Stylophora pistillata (Smooth Cauliflower Coral): 111327178
Help
Entry
111327178 CDS
T05774
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA1-like isoform X1
KO
K02999
DNA-directed RNA polymerase I subunit RPA1 [EC:
2.7.7.6
]
Organism
spis
Stylophora pistillata (Smooth Cauliflower Coral)
Pathway
spis03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
spis00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
111327178
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
spis03021
]
111327178
Enzymes [BR:
spis01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
111327178
Transcription machinery [BR:
spis03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
111327178
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_1
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-GeneID:
111327178
NCBI-ProteinID:
XP_022787031
LinkDB
All DBs
Position
Unknown
AA seq
1734 aa
AA seq
DB search
MFGSNAVPYHHLEGLRLALYTPDETKKISVKNLTNPETFDALLHPNFGGLYDPALGPTDK
DDLCGTCAQNYIYCPGHFGHVELPLPVYHPLFFKELLAILRSSCFRCGDLLFSRAVMHVF
ISQMKVLDYGLITVAEELSQMAFGSLNNPDSSDYKQHSLPEDKMCIAAVDEYLRKEFNNI
DKKGARRESTAKNVTDCRHRIIKEFMYAHMGKKKRSCPGCEAPSRDVRSEYHSRVFMKGL
SLKEANKWVNTQLANAHLAQHDSLSVTNDSVENTDKREYTVDSVDDPAKRRDTNIKKLMV
QTYLTPVEVQKQIFKVWEKHGVFLSILYGAYPSPTAKRRWCSADMFFIEILPVAPSRFRP
LSKFDDKHFENPQTKNLKKIMEDCVLVRSCLQDLNNPLPDDKDAQLERRKKVFGKNAPAT
VPGKTATERLHSAWLMLQTDINCYIDSDLDKVSHLKFPGIRQILEKKEGLFRKHMMGKRV
DYACRSVISPDPFLNVDEIGIPEVFALKLTYPQPVTHWNVKQLRQAVINGPLQHPGASFV
ENEDGKITLLSKTDPNQRQAIAKRLLTPSTNIRTSVCRCKKVYRHLQNGDVLLLNRQPSL
HRPSMMAHKARVLPGEKTIRLHYANCKSYNADFDGDEMNAHFPQNELARAEAYNIASTNF
QYLVPKDGTPLNGLIQDHMVAGVRMTVRGRMFNRLDYQQLVYSAVSFKNSKIKMLKPCIV
KPCELWSGKQVISTVLLNIIPEEAKLLSMQGKAKIVGKNWITGKPKEQFLGLPLLKGDVM
SEAEVVIRQGHLLCGVLDKAHYGPTSFGLVHCCHELYGGVVAGYLLTALARVFTTFLQYQ
GFTLGVEDILVTEKADSKRRKFIKKGRVSGGEAAKEALGLSDECVRSTLEQKLQEAHHNV
DGSDMKQLDLSMKKKTDHYQDMINKACIPLGLLKRFPENNLQLMVLSGAKGSSVNCMQIS
CLLGQIELEGHRPPLMVSGRSLPSFLPYDTSPRAGGFVDGRFLTGIRPQEYFFHCMAGRE
GLVDTAVKTSRSGYLQRCLIKHLEGLLVNYDLTVRDSDSSLVQFYYGEDGLDVMKTSFLS
EKQFPFVANNYKAFLQQMNPKALLPHLHSEKALKLENKINKTMRKQKENQRERTSPYLCF
AADKSRELQNRKTTSDQLTFGRSETDLKMFHRWNEAPLTERKRYHKKSARFPDPVLSKLQ
PDRHFGAVSERILTSVKKYMEENPDKCLTEDELEESLKLPASKFKNLLYLKAFRALVEPG
EAVGLLAAQSIGEPSTQMTLNTFHFAGRGEMNVTLGIPRLREILMTASPNIKTPSMDLPL
KPRKRSQKLAKRLQRKLTKVTLAQVLQSVDVWESLPSKTSTGTRERWYRIRFQFLSGSSL
KDEFVVNSEGVLHYMETVFFKRVIGAATKAANVERGKRTIESVNNTEQPRNDSDREDDDD
DDDNADLSDEEAADGDANEAKQRKRREQHASYEAPDEDEQIVERELDEELERELDEDEEE
QWVYDGSKGKRKSKKSDEARIQRVLESDNHIGGYSYDVTKEEWCEVSLKFPAHNFKIQLS
SLIEKLAHKXVVYETPHINRCFLIENNDSVVLKTEGVNIREAWQYEDVLDLTKVYTNDIH
AMARVYGIEAAAKVIKKEIKNVFSAYGINVDPRHLSLISDYMTYEGTIKAFNRVGLESNA
SPFQKMSFETTTHFLRGAVLSGDTERLVSPSSRLVVGRVVGSGTGCFELLQPLC
NT seq
5205 nt
NT seq
+upstream
nt +downstream
nt
atgtttgggtcaaatgcagttccttaccatcatttggaaggtctaagactagctttgtat
acaccagatgaaacaaaaaaaataagtgttaaaaatttaacgaatcctgaaacgtttgat
gcgttgttacatccgaattttggaggtctttatgacccagcattaggtccgactgataaa
gatgacttgtgtggaacatgtgcacagaactacatttactgtcctggacattttggtcat
gttgagcttccgttaccagtgtatcatcctttattcttcaaagagttattggcgattttg
cggtcgtcatgtttcaggtgcggagatcttttattttcaagagctgttatgcatgtcttc
ataagccagatgaaagtgttagattatgggttaatcacagttgctgaagagctttcacaa
atggcctttggttctcttaataatcctgactcctctgattacaagcagcacagtctgcct
gaagataaaatgtgcatagcagctgtggatgaatatttaaggaaggagttcaacaatata
gacaagaaaggagccagaagagaatcaactgctaaaaatgtcacagattgcaggcataga
attatcaaagagtttatgtatgctcatatgggtaaaaaaaaacgttcttgtccaggatgt
gaagcaccttctcgggatgttagaagtgaataccacagtcgtgtatttatgaagggtttg
tccttgaaagaggcaaataaatgggttaacactcagttggctaatgcacacttggctcaa
catgattcactttcagtgacaaatgactcagttgaaaatactgacaagagagagtacaca
gttgattcagttgatgatccagctaaaagaagagataccaatattaagaaactgatggtt
caaacttacttaactccagttgaagttcaaaaacaaatttttaaagtttgggaaaaacat
ggtgtatttcttagcattctttatggagcatatccatctccaacagccaaacggaggtgg
tgttctgcagatatgttctttatagagatccttccagttgcaccatcaaggtttagacct
ctttcaaagttcgatgataaacattttgagaatccacaaacaaaaaacctaaagaagatc
atggaagactgtgtacttgtcagaagctgcctccaggatttgaacaatcctctacctgat
gataaggatgcacaattagaaaggagaaagaaagtttttggtaagaatgctccagctact
gtacctggtaagactgccactgaaagacttcacagtgcttggctaatgctacaaactgat
atcaactgctatattgacagtgatttggataaggtatcacaccttaaattcccaggaatc
agacagatactggaaaagaaagagggtttgtttagaaagcacatgatgggaaagagggtg
gactatgcttgcagatcggtgatttcacctgatccattcctgaatgtggatgagattgga
atcccagaggtatttgctttgaagctgacatacccacaacctgtaactcactggaatgta
aagcagctaagacaggctgtcattaatggtcctcttcaacatcctggggcaagctttgtt
gaaaatgaagatggcaaaataacccttctaagtaaaactgatcccaaccaaagacaggca
attgcaaagcgcctgcttacaccatcaaccaacataaggacatcagtttgccgttgtaag
aaggtctatcgacaccttcagaatggagatgttttgttgcttaacagacagccttcactt
cataggccaagtatgatggcacacaaggctcgtgtacttcctggggaaaagaccattcgt
ctccattatgccaattgcaagtcttataatgctgattttgatggtgatgagatgaatgct
cattttcctcaaaatgaattggctagggctgaagcctacaacatagccagcacaaatttt
caatacttggttcctaaagatggcacaccacttaatggactaattcaggatcacatggtg
gctggagtgagaatgactgtccgaggacgcatgtttaacaggttagattaccagcagctt
gtttatagtgctgttagttttaagaacagtaagataaagatgctaaagccttgcattgtc
aaaccttgtgagttgtggtcaggaaagcaggtcatctctacagtcttgcttaacatcatt
ccagaggaagcaaagctactgagtatgcaaggcaaagccaagatagttggaaaaaattgg
atcactggtaagcccaaagagcaatttcttggattacctctattgaagggagatgtgatg
tctgaggcagaggtggtgatccgtcaggggcatttgctctgtggtgtgttggacaaagcg
cattatgggcctacttcttttggtttagtgcactgctgtcatgagttgtacggtggagta
gtagctggatatctacttaccgctctggccagagtgttcacaactttccttcaatatcaa
ggattcaccctgggtgtagaggacatcctagttacggagaaggctgacagcaaaaggcgc
aagtttataaagaaggggagagtatctggaggtgaagctgcaaaagaggctcttggtttg
tccgatgaatgtgttaggtcaacgctggagcaaaagctacaagaggcccaccataacgtg
gatggaagtgatatgaaacagcttgacctgagcatgaaaaagaaaacagaccattaccaa
gatatgatcaacaaggcttgcattcccttgggtcttcttaaaagatttccagaaaacaat
cttcagctgatggttttgtctggtgctaagggctcctccgtcaactgtatgcagatttcc
tgcctcctggggcagatagaattggaggggcatcgaccaccccttatggtcagtggaagg
tctttgccctcatttctgccgtatgacaccagtcccagggctgggggatttgttgatggg
cgtttcttgacaggaatcaggccacaggagtatttctttcattgtatggcaggaagagag
ggccttgtggatacagctgtgaaaacaagtcgtagtggctatctccagcgctgtcttatt
aaacacctggagggtctgttagtcaattatgatcttactgtgcgagatagtgacagctct
cttgtgcagttttactatggtgaagatggcctggatgttatgaaaacttcttttctatct
gagaagcagtttccctttgtggcaaacaactacaaggcttttctgcagcaaatgaatccc
aaagctcttcttccccatcttcattcagaaaaagcactcaagcttgaaaacaagataaac
aaaacgatgagaaaacagaaagagaatcagagagaaagaacttcaccgtacctttgtttt
gccgcagacaagagtagagaactacaaaatagaaaaacaactagtgatcagcttacgttt
gggcgatctgagactgatctaaagatgtttcatcgatggaacgaagcacccttgactgag
cgcaaaaggtatcataagaaatctgctcgttttcctgaccctgtgttgtcaaagctgcag
ccagacagacactttggagctgtttctgagagaattttaacgtctgtaaagaagtacatg
gaagaaaaccctgacaaatgcttgactgaggacgagttggaagaaagtttgaagttacca
gccagtaagttcaaaaacctgttatacctgaaagcgttccgtgccctagtcgagccagga
gaagctgttggactcttggcagctcagtctattggtgaaccatctactcaaatgacactt
aatacgtttcactttgccggccggggtgagatgaatgtaactcttggaattccaagatta
agggaaattttaatgactgctagtccaaatatcaaaacccctagtatggacctccctctt
aaaccaagaaagagatcacagaagcttgctaaacggctgcagaggaaattaacaaaagtt
actttggcacaggtattacaatctgtggatgtgtgggagtcattaccatccaaaacttct
actggaacacgagaaaggtggtaccgcatcagatttcaatttcttagcgggtcgtcatta
aaggatgagtttgttgtgaactcagaaggcgttcttcactacatggaaacagttttcttt
aaaagagtcattggggctgctacgaaagccgcaaatgttgaacgtggcaaaagaactatc
gagtctgttaataacacggagcagccaagaaatgatagcgacagagaagatgatgatgac
gatgatgacaatgctgatctttctgacgaagaggctgctgatggtgatgctaatgaagca
aaacagaggaagagacgtgagcagcatgccagctatgaagccccggatgaggatgaacag
atagttgaacgagaacttgacgaggaacttgaacgagaacttgatgaagatgaagaagaa
caatgggtgtatgatggaagtaaaggcaaacggaaatcaaagaagtccgatgaggcgcga
atacagcgtgttttggaaagtgacaatcacattgggggttattcctacgatgtcacaaaa
gaggaatggtgtgaagtgtccttgaagtttcctgctcataattttaagatccaactgtct
tctctgattgagaaactcgctcataagngtgttgtctatgaaacgccgcacataaatcga
tgctttttaattgaaaataatgatagtgtggtgctcaaaacagagggagttaacattcga
gaagcgtggcaatatgaagatgtattagacttgacaaaggtgtacaccaacgatattcat
gctatggcaagggtttatgggattgaagctgcagcgaaagttataaaaaaggaaataaag
aatgtcttcagtgcgtacggaatcaacgtagatccacgtcacctcagtctcatatcggac
tacatgacttacgaagggacaatcaaggcatttaatcgcgttggacttgaatcaaacgct
tctccttttcaaaaaatgagttttgaaacgacgacacactttcttcgtggagcggttctt
tcaggggacacagaacgtttagtttcaccatcgtcaagactagttgttgggcgggtcgtt
gggagtggtacaggatgttttgagctattgcaaccgctttgctga
DBGET
integrated database retrieval system
