Stylophora pistillata (Smooth Cauliflower Coral): 111322954
Help
Entry
111322954 CDS
T05774
Name
(RefSeq) E3 ubiquitin-protein ligase parkin-like isoform X1
KO
K04556
parkin [EC:
2.3.2.31
]
Organism
spis
Stylophora pistillata (Smooth Cauliflower Coral)
Pathway
spis04120
Ubiquitin mediated proteolysis
spis04137
Mitophagy - animal
spis04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
spis00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
111322954
04120 Ubiquitin mediated proteolysis
111322954
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
111322954
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
spis04131
]
111322954
04121 Ubiquitin system [BR:
spis04121
]
111322954
03029 Mitochondrial biogenesis [BR:
spis03029
]
111322954
Enzymes [BR:
spis01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
111322954
Membrane trafficking [BR:
spis04131
]
Autophagy
Mitophagy
PINK1-Parkin associated proteins
111322954
Aggrephagy
Other aggrephagy associated proteins
111322954
Xenophagy
Other xenophagy associated proteins
111322954
Ubiquitin system [BR:
spis04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
111322954
Mitochondrial biogenesis [BR:
spis03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-dependent mechanism factors
111322954
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_14
zf-RING_12
ubiquitin
IBR
Rad60-SLD
Dsc3_N
OTU1_UBXL
Ubiquitin_5
Motif
Other DBs
NCBI-GeneID:
111322954
NCBI-ProteinID:
XP_022781932
EnsemblRapid:
LOC111322954
LinkDB
All DBs
Position
Unknown
AA seq
461 aa
AA seq
DB search
MTISWLKFPTDWHIDNRMATARRRERFTIFVRFNSNTNIPVTIDLQWTVLRLKQEIATSQ
GVEASELRIIFAGRELKDDLQLKDAEIPHQSVIHAIRGGRWSARPSRPGKIMPLAKVKLS
TVGEDEERAATSTDGAPSQRQTQYFVYCKTCKEVTPGKLRVCCSLCKEGAIVLQQDPSSW
EDVMRSGRIRGSCKKSGCEGSIAEFYFKCAQHTAAEGDRCVALTLIRSNTRDIPCLACAD
NRDPVLVFPCADGHAVCLECFAIYSTTKLNDRQFVHSETYGYTLPCPGSSGSCDSALIPE
AHHFRVLQDDQYDRYQRFGTEEYVLKMGGVLCPGRGCGMGLLPEPNMRRIKCEHCQFEFC
RECKEPFQRGHSCNQSNPNATTNARASNYQVNLENARRARWEAEARQVIEQISKKCPGCK
TNTEKNGGCNHMTCSRCRFEWCWICLIRWNPDCQGSHWFRT
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atgactatttcctggttgaagtttcctacagattggcatattgacaatagaatggcaaca
gcaaggagacgagagaggttcactatctttgtgcgatttaactccaacaccaacatacca
gtcactattgacctacaatggacagtgttgaggcttaaacaagagatagctaccagtcaa
ggagttgaagcttcagagttgcgaataatttttgcagggcgagaactgaaagatgatctt
caactgaaggatgcagagattcctcaccaaagtgttattcatgctatccgaggtggccgc
tggtcggcgagacctagtagacctggcaaaataatgccattggccaaagttaaactttcc
actgtgggtgaagatgaagagagagcagcgacttcaacagatggagcaccttcccagcgg
cagacccagtattttgtctactgcaagacttgtaaagaggttactccaggaaagttgagg
gtttgttgctctctgtgcaaagaaggggcaattgttcttcagcaggatccaagtagttgg
gaagatgttatgagatcaggaagaatcagaggatcgtgtaaaaaatcaggctgtgaaggg
agtatagcggagttttactttaagtgtgcacaacatactgctgccgagggagacagatgt
gtagcactaactttgattcggtcaaacaccagagacattccttgtttggcctgtgctgat
aacagggatcctgttttggttttcccttgcgccgatggacacgctgtatgtttggagtgc
tttgcaatctactctacaacaaaactgaatgacaggcagtttgtacatagcgagacctac
ggctataccctgccgtgcccgggaagttcaggcagctgtgacagcgcgcttattccggag
gctcatcatttccgggtgctccaagatgatcagtatgaccgctaccagaggttcggaacg
gaggagtatgttttgaaaatgggtggcgtgctatgtcctgggcgtggctgcggaatgggc
cttttgcctgaaccaaacatgcgccgtatcaagtgtgagcattgccagtttgagttctgt
agagagtgcaaggagccttttcagcgaggtcactcgtgcaatcagagtaacccaaacgca
acaacaaatgctagggctagcaattaccaagtcaatttagaaaacgccagacgagcacgc
tgggaagctgaagcgcgacaagtgattgagcagatcagcaagaagtgtcccggatgtaag
acaaacactgagaaaaatggtggatgtaaccacatgacttgttctcgctgtcgctttgaa
tggtgctggatttgtttaattcgttggaatcccgattgtcagggttctcactggtttagg
acgtga
DBGET
integrated database retrieval system
