Stylophora pistillata (Smooth Cauliflower Coral): 111322505
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Entry
111322505 CDS
T05774
Name
(RefSeq) vacuolar protein sorting-associated protein 13C-like
KO
K19525
vacuolar protein sorting-associated protein 13A/C
Organism
spis
Stylophora pistillata (Smooth Cauliflower Coral)
Brite
KEGG Orthology (KO) [BR:
spis00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
spis04131
]
111322505
Membrane trafficking [BR:
spis04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
111322505
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VPS13_M
VPS13_VAB
VPS13_C
WWE
Motif
Other DBs
NCBI-GeneID:
111322505
NCBI-ProteinID:
XP_022781347
LinkDB
All DBs
Position
Unknown
AA seq
2830 aa
AA seq
DB search
MDVRFSSFQVSGFSQVEKHLNEHLIEPVELNVIVKRRLELDVSDLPLIEVEGSLELFKMN
LGVNDFQMFMMVLNDNLLEGQNERTPATKTDGADKEEKKQQNLSDSTDAKSIDEVSNIKC
HFTLSKLQVTSPKVVDGVCKPYLVLETNNMSATVTMETWILNASAKLGAIELVDHLNKGA
DGLPVKVLSSSQDTDLISVSYKRVDPRCPEFESTFCTIEQQINVSFSKLKIDCLQKGLMD
LQMHGLALLSSFGDSSSALSSDSASNADSEQIKQSTVSLKVNAELSEVDVLVRISHKNLA
SIKVEGLTAEFLLWDGGMVLKSRQNDLSVIDLNSQTYYPKIISVENENVFDFEFKYFDKA
NLPKSDPSPADLTRLDGNLELNIGKINVVFLYRFIAELLQFVEPLTSPQSTQYVQETAQR
AVTEQVESIHSQATRIGLQVAISAPLVIIPRHSRSVDMLIVDLGHLDLQNEFDVLPTSLN
DENREAVFDIMELSLQSLQLARGVMDISSSPMIKRNLIEPIKLEANIKRSLLPSCNEIPI
IDCSAALDFVEMNLGRQDYHVLTTLFQVNLEEAESVVLEDQSRLDQSMAKEQEEHSEPSE
TANTSSEPDVPVENAETVWDRMVFSFDLVGASLTLYNNEKPLDPFDSQSSVCDPATRLCL
CHVEESVVTVVLPSDSSVQINCALNGCVVEDARKGSISAFPRLVDKKMATLTGSRTSSSS
KEMCDVVFCQLPSGEMKVQVSLQNATIFVNFPFLLLLLEFFTIPPSDVDQPPQPQVSVVS
QTSLDAPNVRDPEAPRKERVVQIHKTESRDVTSTPTLSQVDAAASPTQETQLMVFVHGVV
KDPNIVLLSDATNKESEALIVQAEVEFDYTLEGVKQSLSADLTNLQMQAAQFPEVKRTSY
KVLNPCSLSFKYLTPASSEGGQDIAIALEEMVFEFSPGLLTTVSNVVTALTGQQKVDESV
QTVGGEVVGAPADLWESKPASAEYWFKKKAIEDAKPKLVTRNATGDKLSLTIKEVQVVLV
NEVEGAHIPLLLIRSCATGKVFDWSAQLKVEADVAAQVCYYNECLAVWEPLLEPVMVEDE
NTMWQVQLKLFLAEGYVSSFSPKDSESCDLPSRDVTDTPQTGDRTDCGLGSLAQKRSSFR
KKRRLSSGRRTWPKRKQKRRPRITGPASDDEGDLNFNWALTTFIQSTQMAIMDPSMEVKS
DSAIDEVDAPQDGVEAPSDNHEKPTQALYMVINSHDVMQLTVTSAAVRVLSELNELWTID
RAKKLRTVPLATFVIHNELGIHAAVTVSHRLQVSDTEQLTVRQRIPKLPAAGNVGLADVA
VDPASRTQRHARSDFIRNISEPVLNHLREKLHKIRKKRASSDPVSLDFIRRRNLSLQNTV
SFQIGQEDVKKKLLRKGRSLDLTTRQTDGNTLTQQEEETRSALPRFEEREVEDIYLVRVV
SYSKLYMRMYCLYTDLFLLSPFTDFFLVEGRSSCFSGTVSSRDSSESSSTTFTVFNSLSS
MTSLKHGSQYATELPAFQPMTVSSSSKMEQGMQKYSLHFKQVNGFYHLNLISVCRSGSFL
HELSPRDAPFREAKHKWYVVVQVDIKRGRKTVTIRSPLQIQNHLQVPVDVFVKRRDSSGS
CEEHHFKLFSVESGGVQNVPLHTAYNEELFFKPGGTDFHISSSSISWRKFSTGEPSHVLS
CSSTITSESSSTFFIKALCLSDSLNKLPTGEDSPHHVIHLYPPLIVQNKLPFELVISTEE
GGGDDKVLSAGDKVTLVNVCPGYDCKITVTLKDYKEATWMGDIFVKKQRYKSCQLLMRSQ
EDVSKELSLGVKSMPQQGTRELFIYSPYWLINKTGLHVEYRVSRCKQVYNQSAIEQHPLL
FNFTEKTYRKARLRLPGHPWSNKFSLDAVGDSGKVTCKGSESKKFQFILQIEMSRTGLTK
VVTLTPKYVIINSTEISYSFIENKCKKALWFVVEPGESKPFWPSDKSSSIMLKPTMSKVI
SKPFSFDSSHTTVLRIPDWQALTVDVHGEVEDAVTTVVVSPYSPGIATVRIENLCDDIPI
RFHQKGCGQVTVLDSKQMILYTWDDPLGVRKLLWKPFKGMDKPIEAQVDEDNFGEIRMEL
DEISPPVKDDRRQLEDRDSTCGLLCGSSSAVPEEIDQEWDTVDGAVVHRVKKTIYWVSVT
DGLQRVLIFADDENLSCLARKCCDSEVVTMDIFMSLDGVGLSLVNSKPDEVAYITLSSSS
SVWQVEGTSGRWKTLNLELSTWLEDAWRNNAVEVVLEDREVNFNTMTMTRPYNGALQRLF
EPALWLNYTRSDRYHSLHCRMHRIQIDNQQFSTVFPVALYPSPLPSAIIHRTGFKPFIEV
SVIYHQVPKEGMHHIKYAKALVQEMNVRIDKGFIISMASLFSQQKELLEEENYFEEDMKR
CAMPLRETKAVKAALETQKVFLEYFHLSPLKINLSFSLASSSDEDDENQAFARDLLDFFV
DSIGATLTEINDAELKMAYFERVSAFLTQENLVAQITRHYTMQGVRQVYVLVLGLDVLGN
PYALIHGIGEGVRDLFYEPYQGIIAGPGEFAEGVARGVKSLLGHVIGGTAGAFSRITGSL
GQAVATLTFDSNFQMQRRLRMHRQPQGVGQGLLMGGKSLLMGLFFGVSGVVVKPVKGARS
EGVEGFFKGIGKGLLGLLTRPTGGVIDMVSFTLDGVRRSAEQNGEDIACRMRLPRFTASN
MPLKPFSEHDAQGNGILQSLHQFDDDVYVDHMSIAEEDDSVVVLLTNRRILNLHQSKFWH
NWKVRWSCLYEDVAGFPLLTENALVIKEESSKQDHTTSFLSAPTHDIVSSNRVELETLKT
KIDSNIRHLR
NT seq
8493 nt
NT seq
+upstream
nt +downstream
nt
atggatgtacgattcagttcatttcaagtctcaggcttttctcaagtggagaaacatctc
aatgagcatttgatagaaccagttgagttgaatgtcattgtaaagagaagactggagctg
gatgtcagcgatctccctttgattgaagtagaggggagtttggagctgtttaagatgaat
ctgggagtgaatgattttcagatgtttatgatggttttgaacgataacttgttggaaggc
caaaacgaacgtacacctgcaactaaaactgatggcgcggataaagaggagaaaaagcaa
cagaatctctcagacagcactgatgctaagtctatagatgaagtatcaaatattaaatgt
cattttacgctgagtaagcttcaagttacttcgcccaaagttgttgatggtgtctgtaag
ccttatttggttcttgaaacaaataacatgagtgccactgtcaccatggaaacatggatc
cttaatgcatctgcaaagcttggagctattgagctcgtcgatcatttgaacaaaggtgca
gatggtttgccagtaaaagttttgtcttcttcgcaggatacagatcttatttctgtttct
tacaaaagagttgatcccagatgtccagaattcgaatcgacattctgcactatagagcag
caaataaatgtcagtttttcaaagctgaaaatagattgtcttcaaaagggactgatggat
ttgcaaatgcatggccttgctcttttgtcaagtttcggagactcctcaagcgctttaagt
tcagacagtgcgagtaacgctgattcagagcagataaaacaaagtaccgtgagccttaag
gtgaatgctgaactgtcagaagttgatgttcttgtcaggatctcccataaaaatctggcc
agtatcaaggttgaaggtttaacagcagaatttcttctgtgggatggcggaatggtttta
aagtccaggcagaatgatctctctgtgatcgacctgaatagccaaacctattatcctaag
attatctctgtggaaaatgaaaatgtctttgatttcgagtttaagtatttcgacaaagca
aatcttcccaagagtgatccaagtcctgctgacctaacccgactggatgggaaccttgag
ctaaacatcgggaaaataaacgttgtctttttgtaccgattcatagcggaattgttgcaa
ttcgtcgagcctttaacaagccctcagtcaactcaatatgtacaagaaacagcacaaagg
gcagttactgaacaggtggaatcaatccatagtcaagcaactcgcattggcttgcaagtg
gccatcagtgcccctctggtgataattccacgtcactcgcgctcagtggatatgctcatt
gttgatctgggacatttggaccttcagaacgaatttgatgttctccccacatcactgaac
gatgagaacagagaggctgtgttcgatatcatggaactatctcttcaatcgctacagcta
gcgagaggtgtgatggatataagttcctctccgatgatcaagcgaaatctcattgaacca
ataaaactagaagcgaacatcaagcgttcactattgccctcttgcaatgaaatcccaatc
atagattgctcagctgctctggactttgtcgagatgaatctaggtcgacaggattaccac
gttctcaccacgctttttcaagtaaatttggaagaagctgaaagtgtggtactggaagac
caatcgagacttgaccaaagcatggcaaaggaacaagaggaacatagtgaaccgtctgag
acagcaaatacttcatctgaacctgatgtacccgtggaaaatgcggaaactgtgtgggac
aggatggtgttttcatttgatctcgttggagctagtcttactctgtacaacaatgagaag
cctttggacccgtttgattcacagtcgtcggtctgcgatccagccacaaggctctgttta
tgtcatgtggaggaaagtgtagttaccgtagtcttgcccagtgacagctcagttcaaatt
aactgtgcacttaatggctgtgtggttgaagatgctagaaaaggatcaatttctgctttt
cccaggttagtagacaaaaagatggcaacactcactggatctcggacatcttcatcttcc
aaagaaatgtgtgatgtagttttctgtcagttaccttcaggggagatgaaagtccaagtg
tccttgcaaaatgctaccatttttgtcaactttccctttttgctccttttactggagttt
ttcaccattccaccatccgacgtggatcaacctccacagccacaagtctcagtagtcagt
caaacatctctggatgctccaaatgtcagggaccccgaagctcccaggaaggagagggtt
gtacagatacacaagactgaaagtagagatgtcacttctactcctactcttagtcaagtg
gatgctgcagcttcgcctactcaagagacgcagctgatggtttttgttcatggtgttgta
aaggatccaaatattgtcttactttctgacgccactaacaaagagagcgaggcactcatt
gttcaggcagaagtggagtttgattacactttggaaggtgtaaagcagagtctttcagca
gatttgacaaatctccagatgcaagctgcacaatttcctgaagtaaaaaggacatcttat
aaggttttgaacccttgttcgttgtcattcaagtacttgacaccagcttcgagtgagggt
ggtcaagacatcgctattgcattagaagaaatggtgttcgaattctctccaggactcctc
accactgtcagtaatgtagttacagcattaacaggacagcaaaaggtcgatgaaagcgtt
cagacagtgggtggagaggttgttggcgccccagctgacttgtgggaaagcaaaccagct
tctgctgagtactggtttaagaaaaaagctattgaagacgccaagcccaagctggtgaca
aggaatgcgactggcgataagctcagcttaacaattaaagaagttcaagtggtgttggtg
aatgaggtcgaaggtgcccatattcccttgctgttgattcgctcatgcgcgacaggcaaa
gtgtttgattggtctgcccagcttaaagttgaagcagatgttgcagcacaggtttgttac
tacaatgagtgtcttgccgtttgggagcccctgttagagccagtgatggtcgaagacgag
aataccatgtggcaagtacaacttaagttgttccttgccgaaggatacgtttcaagtttc
tccccaaaagactctgaatcgtgcgatcttccttcgcgagatgtcacagatacacctcaa
actggagataggacggactgtggtctaggctctttggctcaaaagagatcttcattcaga
aagaaacggcgtttgtcttcaggacggcgaacatggccaaaaaggaaacaaaagcgtcgc
cctcgtataaccggcccagcatctgacgatgaaggggatcttaatttcaactgggccttg
actacgttcatccagtccacccagatggcaatcatggatccatccatggaggtgaagagc
gacagtgccatagatgaggttgatgctccgcaggatggagtcgaggctccttccgataac
catgagaaaccaacgcaagcattgtatatggtcatcaattcgcatgatgttatgcaactg
accgttacttccgcagctgtacgagttctctccgaactgaacgagctgtggacgattgat
agagcgaaaaaactgagaacagttcctctggcaaccttcgtcatccataacgagctggga
attcacgcggcagtgacagtgagccacagacttcaggtctcagatacggaacagctgacg
gtgcgtcagagaattccaaaactgccagccgcagggaatgttggtcttgcagatgtcgca
gtagacccagccagtaggacacaacgacatgcacgtagtgattttatccgtaatatatct
gagccagtacttaatcacctaagagagaaacttcacaaaatacgaaagaaaagagcttca
tctgatccggtgtccctcgattttatcaggcgacgtaacttatcccttcagaatacagtt
tctttccaaattggccaagaagatgttaagaaaaaacttctcaggaagggtcgttctctt
gatttaaccacaaggcagacggacggaaacactcttacccaacaagaggaggaaacgaga
agtgccctgccacgctttgaagaacgtgaagtggaagacatatacttagtaagggttgtt
tcatattcgaaactatacatgaggatgtattgtttgtacactgaccttttccttttatct
ccattcaccgatttttttttagtggaaggtcgttcttcttgcttctcaggaactgtatct
tcgcgggattcatcagaatcgtcatctacaacattcacggtctttaattcgctctcttcc
atgacttctttgaagcatggctcgcaatatgccactgaactccccgctttccaaccaatg
acagtttcatcgtcctcaaagatggagcagggcatgcagaaatattccttgcacttcaaa
caagtgaatgggttttaccatctgaatctcatctccgtttgtcgctctggatcgttcctg
cacgagctttctccaagagatgcaccatttcgtgaggcaaaacacaagtggtatgtcgtt
gttcaagtagatataaaacgcggtcgtaaaacagttaccattaggtcaccattgcagatc
caaaaccaccttcaagtcccagtggacgtgttcgtcaagcgacgagattcatcggggtca
tgcgaggaacatcatttcaagctcttcagtgtggaatcgggtggtgtgcagaatgtccct
ttacatacagcatacaacgaagagcttttctttaaacctggtggtactgattttcatata
tcatcttcctcgatatcctggagaaagttttctacaggagagccgtctcatgtgttgtct
tgttcgtcaacgatcacttcagagtcttcctccacttttttcatcaaggccctttgttta
tcagacagcttgaacaaactgccaactggtgaggactctccccatcacgtgatccatttg
taccctcccttaatagtgcaaaataaacttccatttgagctagtcatatcaacagaggag
ggaggtggagacgataaagtactcagtgccggtgacaaagtaactcttgtcaatgtgtgt
cctggatatgactgcaaaataactgttacgcttaaagattacaaagaagctacttggatg
ggagatatctttgtgaagaaacaacggtacaaatcctgtcaattgctaatgcgttcacag
gaagacgtctccaaagaattgtcgcttggagtgaaatcgatgccccaacaagggacaagg
gagctgttcatctattccccctactggcttattaacaagactggactccatgtggagtac
agggtctcgagatgtaaacaagtttataatcagtctgctatagaacaacatccacttctt
tttaactttactgaaaaaacctacagaaaggctaggctcagactgcctggacatccctgg
tccaacaagttttctctggacgctgttggagattctggaaaggtaacatgcaaaggaagc
gagtccaaaaagtttcagtttatcctacaaattgaaatgtccaggacagggctgacaaag
gttgtaacgctaaccccgaaatacgtcatcattaacagcacggagatttcgtactctttt
atcgaaaataaatgtaaaaaggctttgtggtttgttgtggagcctggagaaagcaaacca
ttttggcccagtgacaagtccagttcaatcatgttgaagccaacaatgtcaaaggtcatt
tcgaagcctttcagtttcgactcctcgcacacgacagttcttcggattccggattggcag
gctctcactgttgacgttcatggggaggtcgaagatgccgtgacaactgtagtggtgtca
ccttactcgcctggaattgcaacagtcaggattgagaacctgtgtgacgatattccgatc
cggtttcatcaaaaaggctgtgggcaggtgacggtgcttgactctaagcagatgatcctt
tatacttgggatgatccattaggtgtgcgaaaactgctctggaaaccgttcaagggaatg
gataagccaatcgaggctcaagttgatgaggataacttcggcgaaattcgaatggaactc
gatgaaatctctccaccagtcaaagatgaccggcgtcagctggaagacagagacagcaca
tgtggattgctatgcggctcgtcaagcgctgtacctgaagaaatcgatcaggagtgggat
actgtggatggggcggtggttcacagggtcaagaagactatctactgggtgtctgtgacg
gacggactgcaaagggtgctgatatttgctgatgatgaaaatctttcatgtctggctcgg
aagtgttgtgactctgaagttgttaccatggatattttcatgtcattggatggtgtcggt
ttgtcgctggtcaacagcaaacctgacgaagtggcatacataactttatctagttcatcc
tcagtctggcaggtggaggggacatctggaagatggaagaccctgaatctggagttgtcc
acttggttagaggatgcctggaggaataacgccgtggaagtcgtcttggaagacagggag
gtgaactttaatacaatgactatgactcgcccatataacggggcccttcagagattgttt
gaacctgctctgtggttaaattacacccgatcagatcgctaccacagtctacactgcaga
atgcaccgaattcagattgataatcagcagttcagtacggtttttccagttgctctttat
ccatcaccgttaccttccgccatcattcataggacaggattcaaacctttcattgaagtg
tcagtgatttatcatcaagtcccaaaagaaggaatgcatcacataaaatacgccaaagca
ttggtacaggagatgaatgtgagaattgataaagggttcattatttcgatggcaagcctt
ttcagtcaacagaaagaacttctagaagaggaaaattatttcgaagaagacatgaaacga
tgtgctatgcctctgcgggaaacgaaagcagtaaaagccgcattggagacgcaaaaagtt
ttcctcgaatacttccatttgtcgcctctcaagatcaatctcagtttttcactggcatct
tcctctgatgaggacgatgagaatcaagcttttgctcgagacttgttggatttctttgtt
gactccattggggcgacactcacagaaattaatgatgctgaactgaaaatggcttatttc
gagcgagtcagtgcatttttgacccaagagaatcttgttgctcagatcacgcggcattac
accatgcagggtgttcgccaagtttatgttcttgtattgggccttgatgtgcttggcaac
ccttacgcactgattcacgggattggcgagggagttagggacttgttttatgagccctat
cagggtatcattgcagggccaggagagtttgctgaaggtgtagctcgtggtgtcaagagc
ttgctgggtcacgtgataggcggaaccgctggagcgttttcgcggataacgggttcatta
ggtcaggctgtggccacgcttacgtttgactcaaattttcagatgcaaagacgtctgcgc
atgcacagacaacctcaaggtgttggtcagggactgttaatgggaggaaagagtctgttg
atgggtcttttctttggagtgtccggtgtagttgtaaaacccgtaaagggtgcccgttcg
gagggtgtagaaggatttttcaaaggaattggaaaaggcctccttggattgcttactcgt
ccaactggaggggtgatcgacatggtcagctttactcttgatggagtgagaagatcagct
gaacagaatggcgaagatatcgcctgcaggatgagacttcctcgcttcacagcctctaat
atgcctttaaagcctttctcagagcacgacgcccaaggaaatggaatcttacagagttta
catcaatttgacgacgatgtttatgtggaccacatgagcattgctgaggaggacgatagt
gttgtggtcctcttaacaaacaggaggatattgaatttgcaccaaagcaagttttggcat
aattggaaagtgagatggagttgtttatacgaggacgttgctggtttccctttgcttacc
gaaaacgcattagttatcaaagaagaatcttctaagcaggatcatacaaccagtttcctc
tcagcccctacacacgatattgtgtcttcaaacagggtggaactagagactctaaaaacc
aagatagacagcaacattcgtcacctacgctga
DBGET
integrated database retrieval system
