Stylophora pistillata (Smooth Cauliflower Coral): 111323283
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Entry
111323283 CDS
T05774
Name
(RefSeq) CCR4-NOT transcription complex subunit 3-like isoform X1
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
spis
Stylophora pistillata (Smooth Cauliflower Coral)
Pathway
spis03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
spis00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
111323283
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spis03019
]
111323283
Messenger RNA biogenesis [BR:
spis03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
111323283
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
111323283
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
Exc
HTH_63
Motif
Other DBs
NCBI-GeneID:
111323283
NCBI-ProteinID:
XP_022782333
LinkDB
All DBs
Position
Unknown
AA seq
830 aa
AA seq
DB search
MADKRKLQGEIDRCLKKVQEGVETFEDIWKKVHSASNANQKEKYEADLKKEIKKLQRLRD
QIKTWMASNDIKDKRTLQENRKLIETQMERFKVVERETKTKAYSKEGLGLAAKIDPATKE
REEASIWITEVLERLQIEVDQIESEIEQVYAGSRKKKLDRDRQDKVDELQEWAGRHRHHN
QQWETILRMLDNCTIQPDDIKKLQEDMDYYLDCYKEPDFQENEFMYDDFDLEENIAALNT
LATSPTEDDDLIVNHNHVPMSPSSTVPPSSPGTPGTPSIPTTPTTTTGPNSGTGTKINLS
SPRKNSKNESLQANSLPNNSPPRTSAFKMNNSSQPAVTQTSSATAPGPTIIKASNTPAKV
VNSTIHTNAVENHEASNGEEPVQKSSQPNTPPPPVSGYAVAAGAQQNHVECAPTSPVVSV
VPTRPVNHISSASTTVANSLSWTSSVPGNATDLSTHTNHFPESESAASSMADFVSSIASL
SITTPPTISTAVPPPQSNSLPPASSTSLSSVLGMKPATTATQVPIQSVSTSLTSSLPPSS
VPVSAQASDPGGFNLSMTTPLSSNSGPVIPSSTMSKGGEPLVSSANPPASILSGSHLMSN
SGPTQQPSTSNSFSSLKSMAAQAVATAGLNNSISTPTTDYSTESRGLFDTSNSQTTDKTK
ALQETNTAHLQPLLGVAPLGPVPLNKERCYQLAMVEAAYHHQPQPADSEKVRPYLQRSPY
PTPAHHHQHPPQHVDSIEFFQRLSTETLFFIFYYQEGTRAQYLAAKALKKQSWRFHTKYM
MWFQRHEEPKAITDEYEQGTYIYFDYEKWGQRKKEGFTFEYRYLEDKELP
NT seq
2493 nt
NT seq
+upstream
nt +downstream
nt
atggcggataaacggaagctacaaggtgaaattgaccgttgccttaagaaagtacaagaa
ggcgtagaaacatttgaggatatctggaaaaaggttcacagtgcgtcaaacgcgaatcaa
aaagaaaaatatgaagcagatctcaagaaggaaattaagaaactacagcgtttgcgagac
cagattaagacctggatggcgtcaaatgatatcaaagacaagagaactcttcaggaaaac
agaaaacttatcgagacgcaaatggaaagattcaaggttgttgagagagagactaaaacc
aaggcctattctaaagaaggacttggacttgctgcaaagatagacccagcaaccaaagag
agagaggaggccagtatttggattacggaagtcctagaaaggctacaaatagaggtggac
caaattgagtcagaaattgaacaagtgtatgcaggatcacgcaagaagaaacttgacaga
gatagacaagataaggtggacgagttgcaagaatgggcaggtcgacatcggcaccacaac
caacaatgggagacaatccttagaatgttggacaactgtacaatacaaccagatgatatt
aagaagttacaagaagacatggattattatctagactgctataaggaacctgacttccaa
gaaaatgaattcatgtatgatgactttgaccttgaagaaaacattgctgccttaaacact
ctggcaacttcccccactgaagatgatgacttgattgtcaatcacaatcatgttccaatg
tctccaagctctacagtgcctccaagctctcctggcaccccaggcaccccaagcatccca
actacccctacaactacaactggaccaaactctggtacagggaccaagataaatctgagc
tcaccaaggaaaaactcaaagaatgaatctttgcaagcaaatagtttgccaaacaactca
ccccctcggacatcagccttcaagatgaacaattcaagtcagcctgcagttacacagaca
tcatcggcaaccgcaccaggtccaacaattataaaagccagtaatacaccggcaaaagtt
gtgaattcaacaatccacacaaatgcagttgaaaatcatgaggccagtaatggagaagag
cctgttcaaaagtcatcacaacctaacacacctcctccacctgtgtcaggatatgctgtg
gctgcaggtgcacaacagaaccatgttgaatgtgcccctacatcaccagttgtgtcagtg
gtaccaacaagaccagtgaatcatatttcatctgcatcaacaacagtagcaaatagttta
tcatggaccagttcagtgcctggaaatgccactgacctctctacacatactaaccacttt
cctgaatcagaaagtgctgcatcaagtatggctgattttgtgtcatccattgcttccttg
tccatcaccactccccctacgatatcaacggcagtaccacctccacaatccaactcctta
cccccagcatcatcaactagtcttagttctgtcctggggatgaagcctgcaacaactgca
acacaggtccccatacaatcagtatctacaagcctgacttcgtctcttccaccaagttca
gtaccagtttcagctcaagcgtcagatccaggcgggtttaacttgtcaatgactacaccc
ctttcatcaaattctggcccagtcataccaagttccacaatgtcaaagggaggtgaaccc
ttagtatcatctgctaatccaccagcatcaattttaagtggttctcacctgatgtcaaac
tctggaccaactcagcagccctcaacatctaattcattctcatcactgaagtccatggct
gctcaagcagtggctacagctggattgaacaattccatctcaacaccaacaacggactac
agcacagaaagtagaggtctgtttgacacaagtaatagtcaaacaacagataaaaccaaa
gccttgcaagagacaaacacagctcatctccaaccattactgggtgtggctccattaggt
cccgtgcccctaaacaaggagaggtgttatcagctggccatggtggaagctgcatatcat
catcaaccacaaccggctgactcagagaaagtcagaccttatttacagcgcagcccttac
ccaacaccggcgcatcatcaccaacatcccccacaacacgtagactcaatagaattcttc
caaagattgtccacggagacgcttttctttattttttattaccaagagggaacgagagca
cagtacttagcggcaaaggctttgaagaagcagtcgtggagattccacaccaagtacatg
atgtggtttcagagacacgaagaacccaaggctatcacggatgaatacgaacaaggcacc
tacatctatttcgactacgaaaaatggggtcaaaggaaaaaagaaggctttacttttgag
tatagatatttggaagacaaggaactcccctag
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