Stylophora pistillata (Smooth Cauliflower Coral): 111325250
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Entry
111325250 CDS
T05774
Name
(RefSeq) protein SMG8-like
KO
K18734
protein SMG8
Organism
spis
Stylophora pistillata (Smooth Cauliflower Coral)
Brite
KEGG Orthology (KO) [BR:
spis00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spis03019
]
111325250
Messenger RNA biogenesis [BR:
spis03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
111325250
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Smg8_Smg9
Motif
Other DBs
NCBI-GeneID:
111325250
NCBI-ProteinID:
XP_022784756
LinkDB
All DBs
Position
Unknown
AA seq
1020 aa
AA seq
DB search
MADSGAKKASVEFFQHLISSPESCMDDKVCVVGIFGKDNIGYKSKAVHLNGTIGKEVFKI
DFLDGTFKKKDTDEFSCDINVYHDVEQRIIYLHLVSVYDVSRLLQLCKQAPQDAQNAACH
QYWMSHEFYYACAMMFLFSVSHIVVLLHPSQTFDLNYIRLFRTLASTRHQLLPQISQLLA
GVDGIPDIWRQTGRPCIPRLVCSLRQRVPFRDPSQVSGKSQVTYASKTKGKQQIITPQKK
LQHSVEDQLYSIMRKARLLGSLSSSSLFTVNSSHAFVHVQPCSTNFDPVAVLLNTLAKPA
INTKWVETSPLLKNSKFLKREFLESGGDSEAYSADDVLFRDYLKQQIDHLMTGDAGRDGV
AEGRRGTHVEVPSCRLWARVSFALYEFFLTPKSELTAPLNAMVSNLDLDMKFSEAYCHIY
LTSVGGYSGMTFMGHPRKGSFCLKNVTCXFCAFSPQYHRVPAEGEVPSDPVSEESKELGV
TPCKPHSSRITSFSACNCGRIQDHREDPFDLKAANVDFFKMLQSKCCFSLVHLFFPFHPI
SLSSKISHKTSTEMSDEAPLLEMPSETVSPMREEVKSGEGGGEGQPSDETSNSETPAVPV
APTTGSIPIPNSGVPARTDNLGSLGHSVSSAYGASGYQSTLEMMSHEGSEFRSMPSEFKS
VVSVGIPGEMSMGNSQDVLSAVGEHVPDLHSFERFSSRDEMEQIYLETMLNSDSPPGILP
RFPSWSLCRLGSASTYNPAKGLDQPGFFPNSNYLLAWDIPLLNESQSDLTSQFDGKGKHL
GSKQMTEEAWPTLNELPSAGSNVSSLPLHQALTYARRQCSDYKANSLPLISSATTGKGAS
GASRQRGRTSREGALPTVRAYIGQEYECPRGHRFICSGPDKMVKATSSGHVKETALKLVT
SDMPLYFPCPCRSSKPLMAQMMRVFIVTPDSPVLVTLNPRVQPSLPPCPVFYPGINAGVT
LPPGSFCVLRLPYVYVSDLGPILPPGDSQPLLSCRVLKGLFSVMGLVQDTPRENVVEGRR
NT seq
3063 nt
NT seq
+upstream
nt +downstream
nt
atggcggacagcggagcaaagaaagcgagtgtggagttttttcagcatttaatcagttct
ccggaaagttgtatggatgacaaagtatgtgtggtggggattttcggcaaagacaacatt
ggctacaagtcgaaagctgtacatctgaatggaaccattggaaaagaagttttcaagatt
gactttctagatggtacattcaagaagaaggatacagatgaattttcatgtgacattaat
gtctatcatgatgtagaacagaggatcatttatttacaccttgtatctgtgtatgatgtg
tcaagactgttacaactttgtaaacaagctccacaagatgctcagaatgcagcatgtcat
cagtattggatgtcccatgaattttactatgcctgtgcaatgatgttcctgttctctgtc
tctcacattgttgttcttttgcatccgtcgcagacttttgatctaaattacatcaggctg
tttcgcacattggcttcaacaagacaccagttactgcctcagatatcccagctgttagct
ggtgtggatggcattcctgacatttggaggcaaactggacggccttgtattcccagactg
gtgtgttccctgagacagcgtgttcctttcagggatccttcacaagtgtcaggaaaaagc
caggttacgtatgccagcaagacaaagggaaagcagcaaatcatcaccccacaaaagaaa
cttcagcattctgtagaggatcagctttacagcataatgagaaaggccaggctcctagga
agtcttagttcaagttccctgttcactgtaaactcaagccacgcctttgttcacgtgcag
ccatgctcaaccaactttgaccccgtcgcagttctcctaaacactctggccaaaccggct
attaacactaaatgggtggagacgagccctcttctgaagaatagcaaattccttaagaga
gaattcttagagtcaggaggggacagtgaggcatattccgcggatgacgtgttgttccga
gactacttgaaacagcagattgatcacttgatgaccggagatgctggacgggatggagtg
gctgaaggacgcagaggaactcatgtagaggttccatcttgccgtctgtgggcacgtgta
tcgtttgccctctatgaatttttcttgactccaaagagtgaattgactgctcctctcaac
gcgatggtatctaacctggatctcgacatgaaattctctgaggcctactgccacatttac
ctcacttcagtgggaggatattctgggatgacctttatgggccatcctcgcaaagggagt
ttttgcctcaaaaacgttacttgtanattttgtgcattttctcctcagtaccaccgggtc
cctgcggaaggagaggtgccctccgacccagtctccgaggaatctaaggagctcggagtt
actccatgtaagcctcactcaagtcgtatcaccagtttcagtgcatgcaactgtggaagg
atacaagatcacagagaagatccttttgatctcaaggcagccaacgtggacttcttcaaa
atgcttcagtcaaagtgttgtttttcgctggttcatctgttctttccatttcatccaatc
tctctctcttcaaaaatctcccacaaaacctcaacggaaatgtcagatgaggcccccctc
ttggagatgccatcagagacagttagtcctatgagagaagaggtcaaatccggggagggt
ggtggtgaggggcaaccgagtgacgagacgtctaacagtgagacgcccgctgtaccagtt
gccccaacaactggatctattcccattccaaactcgggcgtccctgccagaacggacaat
ttgggaagcctggggcacagtgtcagttctgcatacggggctagtgggtaccaatctacg
ctcgagatgatgagtcatgagggctctgaatttaggagtatgccatccgagttcaagagt
gttgtatccgtgggaattccgggagaaatgagcatggggaattcccaagatgtcctctcc
gcggtgggggagcacgttcccgacttgcactctttcgaacgattttcgtcgcgtgatgaa
atggaacagatctatctagaaaccatgttgaacagtgattcacctcctggtattctaccc
cgctttccctcctggtcgctctgtcgtctgggaagcgcaagtacctacaatcccgccaaa
ggtctagaccagccgggatttttcccgaacagcaactatttgttggcttgggacattcct
ttgctgaatgaaagccagtccgatttaacgagccaatttgatggaaagggtaagcacttg
gggtctaagcaaatgactgaagaggcgtggccgacgctgaacgagctcccttccgccgga
agtaatgtttcgtcacttcctttgcaccaggctctgacttatgctcgtcgccagtgttca
gattataaagcaaattcccttccattgatatcgagtgcaacaacagggaaaggcgcgtct
ggagcctctcggcagcgtggtaggacctcccgtgaaggggcactaccgacagtgagagcc
tatataggacaagaatatgagtgccctagaggacatcggtttatctgctcaggcccggac
aagatggtgaaagcgaccagttccggtcacgtgaaggaaacagccctaaagctagtgacg
tcagacatgcctctctattttccatgcccctgtcgctcatcgaaacctctaatggctcaa
atgatgcgtgtctttatagtcacacccgattcacccgtactcgtgacccttaacccgagg
gtccaaccttcccttccgccatgtcctgtgttttaccccggtataaatgcgggtgtcacc
cttcccccaggaagcttctgcgttttgagattaccgtacgtgtacgtctcagatctcggt
ccaattctaccgccaggtgactcgcaaccgttgttgtcgtgtcgtgtgttgaaggggtta
ttttccgtaatggggcttgttcaggatactccaagagaaaacgttgtcgagggaagacgc
tga
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