KEGG   Stylophora pistillata (Smooth Cauliflower Coral): 111320822
Entry
111320822         CDS       T05774                                 
Name
(RefSeq) collagen alpha-1(I) chain-like
  KO
K19719  collagen type II alpha
Organism
spis  Stylophora pistillata (Smooth Cauliflower Coral)
Pathway
spis04512  ECM-receptor interaction
spis04518  Integrin signaling
Brite
KEGG Orthology (KO) [BR:spis00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    111320822
   04518 Integrin signaling
    111320822
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   00536 Glycosaminoglycan binding proteins [BR:spis00536]
    111320822
Glycosaminoglycan binding proteins [BR:spis00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   111320822
SSDB
Motif
Pfam: Collagen COLFI
Other DBs
NCBI-GeneID: 111320822
NCBI-ProteinID: XP_022779256
LinkDB
Position
Unknown
AA seq 1429 aa
MVSKSNLSLALRLFLVVFLLLNDVHAQTTAPGGEGEGEGEGEGAEEGGGQGGQEADQPPP
PPQKIGPPGDPGPKGDKGDQGDAGEQGPQGLRGDAGPNGLDGLKGVRGPQGPPGPPGPPG
PIVTVPPDGGPGPDEGGPDPISIVSEIRSQDSKGPIGIIQTVKGERGVDGPPGLRGSPGL
RGPEGEPGAPGAIGPPGATGKPGQAGPPGSSGEPGMNGADGIPGPAGQAGDSGQQGIQGP
PGVPGVRGLSGVKGDRGEQGGQGAPGDRGEPGGGGFRGENGRPGADGAPGAQGLRGQTGE
AGSIGNPGLPGAIGTPGPEGPAGVPGETGNSGSNGAPGAKGDQGAPGPAGPTGRQGPRGE
PGKEGPKGDAGQTGQPGAEGRPGYKGDMGAAGAMGPLGDIGPEGAPGNPGSPGQPGRRGD
LGAPGRPGKRGSEGAKGSVGTKGNAGGIGVRGPPGKRGKQGRSGKRGNIGEPGAQGSQGE
GGYRGAEGRAGERGAQGPPGADGLSGAKGDQGNPGDLGETGRPGIRGSQGPAGKPGRPGN
TGAPGQAGDDGRPGAVGTPGPPGAQGIPGFSGAKGSMGNPGRDGAPGARGSRGAKGSMGS
RGQQGKPGIPGREGRRGERGELGLQGPAGEQGPGGNVGPTGVPGNTGNPGVRGERGKDGR
AGEAGNRGQAGEPGPMGAPGDKGPEGKRGATGSSGSPGFPGLPGRPGGSGKKGEPGSPGA
AGPPGSDGNDGVGGSDGVPGSVGPPGLPGPKGQDGTPGTPGLRGKRGDQGLRGPVGSPGT
PGRSGMPGQTGPRGQIGLKGNVGEKGRKGDEGPLGSKGPQGGAGDSGLEGEKGGVGKPGD
PGIRGSSGPPGQPGAQGPPGPVGLSGSPGKPGLNGVKGARGPVGRSGLPGLPGQVGLPGR
DGTPGVSGADGRVGNLGPTGPMGPKGDTGREGAPGPPGRTGPEGAVGEAGSGGVPGYSGN
PGESGRTGYPGPHGRPGTDGAKGQPGANGFDGTPGTPGENGEGGNQGERGSPGPNGVAGA
SGPPGPTGEKGEGGPQGETGDSGVNGDPGKIGERGRDGVMGDPGEQGEPGIIGERGDGGY
TGKSGNMGRMGFEGEVGAPGRNGSEGPAGPQGPLGAQGTPGQDGFAGEEGVTGPRGDPGK
RGVRGSTGRDGIEGDPGAAGPPGPMGPPGSYLIGEIINGANKGPPPNFRLYSSSESTSPR
EETRLLEHPEMKKVLDGLTKHTDLYRRQKGSKYHPARSCRDLQLDLDSNDTVHSGFYWID
PNEGCISDAEYVYCDFENSRVCVHPKKENITIDDPKAKQWISEVHPDVELISYNMEPVQM
RFLRLLSMRITQNVTYHCYNSRAWEDDNDRTIKLQGENEMELTSSEKTKPKVVTNSCDNK
DSSWHQTVLEIDTTQKNALPVVDVAAYDVGDKLVEQKFTIQLGPVCFVY
NT seq 4290 nt   +upstreamnt  +downstreamnt
atggtctctaagagcaacctctcgttggctctgcgtttgttcttagtggtgtttcttctt
ctgaacgatgtgcacgcccaaacaaccgcacctggaggcgaaggagaaggagaaggagaa
ggagaaggagcagaggaaggcggcggacaaggaggacaagaagctgaccagcccccacca
ccacctcaaaagatagggccccctggcgaccctggaccgaaaggagataagggagatcaa
ggagatgctggagaacaaggaccacagggcttgagaggggatgcgggtcctaatggattg
gatggtcttaaaggtgttaggggccctcaaggccctccagggcctccaggacctccaggg
cccatcgtaacagttcctcctgatggcggacctggcccagatgaaggtggaccagaccca
attagtatcgttagtgagattcgcagccaagattccaaaggaccaataggaataatccaa
acagttaaaggagaacgaggagtagatggtccccctggtttaagaggatctcctggttta
agagggccagagggagaacctggagctcctggagcaataggtcccccaggagcaactggc
aaaccaggacaagcaggtccaccaggcagctcaggtgaaccaggaatgaatggggcagat
ggtatacctggacctgcaggtcaagcgggggacagtggacaacaaggaatacaaggacct
ccaggtgttccaggtgtccgtggtctttctggtgtaaaaggagatcgcggagaacaagga
ggtcaaggagccccaggcgaccggggtgaacctggtggagggggatttagaggtgaaaat
ggtaggcctggtgcagatggagcaccgggtgcccaaggacttcgaggacaaactggggaa
gcagggtcaataggaaatccaggattacctggagctataggcacaccaggcccagaggga
cctgctggtgttccaggagagactggaaattctggaagcaatggagcccctggtgccaaa
ggtgaccaaggtgctccaggaccggctggtccaactggacgacaagggccgcggggagag
cctggaaaggaaggtcctaaaggagatgctggacaaacgggacagcctggggctgagggc
agaccaggctacaagggtgatatgggagcagcaggagctatgggaccacttggtgatatt
ggaccagaaggagcaccaggaaatcccgggtcacctggacaacctggaagaaggggagac
ttgggagcacctggtcgccctggaaaaagaggatcagaaggagccaagggttctgtagga
accaagggaaatgctggagggataggtgttagaggccctccaggcaagaggggtaaacaa
ggaaggtcaggaaaaagaggaaatattggtgaaccaggagcacagggcagccaaggagaa
ggtggttaccgaggagcagaaggaagagcaggtgaaaggggtgcccaaggtcctccaggt
gctgatggtttatcaggagccaaaggtgaccagggaaatccaggtgatcttggtgaaaca
ggaaggccagggataaggggatcgcaaggtccagctggcaaaccaggaagacctggtaat
actggagcaccgggtcaagcaggagatgatggccgacctggcgcagtaggtactcctggc
cctccaggtgcacagggtatcccaggattcagtggagccaaaggatctatgggaaatcca
ggacgagatggtgctcccggtgctcggggctctagaggagcgaagggtagcatgggttca
agaggtcaacaaggaaagccgggaatccctggaagagagggtcgtcgaggagaaagagga
gaactgggtcttcaaggacctgcgggagaacagggccctggaggaaacgtaggaccgact
ggtgtacctggtaatacaggaaatccgggtgtacgaggagagaggggaaaagatgggagg
gcaggagaagcgggtaaccgcggacaagctggagaacccggacctatgggcgcaccggga
gacaaaggacctgaagggaagcgaggagcgacaggctcgtcgggatcaccgggtttccca
ggacttcctggtagacctggtggctccgggaaaaaaggagagcctggatctcctggtgcg
gctggtcctcctggttctgatggaaacgatggtgttgggggttcggatggggttcctgga
agtgttggcccacctgggttgcctggaccaaagggacaagatggtactcctggaactcct
ggactgagaggaaaacgcggcgatcagggattacgaggccccgttggctcgccaggcact
cctggacgatctggaatgccgggacaaactggaccgcggggacaaatcggtttgaaagga
aatgttggcgagaagggacgcaaaggagacgaagggccacttggttctaaaggaccacaa
ggtggcgcgggggattctggtctcgaaggtgaaaaaggaggcgtgggcaaaccgggtgac
ccgggaatcagaggttcctctggaccacctggtcagcctggagctcagggaccccctgga
ccagtgggactttcaggatcgcctggaaaaccaggacttaacggtgtaaagggtgcacgt
ggacctgtcggaagaagtgggctgcctgggcttcctggacaagtgggattgcctggtcga
gatggaacccctggagtcagtggtgcagacgggcgtgtgggaaatcttgggccaaccgga
cccatgggccctaagggtgatactgggcgcgagggtgctccaggccctcccggtcgcact
ggtcctgagggggcagtgggtgaagcgggttctggaggtgttccaggatatagcggaaat
cctggagaaagcggcagaacgggttaccctggtccccatggaagacctggcacagacgga
gcaaagggtcaaccaggtgcaaatggtttcgacggaactccgggaactcctggtgagaat
ggagaagggggcaaccagggcgagagagggtcaccaggccctaacggagtggctggagct
agcggaccgcctgggccaaccggtgaaaaaggagaaggtggcccacaaggggaaacgggt
gacagcggtgtgaacggtgaccctggcaaaattggagaacgaggccgtgatggtgtgatg
ggtgacccaggcgagcaaggagagcctggaattataggagaaaggggagatggtggatat
accggaaagtccggaaacatgggacgcatgggctttgaaggcgaggttggagcaccggga
agaaacgggtcagaaggccccgctggtcctcagggcccattgggagcgcaaggaacgcct
ggtcaagatggatttgctggagaggagggcgtaacaggacctcgaggcgatcccgggaaa
cggggtgtgcgtggatcaacaggcagagatggaatagagggagacccaggtgctgccggt
ccgccaggacctatgggtcctcctggatcttatctcatcggtgaaattataaatggagca
aacaagggacccccaccaaactttcgactgtactcgagctcagagagtacttcacctcga
gaagaaactcgtttgcttgagcaccctgagatgaaaaaggtcctggatggtcttacaaaa
catactgatctgtatagaaggcaaaaaggcagcaagtatcacccggcacgctcgtgtcga
gatttgcagcttgatctggatagtaacgatactgtacacagcggcttttactggatcgat
cctaatgaaggttgcatcagtgatgctgaatacgtttattgcgactttgaaaacagcaga
gtttgtgtacatccgaaaaaagaaaacattaccatagatgatccgaaggccaagcaatgg
atcagcgaagttcacccggatgtggagcttatttcatacaacatggaacctgtacagatg
aggttcctgcgtcttttgagcatgcgcatcactcagaacgtaacttatcactgctacaac
tcccgtgcatgggaagatgataatgaccgcaccattaaactccaaggagaaaacgaaatg
gaattaacatcatctgagaaaacaaagcccaaagttgtcacaaacagctgtgataataaa
gatagttcttggcatcaaactgtcctcgagatagacacgacacaaaagaacgccttgcct
gttgtggacgtagcagcttacgatgtgggagacaagctcgtggaacagaaattcactatc
caacttggaccagtgtgttttgtgtattag

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