Stylophora pistillata (Smooth Cauliflower Coral): 111327647
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Entry
111327647 CDS
T05774
Name
(RefSeq) replication factor C subunit 5-like isoform X1
KO
K10756
replication factor C subunit 3/5
Organism
spis
Stylophora pistillata (Smooth Cauliflower Coral)
Pathway
spis03030
DNA replication
spis03410
Base excision repair
spis03420
Nucleotide excision repair
spis03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
spis00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
111327647
03410 Base excision repair
111327647
03420 Nucleotide excision repair
111327647
03430 Mismatch repair
111327647
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
spis03032
]
111327647
03036 Chromosome and associated proteins [BR:
spis03036
]
111327647
03400 DNA repair and recombination proteins [BR:
spis03400
]
111327647
DNA replication proteins [BR:
spis03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
111327647
DNA Replication Termination Factors
ELG1-RFC complex
111327647
Chromosome and associated proteins [BR:
spis03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
111327647
DNA repair and recombination proteins [BR:
spis03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
111327647
Check point factors
HRAD17(Rad24)-RFC complex
111327647
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
Rad17
RCF1-5-like_lid
AAA_22
AAA_11
AAA_assoc_2
RuvB_N
AAA_24
AAA_16
DNAX_ATPase_lid
AAA_5
ResIII
DUF815
DEAD
AAA_14
PhoH
AAA_30
TIP49
AAA_7
AAA_19
Thioredoxin_6
AAA_2
bpMoxR
Mg_chelatase
IstB_IS21
AAA_3
AAA_28
ATPase_2
MCM
Gp44_lid
RNA_helicase
UBA_Rad5
Motif
Other DBs
NCBI-GeneID:
111327647
NCBI-ProteinID:
XP_022787611
LinkDB
All DBs
Position
Unknown
AA seq
330 aa
AA seq
DB search
MVVPEQKRNLPWVEKYRPNSLEDLISHRDIITTIKRFIEEDRLPHLLFYGPPGTGKTSTI
LAVAKQIYSAREFNSMVLELNASDDRGIGIVRGAVLNFASTRTIFKSGFKIVILDEADAM
TQDAQNALRRVMEKFTENTRFCLICNYLTKIIPALQSRCTRFRFGPLDNEQMKSRLEHVI
KTEGVQVSDDGMKSLIRLANGDMRKALNILQSTSMAFSTVDEVNVYTCTGQPLRSDIANI
VEWMLNEDFNTAYSNITELKTLKGLALQDILTEVHLYVHRVNFPQKIRIHLLEKMADVEY
RLAAGTSEKIQLSSLTAAFQVARDMVTPDS
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atggtcgttcctgagcagaagcgaaatcttccctgggtcgaaaagtacagacccaacagc
ttagaagatctaatctctcacagagatatcatcacaacaatcaaaagatttattgaggaa
gatcgattgccccatcttttattctatggtccacctggaactgggaagacctcaactata
ttagctgttgctaaacagatctactctgcacgagagtttaactctatggttcttgagctg
aatgcttcagatgatagaggtattggtattgttcgaggggccgtcttaaactttgcaagt
acaagaacaatttttaaatctggttttaaaattgtaattttggatgaagcagatgctatg
actcaggatgcgcagaatgccttacgaagagtaatggagaaatttacagagaacaccaga
ttctgtttgatctgtaattacctgacaaagattattccagctctccagtctcgttgtaca
aggtttagatttggacctcttgataatgaacagatgaagagtagattggaacatgtcatc
aaaactgaaggagtgcaagtttctgatgacggaatgaaaagcctgatcagactggcaaac
ggtgacatgagaaaagctttaaacattcttcagagcacctccatggcttttagcactgtt
gatgaagtgaatgtttacacttgtacaggacaacctctgagatcagacattgctaacata
gtagagtggatgctaaatgaggacttcaatactgcctatagtaatataacagaactcaaa
actctgaaaggacttgcacttcaagacattctcacagaagtacacctgtatgttcataga
gttaactttccacagaaaatccgaattcacttgttggaaaaaatggcagatgttgaatac
cgtctagcggctggaacctcagagaagattcaactcagttcactgacagcagctttccaa
gtagccagggatatggttactcctgactcatag
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