Stylophora pistillata (Smooth Cauliflower Coral): 111325088
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Entry
111325088 CDS
T05774
Name
(RefSeq) protein SMG5-like
KO
K11125
protein SMG5
Organism
spis
Stylophora pistillata (Smooth Cauliflower Coral)
Pathway
spis03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
spis00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
111325088
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spis03019
]
111325088
03032 DNA replication proteins [BR:
spis03032
]
111325088
Messenger RNA biogenesis [BR:
spis03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
111325088
mRNA cycle factors
Common to processing body (P body) and stress granule
111325088
DNA replication proteins [BR:
spis03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (animals)
111325088
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EST1_DNA_bind
EST1
PIN_4
Motif
Other DBs
NCBI-GeneID:
111325088
NCBI-ProteinID:
XP_022784587
LinkDB
All DBs
Position
Unknown
AA seq
1016 aa
AA seq
DB search
MRMKKVSVVEENNGKTQGKEGSKLNRSSVQLANRVDIQLRSAVEWQDLFHPDAVVLRQRL
RSLCESLILQHSKDYGRRAEERLWRKVFYDVIQKLRNHRKILEGDTLPLDGALRTHLSSA
AGYYYHLLTHLQRRYHLAIDGILSWGLPSRHQAENQDEEVQSWALKACQRCLIFLGDIAR
YQSDIEGEDAIKLAERFYSEAALTNTDIGMPQNQLGTLAGTKAYGCEGAYFYLRCLLSKE
VFDGAEGNLLRIFEKNRSILHRIKELPLDEPRRKERLKRFLVYFLYLQDVLYQHENSPEI
SSEDIGHLCQSVLQDFSSVLSVDPASSNPSHNSSLENGLIAAQENGSLEDDVTEDIEDVI
SSSLMVKLVVMAIAAVTRLQSKGSQESSVAIAFTLAFLSLLLQHCISSLEIYLAKEHSTA
ESQVMNGPATAALSHNGLNSEKLSKHDNSVAGLTAKSHLNRNKAIKNVLKHRRRRRRRRN
IDYSFDSYSASGSDLEESEDNEENEDSDLSEGGEMDGELEDLISDEDDSEDVYVESESDE
EGSNTGSQPKTISMAANGRHLLKETQHKPVDKSPCHQTPSEKLGSRAGLLGQNGISLGKV
FRPDLFSDVSDAETESSVASRAEILRDCVESNLLKAIANQKLLPAIKVMTDWLRLNSELV
MTCVESLSALWSRLALLLNKFPSPDQMIVAVPLPRQQTWQSVLDEPLDKDWIQTRGLPED
MFLLGFTPLTPIHSRLDRKWSRLTRDCYYLEAAVRVQCLRSFGMKMASTQELSSFDWDQN
TKQFLGPQQMAEREQVMAVDKRPAPLPVGDHDRRARVMKVMAQQLLQSEVAELESTLNTA
PQDGPVYVIPDTMALCTQLHLVRRLIASEKLVVIIPIQVISALDDLKKYDSGAREATKFL
EQEFKKGNRWIRAQKENETLDGQRRRGRYEDVAVWRFNQIVSCCRYFLRQTGKGLVTLLT
GSTSYEAPKRGQRKGVTSSGTQATPEAMEFARSCGVNVESLRAFCARFSKQYKAVT
NT seq
3051 nt
NT seq
+upstream
nt +downstream
nt
atgagaatgaagaaagtttcagtggttgaggaaaacaatggtaaaactcaaggaaaagag
ggaagcaagcttaacaggtcctctgtgcaattggcaaatagagttgatattcagctgagg
tctgctgtggaatggcaagatctttttcacccagatgctgttgtactgcgtcagaggcta
agatccctgtgtgaaagccttattcttcaacattccaaggactatggccgtagggctgaa
gaacgactttggagaaaggtcttttacgatgtcatccagaagctcaggaaccatagaaag
attctagagggtgatacccttcctctagatggagctctccgcacccatctgtcctctgca
gcaggatattattaccacttgttgacacatcttcaacggcgataccatcttgctattgat
ggtatattgtcttggggattgccatccaggcaccaagctgaaaatcaggatgaggaggtg
cagtcatgggcattaaaagcatgtcaacgctgtctcatattccttggagatatcgcacgg
tatcaatcagacattgaaggagaagatgctattaaacttgctgagaggttttactctgaa
gcagctcttactaacactgacataggcatgcctcaaaaccaacttggaacccttgctggc
acaaaagcctatggttgtgagggagcctatttttacctaagatgtttgttgtccaaggag
gtgtttgatggcgctgaaggaaacttgctgagaatttttgaaaagaaccggtccattctg
cataggattaaagagttgcctttggatgagcccagacgcaaagaaagattaaagaggttt
ctagtctacttcctgtacctccaagatgtgttgtaccagcatgagaattcaccggagata
agcagtgaagatattggccacctttgccagtcagtgttacaagacttcagtagtgtcctg
tctgtagatccggcctcctccaatccaagccacaactcatcactagaaaatggtctgatt
gctgcccaggaaaatggcagtctggaggatgacgtcactgaagacatcgaggacgtcata
agcagctcgcttatggtgaagttggttgtcatggcgattgcagccgtgaccagattgcag
tcaaagggttctcaagagtcgtcggtagcaatagcgttcactttagccttcttatctctt
cttcttcaacactgcatttcatcattagagatttacttagcaaaagaacactctaccgcc
gaatcccaagtaatgaacggaccagcaactgctgcgctctcgcacaacggcttgaactcg
gagaagttgtcgaaacacgataattccgtggcaggactcacagcgaaaagtcatttaaac
cgcaacaaagcaatcaagaacgtcttgaaacatcggcgacgaaggaggagacgaagaaat
atcgattacagttttgacagctacagtgccagcggaagtgatttggaggagtcggaagac
aatgaagaaaacgaagacagcgatttgagtgaaggcggtgaaatggacggcgagttggag
gatttgatcagcgatgaggatgatagtgaagacgtgtatgtggaaagtgaatcagacgaa
gaaggtagtaacaccggatcccagccaaagacaatatccatggctgctaatggacgacac
ctattgaaggaaacacagcataaaccagtagacaagtcaccatgccatcaaactccttca
gaaaagctgggatctagagctggtttactgggacagaatgggatttctttggggaaagtt
tttaggccggatctgtttagtgatgttagcgacgcagaaacagagtcatcagtagcctca
agagctgaaatacttcgagattgtgtggaatccaatctgctgaaggccatagccaatcaa
aagctgttacctgccattaaggtgatgaccgactggctgcggctcaacagcgaactggtg
atgacttgtgttgagagcctcagcgccctttggtcaagactggctcttctactgaacaag
tttccatcgccagaccaaatgattgttgcagttccgttaccaagacagcaaacatggcag
agtgttcttgacgagccgctcgataaggattggatccaaacacgtggtctaccagaagac
atgtttctgttaggatttactccactgacccctatacacagtaggctcgacaggaagtgg
agcaggcttacgagggactgttactatcttgaggctgcagttcgagttcagtgtttgaga
agctttggaatgaagatggcatctactcaggagcttagttcgtttgattgggaccagaat
accaagcagtttcttggacctcagcagatggcggaacgagaacaagtgatggctgttgat
aaacgaccagcgccactgcctgtgggagatcatgatagacgagccagagtgatgaaggtg
atggcgcaacagctattacagtctgaagtggctgaattggagagcacccttaacacggct
cctcaggacggaccggtttatgttattcctgataccatggcactgtgtactcagttacat
ctggtgcgaagattaatcgcctcggagaaacttgtggtcatcattcctatccaagtgatt
tctgcgcttgatgatctgaaaaagtacgacagcggtgcgagagaggccactaagtttttg
gagcaggagtttaaaaaaggaaacagatggattagagctcaaaaagagaatgaaacttta
gatggacaacggaggcgtggacgttatgaggacgtggcagtgtggcgtttcaatcaaatt
gtcagctgttgtcgctacttcctgcgtcaaactggcaaaggccttgtgactttactaacc
ggaagtacctcgtatgaggctccaaagcgaggccaaagaaagggtgtaacctctagtggt
acccaggctaccccagaggcaatggaatttgcgcgaagctgcggagtcaacgtggaatca
ctgcgcgcgttctgtgcccggttctccaagcagtataaggcagttacgtga
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integrated database retrieval system
