Stylophora pistillata (Smooth Cauliflower Coral): 111320870
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Entry
111320870 CDS
T05774
Name
(RefSeq) collagen alpha-2(I) chain-like
KO
K19719
collagen type II alpha
Organism
spis
Stylophora pistillata (Smooth Cauliflower Coral)
Pathway
spis04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
spis00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
111320870
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
spis00536
]
111320870
Glycosaminoglycan binding proteins [BR:
spis00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
111320870
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
VWA
COLFI
VWA_2
VWA_3
WAP
Motif
Other DBs
NCBI-GeneID:
111320870
NCBI-ProteinID:
XP_022779334
LinkDB
All DBs
Position
Unknown
AA seq
2356 aa
AA seq
DB search
MGPLEAITTVFVFGLLLARIRTQSVCPNVTKYGAECPLDLDNECESDDSCSGDLKCCPSI
YDDEACQLLCLSPQPQTSCPVSLDFAFILDGSGSISKKNWGKIKEFVKRVMDAFDVSPDG
THFALLEYSTDPKVYLRFNDFTDAQLNVVNVKRKVEEIIQSKGKTFIDKALELANQEIFT
AEGGMRADVKQIALVLTDGTQTEEPSPVAAAENLIAAAQQLHDKGIDVIALGIGKNVNPF
QILNIASDENNIYTAEKFEELLNLVAGELTRRECLACSEPVDVVFGIPTSQSIPAGQFES
MKYFVNETIDSFDVGPLKVHVGFVTYSSSAQTTAAINQLDTKEDLESFTSRLSQRGKSAN
VVSALDEAYSSTFTIYGGVRQSKPKVFILIVPEGSVSGQQEVLQAATRLKSLGVRLLTVG
VGQNVDQNLYALASTQPPSKFFYSVPDHKKLGEKSRVVADVLCKGKVGKCPLPSLPPEFC
PRNPDDECDVDADCNSGGGSPLCCLNGCGGRQCLGQIRSCFVPMDVAIAVDNSDATTSSE
FNNVKRFLKQFINQLASSEVRFSLLEYGNTANVITDFRSSRDQIYLENLIDNMAKRNDSE
RRVDAALNTTKEKIFSLAGGIRHGHPRYLVFVSSGGPTAEFIVLEGAGKKLRDLGVTFVA
IGTNTGVPGAFLQKLGGDSRFIYRAEEPSQLGGIVLEDLSRKLCAEKPGTCPVVDATPDP
LACQVMQPDPEETIVCGLSANGGGPSENYDWDCPGEMKCCLDPQTGCFQVCLEPENVCSK
QFDLTIVMENSARIDEDQLEQVKDFSKQFVNAFDVREEGTHVAIVSYGTAPVVHTRFDSY
SGPVLSKEKITDDIDKIVFESGNAVTTNTALTEVFKTVYGDGNGARNGTNKTVVLITAGN
LSDPMTAVDAAIDIRAMPADLFVVAIGEDPDVDALVQIVSPPAENNVFLATTSGDLRPSL
RTITDTVCEGAEKMSTIIGPPGDPGVAGNPGPEGPAGPRGDPGDPGEPGEAGEPGPLGPP
GPPGPPGSPGGGGGGTIGSLRPPGEKGPINNEKGPVVPPMILPIRQQARQGPPGRPGIPG
PRGPRGPPGIPGYRGRIGARGPRGRVGLIGPVGRPGRRGTEGAPGKRGNPGILGEPGEKG
QSGDSGEEGHSGLKGHKGRRGQTGPIGERGEEGETGMQGVNGAPGTNGKPGKKGPHGITG
KQGSTGSPGSPGAKGVEGEEGDQGAAGKPGSPGTPGVVGQKGESGTSGLVGYTGYQGDSG
NTGPMGPKGTAGSDGEIGEQGPIGGKGSIGDNGSPGEMGAQGLDGREGSTGTEGPRGYQG
STGNPGIPGKRGEVGVKGKPGNSGRPGSPGRRGPRGKRGAYGDTGAKGTMGIIGSRGPAG
SEGPMGSPGERGVKGVPGIEGSRGYSGRQGERGDMGDYGPLGVQGEQGPPGLTGRTGRSG
SPGLHGEEGDSGKPGEVGPLGASGSPGISGPVGTEGELGKPGDAGEQGEAGPEGPKGALG
PSGTIGSPGVAGQQGSGGAVGEAGDTGLPGGEGLPGFPGSKGDDGSPGAKGSKGDDGMNG
VPGSQGPMGKSGDKGSSGKNGVPGASGERGDQGKSGQIGVPGPMGQPGILGPVGRVGSMG
APGHSGDAGSKGEMGMRGPHGKRGKRGSNGQPGKDSFMGSRGAKGSRGEKGVTGEGGLPG
MPGNNGNLGPRGDRGDQGGPGFEGTEGSAGPVGNQGRQGDPGIKGSLGEDGLPGPAGEQG
IRGAPGYRGTNGPLGDRGPLGGNGAPGGMGSPGATGPSGELGAAGIPGLDGKPAQAGSLG
NRGMPGSRGERGIPGRPGRDGVLGGTGDSGPQGQRGEGGPSGPPGRTGQMGLHGLIGARG
IIGEVGSKGDTGDPGASGKDGATGKQGEAGRPGRRGSPGDRGKEGTLGSGGPIGNPGRDG
FKGVPGEPGGHGTTGQPGLPGIAGSPGMRGSPGSSGMDGGRGESGGLGSKGLAGEAGDAG
EPGENGETGIVGNKGDRGDPGQRGPSGKPGLKGPEGSVGQKGNRGRTGPRGEDGALGRAG
IQGSQGSQGIDGLSGFPGERGDAGHRGPEGDRGMPGPTGPPGPPADIRSLSGYVQRLNNR
GTGSYSIENEKAKLYRGSKDQSGEALIDPVKLTLALMHYELEMYKQPNGTKEFPARTCRD
LVACYPGLTSGDFWIDPNEGVPDDAVKVYCDFSFNATCLHSNNEKKPFTIRKRKWFLGPD
EYKWLGADLGAFNKIKYVKYSSQISFLRLLSDRARQSITYHCKNSVAWYDQQLNDVTKSL
KIMTDNGVIIHSSSSNKFKPSVLADNCQVKNGTWLYTIIQVDTPKPNRLPVRDVAAYDIG
DENEEFGLEIGPVCFY
NT seq
7071 nt
NT seq
+upstream
nt +downstream
nt
atgggtccattggaggcaataacgacggtatttgtcttcggactgctgctcgcaagaata
cgcacccagtctgtctgcccgaacgtcaccaaatatggtgcagaatgcccactggaccta
gacaacgagtgtgaatcagacgactcgtgttctggggacctcaaatgctgtccctctata
tatgatgacgaagcgtgtcaactgctctgcttatcacctcaaccacaaacctcctgccct
gtttccttggatttcgccttcattttggacggctcaggaagcatctccaagaaaaattgg
ggtaaaattaaggagtttgtcaaacgcgttatggatgcgttcgacgtttctccagacggc
acccactttgcgctgcttgagtacagtacagatcccaaagtttacctcagatttaacgat
ttcaccgatgcacagctcaatgttgtgaatgtcaagcgaaaggtagaagaaatcatacaa
tcgaaaggaaaaacattcattgataaagccttggagttagcgaatcaagaaattttcacc
gctgaaggtggcatgagagcagatgtcaagcagattgctctggtgctaacagatggtacc
cagaccgaagagcccagtccagtagcagcagcagaaaaccttattgctgcagcccaacag
ttgcatgacaaaggaattgatgtcattgcgcttgggatcggaaagaacgtcaaccccttc
cagattttaaacatagcttccgatgaaaacaatatttacactgcagaaaaatttgaagaa
ctcctgaatctcgtcgcgggagaactgactaggcgagagtgcctagcttgttcagagcca
gttgatgtggtatttggaattccaacttcccaaagtattcctgcgggccagtttgagagt
atgaagtatttcgtgaatgaaaccatcgattcgttcgatgtgggtcccttgaaagtacat
gttggttttgttacttacagttcctccgcacagacaacggcggccatcaaccaactggac
acaaaggaggaccttgaatcctttacttctagactcagtcaacgagggaaaagtgctaac
gtggtctctgcactggatgaagcctacagcagcacctttaccatatatggcggtgtaaga
cagtccaaacccaaggtgtttattcttattgttccagaaggttcggtcagcggtcaacag
gaggtactacaagccgcaacaaggcttaagagccttggagtaaggttgcttaccgtagga
gttgggcaaaacgttgaccaaaacctctatgcgcttgcgtcaactcagcccccttcaaag
tttttttacagcgtcccagatcacaagaaactgggcgaaaaaagtagagttgttgcagat
gtgctttgtaaaggtaaagttggaaaatgtcccctaccctctcttcccccagaattctgt
ccaagaaaccccgatgacgaatgtgatgtcgatgcagattgtaactctggtgggggttct
ccgctgtgttgcctgaacggctgtggtggacggcaatgtcttggacaaatcagaagttgc
tttgttccaatggatgtcgccatcgctgtggacaattccgacgcaacaaccagcagcgaa
ttcaacaacgtgaaacgattccttaagcaattcattaaccagcttgcgagctcggaggtt
cgattttccttgcttgaatatggcaacactgctaatgtaattacagattttcgcagctct
cgtgaccaaatctatctggaaaatctcatcgataacatggccaaacgcaatgactctgaa
cgcagggtagacgctgctctgaacacgaccaaagagaagattttcagcttagcaggagga
atcagacacggacatccacgataccttgtcttcgtaagctccggaggcccaactgcggag
ttcatcgttctcgagggagctgggaaaaagctacgtgatttgggcgtgacctttgttgcc
ataggaacgaatacgggtgtccctggggcttttttacaaaagctaggaggcgacagtcgt
ttcatctacagagccgaagagccgagtcaattgggtggaattgtcttagaagatttgtcg
cgtaaattgtgtgcagagaagcctggaacatgtccagtagttgacgcgaccccagaccca
cttgcgtgccaggtgatgcaaccagacccagaagagaccatagtctgtggcctatcggca
aacggaggggggccttcggagaattatgactgggactgtcccggggaaatgaaatgctgt
ttggatccgcaaaccggctgctttcaagtatgcctcgagccagagaatgtttgcagcaag
caatttgatctgacgatagtgatggaaaattccgctcgaattgacgaagaccagttagag
caagtaaaagacttcagtaagcagttcgtcaatgcattcgatgttcgcgaggaagggacg
catgtggccattgtgagctatggaactgcaccagttgttcatactcggtttgactcctac
agtggtcctgtgctcagtaaagaaaaaatcacagatgatatcgacaaaattgtctttgag
agtgggaatgctgtgacaactaacactgccttaacagaggtgttcaagacagtttatggt
gacggaaatggggcgcggaatggaaccaataagacagttgttcttataactgcgggcaat
ctgtcggaccccatgacggctgtcgatgctgccatcgacatcagagccatgcctgctgac
ttgtttgtggtagcgattggtgaagacccggacgtggacgcccttgtgcagatagtgtcg
ccaccagctgaaaacaacgtgttcttggcgactacctctggtgacttacgacccagcttg
cggacaattacggacacagtctgtgaaggagctgagaaaatgtcaacgataattggaccg
cctggtgatcccggagttgctggtaacccgggtccagagggaccagccggaccaagaggc
gatccaggggaccccggagagccgggagaagccggagaaccagggcctctgggaccacca
ggaccaccgggaccaccgggatcaccgggtggcgggggagggggaaccataggttccctg
aggcctccgggggagaaaggacccataaataatgaaaaaggtcccgttgtgccacccatg
atccttcctatacgacaacaagctagacagggacccccaggacgacctggaatacctggt
ccgcggggaccacgaggtcctccaggtatcccagggtatcgaggccgaataggagccaga
ggacctaggggccgagttggtttgataggaccagttggtcgcccaggacgacgcggaaca
gaaggggcaccggggaaacgaggaaatcctggcattcttggtgaacctggagagaaaggc
cagtcaggtgactctggggaggaggggcactcaggcctcaaaggacataaaggtcgtcgc
ggtcaaactggtccgataggagaacggggagaggaaggagagacgggcatgcaaggtgta
aatggcgctccaggaaccaacgggaaacccggaaaaaagggacctcatggaattactggg
aagcaaggaagtacgggatcccctggttctccaggagctaaaggtgtcgagggcgaggaa
ggtgaccagggcgcagctggtaagcctggctctccaggtactccaggagttgtgggacaa
aaaggagaaagcgggacgagtggtttggttggatatacgggttaccaaggcgacagtggt
aatactggacctatggggccgaaggggacggcgggaagtgacggagagattggagaacag
ggaccgattgggggaaagggttccatcggtgataatggatctcccggagaaatgggtgca
caaggacttgacggtcgggaagggagcactggtacggagggacccagaggatatcaagga
tccacgggaaatccagggattcctggaaagagaggagaagttggtgtaaaaggcaaaccg
ggtaacagtgggagaccaggatcacccggaaggcggggacctcgagggaaaaggggagct
tacggtgacactggcgccaaaggcaccatgggtatcatcggttcaaggggaccagcagga
tcagaaggacccatgggatcccctggggaacgtggtgttaagggagtgcctggaatagaa
gggtcgcgagggtattcgggaagacaaggtgaaaggggagacatgggagattatggacct
cttggagttcagggagaacaggggccgccaggactgactggaagaactggtcgatccgga
tcacccggtttacatggcgaggaaggggattctgggaaacctggtgaagtcggtcctctg
ggagcctccggaagcccaggtatatcgggtccagttggaaccgaaggcgaactgggaaag
ccgggagatgctggagaacaaggagaagccgggcccgaaggacccaagggagctcttgga
ccaagtggaacgataggttcccctggagtagctggtcaacaggggtccggtggtgcagtt
ggtgaggcaggtgacactggattaccagggggagaggggttaccaggcttccccgggtca
aaaggagatgacggaagtcctggggcaaagggatctaaaggagacgatggcatgaatggt
gttccgggaagtcagggaccaatgggaaaatctggagacaaaggatcaagcggaaaaaat
ggtgtgcccggcgcctcgggtgaacgcggtgaccaggggaaatctggacaaatcggggtg
cctggtccgatgggtcagcctggaattctgggtcctgtgggacgtgtaggttctatgggt
gctcctggtcattcaggtgacgccggctccaagggtgaaatgggtatgagaggccctcat
ggaaagcgcggaaaacgaggatcaaacggacaacccggaaaggacagttttatgggatca
cgtggagctaaaggaagcagaggagagaaaggagtgaccggtgaaggtggtttgccagga
atgccagggaacaatggcaacttgggtccgcgtggagataggggtgaccaaggcggcccc
ggatttgaaggaaccgagggaagtgcaggacctgttggtaatcaaggacgacaaggagat
ccaggcataaaaggatcgctaggcgaggatggactgccgggacctgcaggtgaacaaggc
attcggggcgctcctggttatcggggtacaaacggacctttaggggaccgagggccactg
ggaggcaacggagcaccaggtgggatgggatctccaggggccacagggccatcgggagag
ttgggagccgcaggaatacctgggttggatggtaaaccagcacaagcggggtcacttggt
aacagaggaatgccgggaagtagaggagaacgtggaatcccgggtcgtcccggacgtgat
ggtgtacttggcggtacaggagacagcggtcctcagggtcaacgaggcgaaggtgggccc
agcggaccacctgggcggacaggacaaatggggctgcatggattgattggcgctcgggga
atcattggtgaggttggctctaagggtgatacaggagatcctggtgcgagcggaaaagat
ggagccacaggaaagcagggggaggctggaaggccaggtcgaagaggttcccctggagac
agaggaaaagagggcactttgggatctggaggacccatcggaaatcctggacgtgatgga
tttaagggtgtaccaggagaacccggtggacatggaacaactgggcagcctggccttccc
ggaattgccgggtccccagggatgaggggaagccctggatcgagtggcatggacggagga
agaggagagtcaggcggtttgggatccaagggattagccggtgaagcaggagatgctggt
gaacccggcgaaaatggagaaactggaatagttggaaataaaggagaccgcggtgatcct
ggtcagaggggtccctcgggaaaaccaggcctgaagggaccagaaggatctgttgggcaa
aaaggaaacagaggtcgaaccggaccaaggggcgaagacggagcgttgggacgagctggt
atccagggctctcaaggttcacagggaatcgatggtctgagtggttttccaggagaaagg
ggcgatgctggccacaggggacctgaaggagataggggtatgcctggacctaccggaccc
ccaggacccccggcagacataagatctctcagtggctatgtccagcgcttgaataaccga
ggcactggctcttacagcattgaaaatgaaaaagcaaagctgtacagaggttcaaaagat
cagagcggagaggctttaatagatccagttaaacttacgttggctttgatgcattacgaa
cttgaaatgtacaagcaacctaatggcactaaagaatttccagcccgtacgtgtcgagac
ctcgtagcatgttatccaggtctcaccagcggtgacttttggattgacccaaatgagggc
gtgcccgatgatgctgtcaaagtttactgtgacttctccttcaacgcaacttgtttacac
tccaacaatgaaaagaagccattcacgatcagaaagaggaaatggttcttaggacctgac
gaatacaaatggcttggagcagatcttggcgcctttaacaagatcaagtacgtcaaatac
tccagccaaatctcatttcttcgcctgctgagtgaccgcgcccgccagtctataacctac
cattgcaaaaactctgtagcctggtatgaccaacagcttaatgacgtcaccaagtcatta
aaaatcatgaccgataatggtgtgattatacactcgagttcgtctaacaagttcaagccc
agtgtactcgcagacaattgtcaagtaaagaacggcacgtggctttacaccataattcaa
gtggacacgcccaaaccaaaccgacttccagtacgagatgtagctgcgtacgacatcgga
gacgaaaacgaagaatttggactggaaattggacctgtttgcttttattaa
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integrated database retrieval system
