtcgagga
ggaccccagggaaaggcgggaaatcctgggactcctggaatgctaggcgaaaatggcaca
ccaggaacatcaggccagatgggccctccaggagttgctggaccaactggaatgctggga
caaaaaggagagcagggtgaagaaggtccccaaggaactcgtggtgaggcaggaccaact
gggggacagggtgagctaggaccaactggggcccagggctcacgaggagcgatgggagag
cagggaactgaaggccctgctggagaatctggatcaactggagaagatggcgatcagggc
cccacgggaagtccaggagatgttggagaagttggcgtttctggatctgagggcgcaaag
ggaagtgccggaacaagtggcctgcctggaacaacgggagcacctggctcgtttgggtca
ccaggattatctggagaacagggacctaggggacgagtaggagagcgaggtgatgagggc
aaaagcggaccagcgggaccaccagggcctatcggcgaagtcggtgatgttggaagtcaa
ggacagactggagcccctggaccagcaggacctgtgggaccccccggagccaaaggagga
gagggtgaagcaggaccagtcggtcgtcgcggcgagaatggtgccaatggtcaaaatggt
gccagtggtgaagtaggagaacaaggaatgtcaggcgatatgggcgtcaagggaattcct
ggtgacgatggaataagtggacaaatcggcgctgctggacgctcaggccaacgtggcgac
ccaggaatcagcggaacagcaggttacccgggtactcctggaccgccaggtccggaagga
gacgcaggggctgccgggacgactggggaaaagggctcccctggggagactgggccggct
ggtggaccagggtctagtggagatgagggtgtcatgggtgacatgggacccaaaggatat
cgtggcgacagcggagaagagggtgaaggaggccaacgagggcccacgggattacttgga
cctccaggagcagcggggtctgtggggagtgtaggagtgacaggtgctaatggccaacct
ggtagaaagggtgaggtgggcggcttcggagggccaggagctgcaggaacttcaggagct
atgggtcgccctggacaagacgggccacccggagaactgggctctactggaccaagtgga
agagcaggacccgccggaccacccggaccacaaggggctgtcggaatgcggggaagtgtt
ggtccaactggatcaagaggagctgtaggcaacgagggagcgaagggtgagttaggagaa
cccggaagtgacggcaaagatggagcccgaggatcactgggaatggtaggaccagatgga
ttgcaaggtacccaaggtcgaccaggaaacgaaggtgaaacaggagcgacaggagaactg
ggtgcaccaggacttcaaggacccaagggagaccagggtcaaatgggcgtacaaggtgat
caaggagctcaaggagagccaggtcttgatgggtctaaaggtgaacagggcagagacgga
accagtggtgatgacggacgtgctggtgcagaagggccaagaggaaccacgggaccccgt
ggagatactggagatcagggtgaacctggagaagaaggaactgaaggccagagaggagaa
aaaggagaaagaggtgaacaaggggatccgggcccagaaggaaacctaggacctaagggc
gctcaaggcgacatcggccctccggggagcagtggaaatgaaggaccacagggaactgac
ggggaccaaggaatccccggaatatcgggtgaacagggaaaagtgggattgatgggccaa
tctggtccattaggagtcaaaggtgatcgtggagtacagggaacggagggtcaacggggt
gatcccggagagcccggaccgcctggcccagcgatttcccttagcgaacttgtgacatct
tcagggtacactgggtttggacaattgacagaggcaccgcaagaaccaccgcttacggcc
gaaaaagcgggaacagttaatctctatagaagtcaaaagtcggtggacggtcaggagcat
gatccgctatcaaactttgtcactctagtgaagaagaaacttacgttgatgaaaaagcca
aacggctcaagtttatttcccgcgaggacctgtaaagacttgtacatgtcttatcctgac
ctcccaagcggattttattggatcgaccctaatgatggtctacctaacgatgccattaga
gttcgatgcgaacagcatacttactcaacttgtctttaccccaagagtaatgatgagttt
cttcagaccttcgctactgaaaaaaagaaatggttcaccggggctgatggttataaatgg
ttaggaaaggatctgcgcatgtttaaaaatattgaatatgttagcgagccaagccaacta
gaatttctccgcttgctgagtgaccgagccaggcagagggtcatatacaattgtaaagac
tcggtggcctggggcgatgagaaaaacgaattttccaagtctgtcaagattaaggctgac
aacggagttgaaatgcacgcagagtcttcaaacaagtttaagcccaaggtcatccttgat
gactgtgcggtcaaagatggaaaatggcaccacacaattctagaagttgacacgcccaaa
ccataccgccttcccattctggacatcgcagcttatgacatcggagacagaggtgaagag
tttggaatagagattgaaagactgtgcttcacttaa

DBGET integrated database retrieval system