Stylophora pistillata (Smooth Cauliflower Coral): 111325521
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Entry
111325521 CDS
T05774
Name
(RefSeq) regulator of nonsense transcripts 3B-like
KO
K14328
regulator of nonsense transcripts 3
Organism
spis
Stylophora pistillata (Smooth Cauliflower Coral)
Pathway
spis03013
Nucleocytoplasmic transport
spis03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
spis00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
111325521
03015 mRNA surveillance pathway
111325521
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spis03019
]
111325521
Messenger RNA biogenesis [BR:
spis03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
111325521
mRNA cycle factors
P-body specific factors
111325521
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Smg4_UPF3
RRM_1
Motif
Other DBs
NCBI-GeneID:
111325521
NCBI-ProteinID:
XP_022785083
LinkDB
All DBs
Position
Unknown
AA seq
580 aa
AA seq
DB search
MGKSEVEKPPGAPKTKKEKIYSPTKVIIRRLPPSLTEEQLKEELGDFPENDFFYFVGSNM
SFGPISFSRAYINFKNRDDIIKFRDQFDGYCFVDSRGVEYPAVVEYAPYQAVPKKKVKKD
TKIGTILEDPDYKAFLESLNKDEEPPPSVEAHLEEIEAKKSSSSAAKKTTPLLEYLKMKR
SPRGRPMSSRNISDKKRRPDREELPKSPKKSSNLSSNKDSRGKSGSHPPKEEKPKDERKD
ANAKDGSRKKDEQERKGSKEKKQAPLSSKEKSDSKSPPKGKEEKGRPESGRFGRRPDSRR
SDDRRPEDRRNSNRRDRRDTGDSSGSDRGRDDRSRKESGSDGSGRRDRRPESRRDSRPAR
EPEDKPKGREPLPKAANADKGGKSGGEKEKEQINATSKENETEKNRKEEDNSEAGDAKPS
RERERGAAKEEKARSEEEIIRQRRLRNKDRPDRAIYQPRSASRGGGSKSDAPKATESAEP
KDRAKDSRTKEKNREAERETRKNRDDKPRDRYRDDRRERDRDRDRDRRSDRDRDRERERP
REKARERDPDQTESTKEERDNQKKAEANESVSNETKTTTS
NT seq
1743 nt
NT seq
+upstream
nt +downstream
nt
atgggaaaaagtgaagtcgaaaaaccacctggtgcacccaaaaccaagaaagaaaaaata
tattctccaacaaaggttataatccgccgtctacctccatctcttaccgaagagcaattg
aaagaagaacttggagactttcctgagaatgactttttttattttgtcggtagtaacatg
agctttggtcctatctcattttcaagagcatacatcaactttaaaaatagagatgatata
atcaagttcagagatcagtttgatggatattgttttgtggacagcagaggtgtagaatat
cctgctgttgtggaatatgctccttaccaagctgtacctaaaaagaaagtcaaaaaagat
acaaaaattggaactattttagaagatcctgactacaaggctttcctggaatcactaaac
aaggatgaagaacctcccccaagtgttgaggctcatttggaggagattgaagctaagaaa
tcttcatccagtgcagcaaagaagactaccccactcctggagtacttaaagatgaagcgg
agtccacgcggaagacccatgtcatctcgaaatatttctgataagaagagaaggcccgac
cgagaagaactaccgaagtcaccgaaaaaatcatcgaatttgtcttccaacaaagattct
cgtggtaaaagtggcagccatccgccaaaggaggaaaaacccaaagacgagaggaaagat
gcaaatgccaaagatggaagtcgaaaaaaagatgagcaggaaagaaaaggaagtaaagaa
aaaaagcaagcaccattgtcttccaaagagaagtctgattcaaaatcccctccgaaagga
aaagaagaaaagggtcgacctgaatcaggaagattcggaaggcgtcccgacagccgacgc
tccgacgacagacgaccagaagacagacgaaatagtaatcgtagagatcgaagagataca
ggtgatagttcgggaagcgatcgtggacgtgatgatcgctcccgaaaggaaagcgggagt
gacggaagcgggcgacgcgatcgaagaccggagagtcgaagggattcgcgaccagctcga
gaacccgaagataagccgaaaggaagggaacccttacctaaagcagccaatgctgacaag
ggcgggaaaagtggtggagagaaagagaaggaacagattaatgccacgtcaaaggaaaat
gaaacagagaaaaatagaaaggaggaagataactcagaagcaggtgatgccaaaccctcc
agagagagagagaggggggctgctaaggaagagaaagcgcgaagcgaagaggaaatcatt
cggcaacgacgattacgaaacaaggatcgtcctgatcgagccatttaccaaccaagatca
gcttcacgaggaggaggctctaaaagtgacgctcctaaagcaactgaatcagcagaaccg
aaagatagagccaaggactctaggaccaaggagaagaatcgtgaagcggaacgtgaaaca
agaaagaaccgtgatgataaaccacgcgatcgatatcgtgacgatcgaagagagcgtgac
agagaccgtgacagagatcgacgaagcgatcgtgatagagatcgtgaacgtgaacgtccg
cgagaaaaagcgcgtgagcgtgacccggaccaaactgaatccacaaaagaagaacgagac
aatcagaaaaaggctgaagccaatgaaagcgtctccaacgaaactaagacaacaacttct
tga
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