Stylophora pistillata (Smooth Cauliflower Coral): 111320821
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Entry
111320821 CDS
T05774
Name
(RefSeq) collagen alpha-1(I) chain-like
Organism
spis
Stylophora pistillata (Smooth Cauliflower Coral)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
COLFI
Motif
Other DBs
NCBI-GeneID:
111320821
NCBI-ProteinID:
XP_022779255
LinkDB
All DBs
Position
Unknown
AA seq
1324 aa
AA seq
DB search
MSGAAGADGLKGERGVQGPRGPPGPPGDIISVTPTGDPGDGPVDPIGHIILDRNSKGPGA
GRIQEVKGDKGAPGAQGEPGATGDIGPPGIGGSPGTDGPPGKPGQDGNDGQPGPPGQIGE
TGVQGSAGPNGVPGVRGLRGVKGDMGSQGERGERGDKGEEGETGPSGEAGRDGQDGLKGD
PGVRGNTGAPGTNGAAGPTGPAGTRGPEGAAGPPGQRGDNGSPGAIGAKGNVGLTGRPGP
RGARGSAGPPGLKGPGGEPGNPGKNGPQGEPGFKGEQGAVGPMGPIGRIGSAGADGLPGL
AGNRGRPGEQGAPGKPGRRGLEGAKGQTGSTGTTGAPGKPGPQGKRGSSGRTGLPGGLGA
PGPVGPSGNRGYSGAEGRQGVKGDSGRNGENGRDGGKGEQGLQGEPGNPGRPGPRGDNGA
AGKSGKSGSQGIPGVDGEDGTPGIPGVPGPQGAPGTPGFSGPKGTMGNNGRDGSTGERGA
DGVKGEQGATGEIGKPGTPGLAGRQGFRGDPGAQGSAGASGPPGIQGLPGASGKLGSPGF
PGTRGKDGSPGLQGERGPRGEQGPIGPQGAPGIEGENGLPGSDGLPGDRGAPGAPGGPGP
EGGPGLPGLPGRAGFSGAKGNFGEKGNQGSTGEAGRDGDPGGDGAPGAVGQPGLPGPKGT
DGSPGVPGRRGDRGATGGRGSLGSPGSPGIPGSPGPTGSQGLPGAKGNAGEKGTKGEEGA
VGAKGIAGDLGVAGRIGPKGNPGSTGINGNRGASGSPGRPGSQGPPGPPGNSGLPGQPGI
PGTKGSRGVGGKPGTPGLPGRPGIPGRDGLPGLSGSDGRPGSIGPIGPRGIGGDRGPEGL
IGIPGRRGGFGPPGAKGAKGDLGFNGATGESGRSGYPGPRGLSGDKGANGSPGTPGANGE
NGENGVEGSEGDNGPRGSPGVDGTVGVPGPMGPGGEKGVRGPQGDIGDPGRDGDFGETGR
RGNDGPPGYRGNPGEVGLMGSRGDVGYTGEVGKTGPPGVDGEGGLAGRNGTDGPAGPKGG
SGAAGPPGLQGSAGPEGTVGPRGDPGKQGDRGEPGKDGELGDPGIRGLKGPMGPPGQSLA
EALAELSSGEKGPPPYRLYSSQGSEQSRDSNNDAGAQLFKSMDIEFMISLLDRKIQNFRE
QTGDLEHPARSCREIKLDHPESKSGEYTIDPNEGCSSDAVKVYCDFEKNATCVNPTKTKI
VVDANETGPGQWTNEDEPIEYKLNSVQMKYLRLLSKSAFQEMSYSCANSHKSCMVDLKGD
NEMVVNNLEKIKLDVTETSVNGNKNLKIEVSTAQQNNLPIVDWAPQSSVDSKLTFEIGPV
CFKY
NT seq
3975 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggtgcagcaggtgctgatggattaaaaggagaacggggtgtgcaaggaccaagg
gggccaccaggtccccctggggatataatttctgttacccctacaggagatccaggagat
ggaccagttgatcctattggacatatcatcctggatagaaattcaaagggtcctggagct
ggtaggatccaggaagtcaaaggagacaagggtgctcctggtgctcaaggagaaccagga
gcaacaggtgacattggtcctcctggaatagggggaagcccaggaactgatggaccccct
ggtaaaccaggacaagatggcaatgatggccaaccaggaccaccaggacaaattggagaa
actggagttcaaggaagtgcaggaccaaatggtgtgcctggtgtacgaggtctccgtggt
gtgaagggtgacatgggatcacaaggagagcggggtgaaagaggagataaaggagaggaa
ggagaaacaggtccttcaggtgaggctggaagggatggacaagatggattaaagggagac
ccaggagttcgaggtaacacaggagctcctggaacaaatggcgcagctggtcctacagga
ccagctggaacaagaggaccagagggtgctgcaggtcctcctggccagaggggtgacaat
ggatcaccaggtgccataggggctaagggaaatgttggcttaacaggcagaccaggtccc
aggggagccagaggatctgcaggacctccaggtttgaaaggaccaggtggtgagccagga
aatccaggcaagaatggtccccaaggagagccaggtttcaaaggagaacagggtgcagtg
ggaccaatggggcctattggccgtataggaagtgccggagcagatggccttcctggtctt
gctggtaaccgtggacgccctggagaacagggagcccctggaaaacctggaagaagagga
ctggaaggtgctaaaggacaaacgggtagcacaggcactacaggtgcacctggaaagcct
gggcctcaaggaaaacggggatcatccggaagaacaggactcccaggaggacttggtgcc
cctggtccagtaggtccttctggcaatcgaggttattctggtgcagagggaaggcaagga
gtaaagggtgacagtggtagaaatggagagaatggacgggatggaggaaaaggagaacaa
ggattacaaggggaacctggaaatccaggccgaccaggacctcggggagacaatggtgct
gcgggaaaatcaggaaagtcaggctctcaaggaattccgggtgttgatggagaggatggt
acccctggaatacctggagtccctggcccacaaggtgcaccaggaacaccaggtttctct
ggtcctaagggaacaatgggtaacaatggaagagatggaagcactggagaacgaggagca
gatggtgttaagggtgaacaaggtgctacaggagagattggtaaacctggaacaccagga
ttggcgggtcgacaaggtttcaggggagaccctggtgctcaaggaagcgcgggagcatcg
ggaccgcctggtattcaaggactccccggtgcatctggtaaactaggaagtccaggattc
cctggaacgcgaggcaaagatggttcaccaggattacagggtgaacgtggaccaagggga
gaacaaggtcctattggacctcagggagctcccggcattgaaggcgagaatggcttacct
ggatctgatggtttgccgggagacagaggagccccaggagcccccggtggaccaggtcct
gaagggggaccgggtttgccaggtctgcctggtcgagcaggattctctggagctaagggt
aactttggtgagaaaggcaatcaaggttctactggagaagctggtagagatggtgacccg
ggtggcgatggtgccccgggagctgttggtcaaccaggtctgccaggacctaagggcaca
gacggatcaccaggagtcccaggaagacgaggagatcgtggggcgacgggaggccgtgga
tcacttggttcccctggaagtccaggaattcctggatccccgggaccaactggctcccaa
ggacttcctggagcaaaaggaaatgcaggcgaaaagggtacgaaaggagaggaaggcgca
gtgggagcgaagggaatagctggagacttgggagttgccggacgaattggtcccaaagga
aatcctggatctacaggaattaatggtaacagaggtgcctcagggtcaccagggcgacca
ggatcacagggcccgcctggaccacctggcaacagtggtttgccaggacaaccaggaatc
ccaggaactaagggctcgcgtggcgttggtggtaaaccaggaactccaggcttaccagga
agaccggggataccaggacgtgacggcctacccggattatctggatcagatggaagacct
ggttcaataggtccaatcggaccgcgcgggattgggggagacagaggacctgagggccta
attggcattccaggaaggcgaggaggattcggtccccctggagcaaagggtgcaaaagga
gacctaggctttaatggagctactggcgagagtggacgatccggttatcctggacctcgc
ggcctttctggagacaaaggcgcaaatggatcaccgggtacaccaggagcgaacggtgaa
aatggggaaaatggtgtagagggtagcgagggagataacggtccccggggatcgcctggc
gtagacggaactgtgggagttcccggaccgatgggacccggtggggagaaaggagtacga
ggtccccaaggagatatcggtgatccaggtagagatggcgatttcggagaaactggcaga
agaggaaatgatggaccacctggttaccgaggtaatccgggagaagtcggtttaatggga
tcacgaggtgacgttggatataccggtgaagttggcaagacaggtcctcctggagttgat
ggcgaaggtggccttgctgggagaaacggaactgatggacctgcaggaccaaagggtggc
tcgggagccgcaggccctcccggtctacaaggatctgccggaccagagggaactgttgga
cctcggggagatcccggcaaacagggtgatcgtggagaacccggaaaagacggtgaactg
ggagacccaggtatacggggacttaaagggccaatgggaccgccaggacagagtttagca
gaagcgcttgctgaactgagctctggtgaaaagggacctccaccctacagattgtactcc
agtcaaggatctgaacaatcacgtgattcaaacaatgacgctggagcccaactcttcaag
tcaatggatatcgaatttatgatatcgcttctggacagaaaaattcaaaacttccgagaa
cagaccggggacctggaacatcctgctcgatcatgccgagaaattaaactggaccatcct
gaatctaagagcggtgaatacacgatcgatccaaatgaaggctgcagtagtgacgctgtc
aaagtctattgcgatttcgagaagaatgctacctgcgtaaaccccacaaagaccaagatt
gttgtcgacgccaacgaaactggtccaggacaatggacaaacgaggatgaaccgatcgaa
tacaaactaaactcggtgcaaatgaaatacttacgacttctgagcaagagcgctttccaa
gaaatgagctacagctgcgcaaattcacacaagagctgcatggtggatcttaaaggcgat
aatgaaatggtggtcaataacttggagaagataaagcttgatgttacagagacgtctgtt
aatggaaacaaaaacttgaagattgaagtctcgaccgctcagcagaataacctgccgata
gtggactgggcaccacaaagcagcgtcgactccaagcttacttttgaaataggaccagtt
tgttttaagtattag
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