Stylophora pistillata (Smooth Cauliflower Coral): 111324587
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Entry
111324587 CDS
T05774
Name
(RefSeq) focadhesin-like isoform X1
KO
K27498
focadhesin
Organism
spis
Stylophora pistillata (Smooth Cauliflower Coral)
Brite
KEGG Orthology (KO) [BR:
spis00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spis03019
]
111324587
Messenger RNA biogenesis [BR:
spis03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
111324587
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Focadhesin
DUF3730
INTS1_R4
Motif
Other DBs
NCBI-GeneID:
111324587
NCBI-ProteinID:
XP_022783923
LinkDB
All DBs
Position
Unknown
AA seq
1824 aa
AA seq
DB search
MADEDRKRLSSKTSSYQSQEVWKLYDCILIKKPPGSVLNANSVEIPELKLLWELTGDSSE
ILSRLCCNCLVELVVDNHAELEYILRGVLSVAPSARNLVGITKALSCLLTFQVYKCTTAG
MDYFCPFSLRASPHPFITLLISRPEGATILIQEVNVLLVNSVKRYLNCDPQFILRMLESF
FKFVLLDPNVTVNWFTRQQFLTTLLQTASVILQCTEKNHNHEEVAERKKLVEDIVDLLAS
LVPCFQIDGKSLSHTTFLVHSLTYWLLEHSNFFPGGKSHLELMVNHLFSLCCESLSFGSD
MTTSILLLQTFQLHCPQAFLQLYILPTLSKLLLNSAEDCCIHILQLCLSTMQSQLKHFKP
ECLFLPISHLFLVQPILQIITSPPRQTFSTKMQGSTGQSLHSKALQILGFVEHNVLPLIK
QNQTTSKATGNTQHYSSSLSLCIRQMTACAEEMITLIGNTKSTKQWLSNLQNSVASHYRL
LSHVPLMLSALLVTSQGCLAMEVLEVIPILAKADPSQALTFLPLLLYKLSKEVDPEVKQH
ALYTIPQLASHKFCIGPVLHTIQTIGKCPPLKPVYLRLICKLWQLNNRVFPHLQQALNVV
IDSSLGGKLNLEIKIAQAACLLDICKLRPSQHGADLLSLLSKLLDENTRPGETENTPSAL
VVSLALQALEQLCKAEVVDLCTGWKVLSVKLGVDRRPQVLCSICQLFSIVPHLVSNSSAY
LNFKNEALSFLWSLTQHKESPVAHAAFTTLSKFHPSDFKLIHLPSKIHLPLKEKILASKK
LDSNADEEDGDVAVQQNIDNSTPPGNAYVELLQMVKQDVLPGYKKLMTNMISLEVASMPR
GLGHTVLHASSSHERNLQSIPKFLMSHYEKSKSPGLNQGLAAGILFSFEPPFEQHEGKRA
RRYTVDCARTYRQMLDSLLYEVPVQPTEWHRTLLLPQAWLAFMNRSYKACVEGRKAELEM
QHSHGHFQSMEELKTRQSNCWLWVRDQITERLKAASRGNPSVQGNSVLALAGLARAVSIY
VGQQTSSETTEQYQRNNDWLSVVTDTVMVVLDGNYKPKGPTLVWCQQVSSPTSTASSLLA
RSCAALSMSLLVPCLVILDSDRIYDITELLKQRIPGQSKSGSSAVLQMSCSVGLGLFLSK
LYEEHFSDAYGKEGYLLLSTALDVLEETAFSNDLDNTEGACLGVGLAASSLCKEGLIDSR
VHVTNLYHKLVDSVNEQCDDPDQKLQCLSYSVACVCVNAFHTSLLSADQALQCVDTIQKL
SGKYLEVCGISLSLGLLLHGLVSCGHGGAIELAREIGKDWRSVLENKDVSERRQLSAVNG
IVALLGSEQGLFTVDSSTSDVVFPSQSGGSIIKFLQKFVSSPEDVGLSFNTAWLLGHLYS
ALTSSSVSDTSVPINYSYLSERSILRLLFEFLNQSGKIGPHSSFGGGRVAVVLESLVNGP
QVALPPVNWVSVLGPIMRANFGEDTRQLCIRLAVTQAQSSSNLSSFLSSLLSSVMFEGLE
DRCKRELLKNLSRLVYVISSSKMKEFLEEVLRELWRNSMDCTQRKTILEAYLSVLSLKEP
PTSVIGWTITALEHMYNDAFGAEKSESECLRLFTRCFALIPLEDVKRILRNTQATDTNDL
FLRCCMVRDGIAPVKWLAPCFDFILSSGLIGTKYKEFLCSVVPLIIDSCTKMKYDERQHW
FLELIGQFKNAVQLSSETSSHQTVMKSLTLLSLVSAAWCDVPILQGVESPFSTCPPFDAT
YCGSIERFPYLLPLTLSTLLGKEPWRQIAEKVIDWLLSLRGDLRLKTENVHHMLIHDTLI
SLRETEAYRKTALWTEVVAELHPK
NT seq
5475 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgaagatcgaaagcgactgtcgtccaaaacttcttcatatcaatcacaggaa
gtatggaagctttatgactgcatcttgattaagaaaccacctggatctgtcctaaatgcc
aactctgtagagattcctgaactgaagttattatgggagctgactggagattcatcagaa
attttaagcagattgtgttgtaattgcttggtagaactagttgttgataatcatgctgaa
ttggaatacatcttgagaggagtattaagtgttgctccatctgcaagaaatctggtcggt
ataacaaaagccttgagttgtttgctcacctttcaagtttataaatgtactacagctggt
atggattatttctgccctttttccttgagggcctctccccacccatttattacactactg
ataagtcgtcctgaaggtgcaacaatcctgatccaagaagtcaatgtgttacttgtaaac
agtgttaaaagatatctcaactgtgatcctcaatttattcttcggatgctggaatcattt
ttcaagtttgttcttttggatccaaatgtcacggttaattggtttactaggcagcaattt
ttaacaactctcttgcaaacagccagtgttatactgcagtgtacagaaaaaaatcacaat
catgaggaagttgctgaaagaaaaaagcttgttgaggatattgttgatttattggcatct
cttgttccctgcttccagattgatggcaaatctctcagtcatacaacttttcttgttcac
agtctgacatactggttactagaacatagcaattttttccctggtggtaagagccatttg
gagctgatggtgaatcatttgttttctttgtgttgtgagagtctgtcttttgggtctgat
atgacaacatccatcctcttattacaaacatttcaactgcattgcccacaggccttcttg
caattatatatcttaccaaccttgagcaagcttcttctgaattcagcagaagactgctgc
attcatattctccagctctgtttgtcaacaatgcaaagtcaattaaaacatttcaagcca
gagtgtctgtttcttcctatcagtcatctgtttcttgtgcaaccaatacttcaaattata
acatccccacccaggcagacattcagcacaaagatgcagggcagcactgggcagtcttta
cacagtaaagctctccagatcctaggatttgtggaacacaatgttcttccccttataaag
caaaaccaaactaccagtaaggctactggaaatactcagcactattcttcatctctcagt
ttatgtatcagacaaatgacagcctgtgctgaagaaatgatcaccttaattggaaacacc
aaatctacaaagcaatggctgagcaatttacagaactcagtagcctcacactatcgcctg
ctgagtcatgttcctttaatgttgtctgcactgttggtgacttcacaaggatgtcttgct
atggaggtcttggaagtcattccaattcttgctaaggcagatccatcccaggctcttacc
ttcctgccattactactctacaaacttagtaaagaagtcgatcctgaagtgaaacagcat
gctctgtacacaataccacaacttgcttctcataagttttgtataggccccgtgttacat
acgattcagacgataggaaagtgccctcctcttaaacctgtgtatctgagactgatttgc
aagttgtggcagttaaataaccgagtgttcccgcaccttcagcaagcactgaatgtagta
attgactccagtttgggaggtaaattgaacttggagattaagattgctcaagcagcttgt
ttattggacatctgcaagcttagaccctctcagcacggtgcagatctactcagtttgctg
tccaaattgctggatgagaatacaagaccaggcgagactgaaaacactccctctgcgtta
gtggtatcactagcactgcaagccctggagcagctttgtaaagctgaggttgtggatctg
tgcaccgggtggaaagttctttctgtgaagcttggcgtggacagacgtccccaagttctg
tgcagtatatgtcagttgttcagcatcgtcccccacctggtctctaactcttcagcttat
ctgaattttaagaatgaagcactttcctttctttggtcgctaacgcaacataaggagtca
cctgtcgctcatgctgctttcacgactttgtcgaaatttcatccatcagatttcaagctc
attcatcttccttcaaagatccaccttccactgaaagaaaaaattctggcgtctaagaaa
cttgatagcaacgcggacgaagaagatggtgatgtcgctgttcaacaaaacattgataac
tcaacacccccagggaatgcttatgttgagcttctacagatggtcaaacaagatgtactc
ccaggctataagaagttaatgacaaacatgatcagcttggaagttgcatctatgccacgg
ggcctgggtcacactgttttacatgcttcgtcgtcacacgagaggaatttgcaatccata
ccaaaatttttgatgtcacactatgagaagtcgaaatcacctggattaaaccaaggactt
gcagctggaatactgtttagtttcgaacctcccttcgaacaacacgaaggaaaacgtgcc
agaagatacacggttgattgtgcccgtacatacagacagatgttagattcattactttac
gaagtcccagtgcagccaactgaatggcacagaacattactactgcctcaggcatggtta
gcctttatgaatcgctcctacaaggcttgtgtggagggtcgtaaggctgagcttgagatg
cagcatagccatggtcattttcagagtatggaagaactaaaaacaagacagtccaattgc
tggctttgggtaagagatcagatcactgaacgacttaaagcggcgtcaagaggtaacccg
tctgtgcaaggtaactcagtgcttgctttagcagggcttgcacgggctgtgtcgatatat
gtaggtcagcagacttcttcagagaccacagaacaatatcagcggaacaacgattggctg
agcgtggtgactgacacagtaatggtggtgttggatggtaattataaaccgaagggtcct
actctggtttggtgtcaacaggtgtcttcacccacctccactgccagttcgttgttagct
cgctcgtgtgctgcgctgtccatgtcacttttggttccttgtcttgtcatacttgactct
gatagaatttacgacatcactgagctgctgaagcaaaggattccaggacaatccaaatcc
ggtagctcagctgttttacagatgtcttgttctgtgggacttggtctgttcctcagcaaa
ctctatgaagaacatttcagcgacgcttacggtaaagagggctatttactgttgtctaca
gctttagatgttttggaggagactgctttttcaaatgacctggataacacggaaggcgcg
tgtctcggtgttggactcgctgcatcctctttgtgtaaggaaggtcttattgactccagg
gttcacgtcacaaatctttatcacaaacttgttgacagtgtgaacgagcagtgcgatgac
cctgatcaaaaacttcagtgcctatcttatagtgtagcgtgtgtctgtgtaaacgcgttc
cacacgagcctgttgtctgctgatcaagctttgcagtgcgtcgacacaattcaaaagttg
tcaggcaaataccttgaggtttgcggtatttctttatcgctcgggttgcttcttcatgga
cttgtgtcatgtggtcatggtggagccattgagttggccagagaaattggcaaggactgg
cgaagtgttcttgaaaataaggatgtttctgagcgacggcaactgtcggctgtgaacgga
atcgtagcactacttgggtctgagcaggggttgtttaccgtggattcttctacttctgac
gtcgtatttccttctcaaagtgggggaagcatcattaaatttctccaaaagtttgtctca
tcgccagaagatgttggtcttagttttaatactgcctggcttcttggtcatctgtacagt
gcactcacttctagctcagtcagtgatacaagtgttccaataaactacagctacttgtca
gagaggagtattttgcgactgctctttgaatttcttaaccagtctgggaagataggtcct
cattcgagtttcggtggaggaagggtggctgtagtcttagaatcattggtcaacggtcct
caagtcgcactaccgccagtgaattgggtgtcagtacttggaccaatcatgagggctaat
tttggggaggatacaaggcagttgtgtattcggcttgcagtgacccaagcccagtcctcc
tccaatttgtcctcgttcttgtcgtctctgcttagtagtgtgatgtttgagggcctggag
gatcggtgcaaaagagagctgctgaaaaatttgtcaagactggtttatgtcatttcctct
tccaagatgaaagagttccttgaggaagtgttaagagagttatggagaaatagcatggac
tgtacccagaggaagaccattttagaagcttacctttcagttcttagtttaaaagaacct
cccacttctgtgatcggatggaccataacagccctggagcacatgtataatgatgcgttt
ggtgcagagaagagtgagagtgaatgcttgaggttgtttactcgctgttttgcactgatc
cctttggaagacgtgaaacgcattttgcggaacacacaagccacagacaccaatgattta
tttctgcgttgttgcatggttcgagatggtatcgctccggtgaagtggcttgcaccatgt
tttgactttattttaagttccggcctcattggaacaaagtacaaggaattcctttgcagt
gttgtcccactcataattgattcttgtaccaaaatgaagtatgatgagagacagcattgg
ttcttggaactgattggtcagtttaaaaatgcagttcagctttcgtcggaaacttcgtcg
catcagaccgtaatgaaatctttgactttgttgtcacttgtgtccgctgcttggtgtgac
gtgcctatccttcaaggtgttgaatcacctttttcgacttgcccaccctttgatgcaacg
tattgtggctcaattgagaggttcccatatctactgccactgacattgtcaactttgttg
gggaaggagccctggaggcaaatcgcggaaaaggtaatagactggctgttatccttaaga
ggggatctcaggcttaaaaccgaaaatgtacatcatatgcttatacatgatacacttatt
tctttgcgggagacagaagcatatagaaaaacagcgttgtggactgaagtagttgctgaa
ctccaccctaagtaa
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integrated database retrieval system
