Stylophora pistillata (Smooth Cauliflower Coral): 111321270
Help
Entry
111321270 CDS
T05774
Name
(RefSeq) protein PAT1 homolog 1-like
KO
K12617
DNA topoisomerase 2-associated protein PAT1
Organism
spis
Stylophora pistillata (Smooth Cauliflower Coral)
Pathway
spis03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
spis00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
111321270
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spis03019
]
111321270
Messenger RNA biogenesis [BR:
spis03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
111321270
mRNA degradation factors
5'-3' decay
Decapping complex
111321270
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAT1
RNA_pol_Rpb1_5
TRY5_TPR
Motif
Other DBs
NCBI-GeneID:
111321270
NCBI-ProteinID:
XP_022779839
LinkDB
All DBs
Position
Unknown
AA seq
845 aa
AA seq
DB search
MADPLYGFSSEIPAFEDEELSELDPSLTNLAEGDEYDQLNDDTFGDGALEDDWEFGHRKL
AGLPLEDEASERAQFEEWLKKKGLGSTGDGPGAKFVERNIEEDFEDDLDREEEILEQNLT
KLVDDDDGDSIPVPKASSKYKDIKHPSGINPAWDGTSPLSSPTSATSLHDLISPSSNIWG
SPSKLDKENTNKGPANTQSPLAELLKAEGEKKHVPSRPFSPAFEDDSIVQAVPRQSLIPP
SRFTTKPHPANAIKLEDLEKELTTGREGAPQQVPEVVRQTPHNSMIGRPPPGIPRPMMTP
PGFSSPVARMSTPRMPPQMFQQRPNPSKHPMPSMSGMPGMPRMPGMPGPSPHLMRTPRTP
HYPRHPFPMVHSDPGHLMMRGGMMNFPLSPHHQRFSSPQFPNRRFQDPRQNYQRQHYDGR
MSNDNHSPRQQDRGEHHHQFTDLEKKIHSILTAAESGPNRFDPYAGIMSRREKEWLIKIQ
LLQLTSNEPELDDYYFQTYTRRKAAKERSKQSEGVQQNVEDNRASGAPRNMALPQFEREK
KSYTPLDFQGTLGKVSSSSVQHPRQMVDLMHLSKASEQEKQGSSTPLKDTKRRSQLLLNI
EKGYDYLLNIESLEKRLILVGEKERKELYETRQNNVKKLFDLLKLSTEGSSKGDDELFVQ
FTSVSKGKRLLCRALSLFSTVQMEAVLMAITRNISSLIKKDNSEQSWQHLMVPLNRACEL
ASPSVVIECLKDMVSTPSISNSQGSLSAVLLNQFGVGVLSILLGRAAVISSSLTESDDDM
RKSWLSIVSQVASKFQDLPVKQLGRNLVAADRLVALLSTCTDVQTKALLQEHLRLAASAK
SEISA
NT seq
2538 nt
NT seq
+upstream
nt +downstream
nt
atggcggaccctctgtacggtttcagttctgagattccggcgtttgaggacgaagaattg
tctgaattagatccatcgctgacgaatctcgcggaaggagatgaatatgatcaactaaac
gacgatacattcggcgatggagcattagaagatgattgggaatttggtcacagaaaactt
gcaggtttgccattagaggatgaagcctcagaaagagcccaattcgaggagtggctaaag
aaaaaggggctcggatcaacaggtgatggtcctggggcaaagtttgtagagagaaacatt
gaggaagattttgaagatgacttggatcgagaagaggaaattcttgagcagaacttgaca
aaactggtagatgatgatgatggtgactctatccctgtgcctaaagcttcttccaagtac
aaggacatcaagcacccctcaggcattaacccagcctgggatggcacatcacctctctcg
agtccaacttcagctacttctttacatgatttgatctctccatcttccaatatttgggga
tcaccttctaaacttgacaaggaaaataccaacaaaggaccagctaatactcaatcacca
cttgcagagctgcttaaggcagagggtgaaaagaagcatgtgccaagcaggcctttctca
ccagcctttgaggatgactcaattgtccaggctgttcctcgccaaagccttataccacca
agtcgtttcacaacaaagcctcatccggctaatgcaatcaaactagaagatctggaaaag
gaactcacaacaggtcgtgaaggtgcccctcagcaagttccagaagtggttaggcaaaca
cctcacaattccatgataggacgaccacctcctggcattccaaggccaatgatgacaccc
ccaggtttctcttctccagtagcaaggatgagcactccacggatgcctccccagatgttc
caacaaagacctaatccatcaaaacatccaatgccaagtatgtctggaatgcctggcatg
cctagaatgcctggtatgccaggcccaagccctcacttaatgagaacaccaagaacacca
cattacccaagacatccatttcccatggttcactcagatccaggtcacctgatgatgagg
ggtggtatgatgaattttccattgagtccacatcaccaaaggttcagtagccctcagttt
ccaaacagaagatttcaggacccaagacagaactatcaaaggcaacactatgatggcaga
atgtcaaatgataatcactcacccagacagcaggacaggggagaacaccatcatcagttt
actgatttagagaagaaaattcacagtattttgacagcagctgaaagtggcccaaaccga
tttgatccctacgctggtatcatgtcaagacgagaaaaggaatggttgattaagattcag
cttcttcaactcaccagcaatgaaccagaactggatgattattattttcagacatacacc
aggcggaaggctgcaaaggaacggtcaaagcaaagtgagggcgtgcagcagaatgttgaa
gataacagagcaagtggagcgccaagaaacatggccctacctcagtttgaacgagagaaa
aagagctacactccactggactttcaaggtactttagggaaggtgtcttcatcgtctgtg
caacatccaagacaaatggtggatctaatgcaccttagtaaagcatctgaacaggaaaag
caaggaagttcaactcctttgaaggataccaagcgacgaagccagctcttacttaacatt
gaaaagggttatgattaccttttgaacattgaaagcttagagaaaaggttgattcttgtg
ggagaaaaagagaggaaggaactctatgaaaccaggcaaaacaatgtgaagaagctgttt
gatctcttaaagctctccacggagggttcttcaaagggtgatgatgaactcttcgtgcaa
tttacatctgtttctaagggtaaacgtctcctctgtagagctctatccttatttagcacg
gttcaaatggaagctgtgctgatggcaattactaggaacatttcatctttgattaaaaaa
gacaacagtgaacagagttggcagcatttaatggttcctcttaatcgcgcttgtgaactg
gcatctccgtcagtcgtaattgagtgtcttaaggacatggtgtccacacccagtatctct
aactcacaaggatcacttagtgcagtgcttctcaatcagtttggcgtaggagttctgagt
atactgttagggagagcagccgtcatttctagcagtttaactgaatcagatgatgacatg
cggaaatcctggttaagcattgtttctcaagtggcaagcaagtttcaggacctgccagta
aaacagctgggaagaaaccttgtagcagccgacagattagttgcgcttctgtcaacctgt
acagacgtacagaccaaagctttactacaggagcacttgagattggctgcctctgctaag
tcagaaatctcggcgtag
DBGET
integrated database retrieval system
