KEGG   Stylophora pistillata (Smooth Cauliflower Coral): 111321597
Entry
111321597         CDS       T05774                                 
Name
(RefSeq) THO complex subunit 6 homolog
  KO
K13175  THO complex subunit 6
Organism
spis  Stylophora pistillata (Smooth Cauliflower Coral)
Pathway
spis03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:spis00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    111321597
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:spis03019]
    111321597
   03041 Spliceosome [BR:spis03041]
    111321597
Messenger RNA biogenesis [BR:spis03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     111321597
Spliceosome [BR:spis03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    111321597
SSDB
Motif
Pfam: WD40 WD40_WDHD1_1st WD40_CDC20-Fz WDR55 WD40_Prp19 Beta-prop_EML_2 Beta-prop_EML Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd EIF3I NBCH_WD40 Beta-prop_TEP1_C ANAPC4_WD40 Beta-prop_WDR75_1st Beta-prop_IFT140_1st Beta-prop_EIPR1 Beta-prop_SPT8 Beta-prop_DCAF4 Beta-prop_SCAP Beta-prop_IFT122_1st UPF0506
Other DBs
NCBI-GeneID: 111321597
NCBI-ProteinID: XP_022780267
LinkDB
Position
Unknown
AA seq 362 aa
MKGQSDKVVFVSADFLEAANTKMAADLQNQIYQKRLELHTIVFAVAFSPCGNFLAACNNF
GQIAVFSITSALAPDASSDKKRPIIFFQGHSNPIYSLISTDKFLISGGSSEIHGWRWDEI
LDKTEAPSPAWTLQPPAARASLDIPETNALVFAEQEDTLFSGCGDNNIYLWDLESGTCKN
TLSGHWDYIQCLTLRTKHSQCVSGAEDGTVRLWDYRTKGFMTDIIEPCKNEDIHRPHLGS
WIGCVTVDESEDWLVCGGGPSLSVWHLRSMTCTSVLKTASSQQSALLHDDLILSAGSEPT
VFHWQINGDPKTHVPCTPNSVFTMQINDKSPKNKVLAVGGYSADIDVFTNFGYKALSFKF
SH
NT seq 1089 nt   +upstreamnt  +downstreamnt
atgaaaggacagtcggataaagttgttttcgtgtcagcggatttcctagaagcggcaaat
acaaagatggcggcagaccttcagaatcagatctatcagaagcgtctggaacttcacact
atagtgtttgcagtggccttttcaccatgtggcaatttcttagcggcgtgcaacaacttt
ggacaaattgcggttttcagcattacctctgctctagcaccggatgcttcatctgacaag
aagagaccaataatatttttccaaggtcacagcaacccaatttacagtcttatatctact
gataaatttctaatcagtggtggttcatctgaaatacatggatggagatgggatgaaatt
ctagataaaacagaggctccttctcctgcctggacactgcaaccccctgctgccagagca
tcactggatatacctgaaaccaatgctctagtatttgctgagcaggaagatacactcttc
tcaggttgtggggacaataatatttatctgtgggaccttgagtcggggacatgtaagaac
acactctctggtcactgggattacattcagtgccttaccctcagaacaaaacacagtcag
tgcgtaagtggagcagaagacggcactgtgagattatgggattacagaacaaaaggattt
atgactgacatcattgaaccctgcaaaaatgaggatatacacaggcctcatttggggtct
tggataggatgtgttactgttgatgagagtgaagactggctggtctgtggtggtggccca
tccctgtcagtgtggcatttgaggtcaatgacttgtacaagtgttctgaaaacagcttca
agtcaacagtctgctcttttgcatgatgaccttatattgtctgcggggtcagaaccaaca
gtgttccactggcagattaatggggatccaaaaacacatgttccttgcacaccaaactca
gtttttaccatgcaaatcaatgataagtctccaaagaataaggttcttgcagtgggtggc
tattcagcagacattgatgtttttacaaactttggctataaagcactatcatttaaattt
tctcattaa

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