Stylophora pistillata (Smooth Cauliflower Coral): 111326151
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Entry
111326151 CDS
T05774
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit-like
KO
K07466
replication factor A1
Organism
spis
Stylophora pistillata (Smooth Cauliflower Coral)
Pathway
spis03030
DNA replication
spis03420
Nucleotide excision repair
spis03430
Mismatch repair
spis03440
Homologous recombination
spis03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
spis00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
111326151
03420 Nucleotide excision repair
111326151
03430 Mismatch repair
111326151
03440 Homologous recombination
111326151
03460 Fanconi anemia pathway
111326151
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
spis03000
]
111326151
03032 DNA replication proteins [BR:
spis03032
]
111326151
03400 DNA repair and recombination proteins [BR:
spis03400
]
111326151
Transcription factors [BR:
spis03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
111326151
DNA replication proteins [BR:
spis03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
111326151
DNA repair and recombination proteins [BR:
spis03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
111326151
MMR (mismatch excision repair)
111326151
DSBR (double strand breaks repair)
HR (homologous recombination)
111326151
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
DUF223
CDC24_OB3
DUF936
IBR
Motif
Other DBs
NCBI-GeneID:
111326151
NCBI-ProteinID:
XP_022785824
LinkDB
All DBs
Position
Unknown
AA seq
623 aa
AA seq
DB search
MLSEGAIQKIISNPVEEHPQKPVLQILGIKQIQSRGSDGKGNDRYRLVLSDGIHVLTSAM
LATQLNEMVTSEQLEVKAVIQLNKYICNVIQETRKVLILMDVTVIKPGREIPGKIGDPKN
LNADPSNDRQNPPQQNGNSAPQTMSVGVKAVMANGKSAGGTSRGAGLASATYGSHKPLAS
RGDNTRSVFPITSLTPYQNRWTIRVRVTSKPKVRTYNNSRGEGRVFNVDLVDESGEIRAT
GFNEAVDKFYDLLELDKVFYISKCSLRTANKKFSTIKNDYELFLNNDSLIEPCDDTCDLP
TMQYNFVEIGDLGNIDADALVDILGIVVSADEVTQITTRTTNRQVSKRDITLLDRSEKSV
RATLWAEEAETFDEFVGKFPVLALKGAKVSDFGGRSLSILGSTNMRINPMDLQEAHSLRG
WYENVGKDSNIESLSGLRSDGGGLGSGYKTFFQMDHENLGMGDKADYFTSKATVLFMKKD
NCLYKACPTAECNKKVIDEGDGNYRCEKCNKTYPNFKYRLLLLTNLADFTGSHWVTCFQE
TAELLLKITADELGQMRDSGDERAFDHIFQEANFKTYIFRIRAKMETYNDETRVKCTAAG
VSPLDIMQEGKRMIAEIQKLRML
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
atgttaagcgaaggggcaatccagaaaattatcagtaatccggtggaagagcatccacag
aagccagttttacaaattttgggaataaaacaaattcaatcaaggggaagtgatggtaaa
ggcaatgaccggtacaggcttgtactgtctgatggcattcacgtcctaacatctgctatg
ctggctactcaactaaatgagatggtgacttcagaacaattagaagtgaaagctgtcatt
cagctgaacaagtacatctgcaatgttattcaagaaaccaggaaagtgctgatactaatg
gatgtgactgttattaaacctggaagagaaattcctggaaagattggagatcccaaaaac
ttaaacgctgatcctagtaatgatcgccaaaatcctccacaacagaatggaaatagtgct
ccacagaccatgtcagttggtgtgaaagctgtgatggcaaatggtaaatcagcaggtgga
acttcaagaggtgcaggactggcctctgctacgtatggaagtcacaagccgcttgcttca
agaggggataatacaagatctgtttttccaataacatccttaacaccatatcagaacaga
tggacaattcgtgtacgtgtaacaagcaagccaaaggtccgtacttacaacaactctaga
ggagagggccgtgtctttaatgttgaccttgtggatgagtcgggagagatcagagctact
ggattcaatgaagcagttgacaagttttatgacttgcttgaacttgacaaggtgttttat
atctccaaatgctctctgagaactgcaaacaagaaattctcaaccatcaagaatgactat
gaactctttctgaacaatgatagtttgatagagccatgtgatgatacttgtgatctacca
accatgcagtacaattttgttgaaattggtgacttgggaaatattgatgcagatgcactg
gttgatatattaggtattgtggtcagtgcggatgaggtcacacaaataacaactagaaca
actaacagacaggtttcaaagagggatatcactctattagacagatcagagaagagtgtg
agagcaactctttgggcagaagaggctgagacatttgatgagtttgttggaaagtttcct
gttctcgccctaaaaggggcaaaagtctcagactttggaggacgttctttgtcaatcttg
ggttcaacaaacatgaggatcaatcctatggacctacaggaagctcatagtttgcgtgga
tggtacgagaatgttggcaaagattcaaatatagagtctctctctgggctcagatctgat
ggaggaggtttgggttctggttacaaaaccttctttcagatggaccatgaaaatcttggt
atgggtgacaaggcggactatttcacttctaaggccacagttttgttcatgaagaaagac
aactgtttgtacaaggcatgccctactgcagaatgcaacaagaaagttattgatgaggga
gatggtaattatcgctgtgagaagtgtaacaagacctaccccaacttcaagtatcgtctt
ttgttactaacaaacttggctgatttcactggtagccactgggttacctgtttccaagaa
acagctgagttgcttctgaaaataactgctgacgaactgggtcagatgcgagactcgggg
gatgagcgtgcctttgatcacatttttcaagaggcaaacttcaagacgtacattttcagg
attcgagcaaagatggagacgtacaatgatgaaactagggtcaaatgcacggctgcaggg
gtgtctccattggatattatgcaggaaggcaaacgaatgatagccgagatccagaaactg
agaatgctttga
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