KEGG T05774: 111321408

Stylophora pistillata (Smooth Cauliflower Coral): 111321408

Entry

111321408         CDS       T05774

Name

(RefSeq) cleavage and polyadenylation specificity factor subunit 4-like

K14404

cleavage and polyadenylation specificity factor subunit 4

Organism

spis Stylophora pistillata (Smooth Cauliflower Coral)

Pathway

spis03015

mRNA surveillance pathway

Brite

KEGG Orthology (KO) [BR:spis00001]
09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    111321408
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:spis03021]
    111321408
   03019 Messenger RNA biogenesis [BR:spis03019]
    111321408
Transcription machinery [BR:spis03021]
Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Transcription termination factor
     111321408
Messenger RNA biogenesis [BR:spis03019]
Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     111321408

SSDB

Motif

Pfam:

zf-CCCH zf_CCCH_4 Torus zf-CCCH_3 zf-CCHC zf-CCCH_4 zf-CCCH_2 zf-C2H2_10 zf-CCHC_2 zf-CCHC_3

Other DBs

NCBI-GeneID:

111321408

NCBI-ProteinID:

XP_022780015

LinkDB

Position

Unknown

AA seq 271 aa
MEDIVASVADLKFEIEMQLYNQVGVQPLPFPGMDKSGAAVCEFFMRNMCNRGAVCPFRHT
KGEKTVVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYFYSKFGECSNKECQYLHIDPESK
IKDCPWYDRGFCKHGPSCRHRHVRRVICLNYMCGFCPEGPKCKHMHPRFELPVKDESSEK
KAMNIVCHYCNQPGHKASSCPTNPQKENFKNQQVMHPNINLSIVPVTTNAHLDADRPTMR
RPLETVTCFKCGDKGHYANKCPKSRSELIGL

NT seq 816 nt +upstreamnt +downstreamnt
atggaagatattgtagcgagtgtagcggatctcaagtttgaaattgagatgcagctttac
aaccaagttggagttcagcctcttccgttcccagggatggacaagtctggtgctgcagtt
tgtgaatttttcatgaggaacatgtgtaatcgaggggcagtgtgtccttttagacatacc
aaaggtgaaaagacagttgtctgcaagcattggctgagagggctttgtaaaaagggtgat
cagtgcgagtttcttcatgaatatgacatgacaaaaatgcctgaatgttacttttattcc
aagtttggcgaatgcagtaacaaggaatgccaataccttcatattgatccagagtctaaa
ataaaggactgtccttggtatgacagaggattctgcaagcatggtccgagctgtaggcat
cgacatgtgaggagagtgatttgcctgaactacatgtgtgggttttgtcccgaagggccg
aaatgtaaacatatgcatcccagatttgagctacctgtaaaagatgaaagtagtgagaaa
aaagccatgaacattgtatgtcattactgtaatcaacctggccacaaagcatccagctgt
ccaacaaatccccaaaaagaaaactttaagaatcaacaagttatgcatccaaacattaat
ttaagtattgttccagtgacaacaaatgcacatttggatgctgatagaccaacaatgaga
cggccgctagaaacagtcacttgtttcaagtgtggtgacaaagggcactatgcaaacaag
tgtcccaaatcaagatcagagttgattggattatga

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