Stylophora pistillata (Smooth Cauliflower Coral): 111327008
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Entry
111327008 CDS
T05774
Name
(RefSeq) exosome complex component RRP43-like
KO
K12586
exosome complex component RRP43
Organism
spis
Stylophora pistillata (Smooth Cauliflower Coral)
Pathway
spis03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
spis00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
111327008
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spis03019
]
111327008
Messenger RNA biogenesis [BR:
spis03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
111327008
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
111327008
NCBI-ProteinID:
XP_022786835
LinkDB
All DBs
Position
Unknown
AA seq
275 aa
AA seq
DB search
MAADFKTAQPLEYYRQFLKEDVRPDGRALLEFRKTILNVGSISTAEGSALVKLGNTTVVC
GVKAEFAVPSQDKPRHGFIVPNVDLPPLCSSRFRPGPPSEQAQVLSQFVADVISNCEPIS
VEDLCIVEGKLSWVLYVDIMCLSYDGNITDACLIAAFAALQNTRLHSVTIDEETQTPLPS
EERGVLLNIRAHPVSATFCIFDDTVLFVDPTDEEENLVTGIVTVVLTDDDKIAAVHKPGG
SPLADDKLQECFKVALISSKEVRDLTKTACINVDR
NT seq
828 nt
NT seq
+upstream
nt +downstream
nt
atggcggccgatttcaagactgcacagccattagaatattacaggcagtttctgaaggag
gatgtaaggccagatggtcgcgcacttttagagtttcgaaaaacgatcctaaatgttggt
tctatatcgacagccgaaggctcagctttggttaaacttggaaacacgacagttgtctgt
ggagtgaaggcagagtttgctgtgccaagtcaggataaaccaaggcatggattcatagtt
cccaatgtagatttacctcctctttgttcctctcgtttccgtccgggtcctccaagtgag
caagcacaagttttgagtcaatttgtggccgatgttatctccaactgtgaaccaatcagt
gtagaggatttgtgtattgtggaaggcaagttgtcatgggtcctgtatgtggacattatg
tgtcttagttacgatggaaatataacagatgcatgtctcatagctgcttttgctgctctc
caaaacactcgccttcattcagtgacaatagatgaagagacacaaactcctttgccatct
gaagagagaggagttctgttgaacatcagggcacatcctgtctctgctacattttgtata
ttcgacgacacagtattgtttgtcgacccaaccgatgaagaagaaaatctagtgacagga
attgtgacagtggtcctcacagatgatgataaaattgctgcagttcataaaccaggtgga
tcacccctagctgatgataaactacaggaatgcttcaaagtggccttgataagttcaaaa
gaagtcagagaccttacaaaaacagcttgtataaatgttgacagatga
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