Stylophora pistillata (Smooth Cauliflower Coral): 111327850
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Entry
111327850 CDS
T05774
Name
(RefSeq) DNA repair protein RAD50-like isoform X1
KO
K10866
DNA repair protein RAD50 [EC:3.6.-.-]
Organism
spis
Stylophora pistillata (Smooth Cauliflower Coral)
Pathway
spis03440
Homologous recombination
spis03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
spis00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
111327850
03450 Non-homologous end-joining
111327850
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
spis03032
]
111327850
03400 DNA repair and recombination proteins [BR:
spis03400
]
111327850
DNA replication proteins [BR:
spis03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
111327850
DNA repair and recombination proteins [BR:
spis03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
111327850
BRCA1-C complex
111327850
NHEJ (non-homologous end-joining)
MRX complex
111327850
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_23
AAA_21
SMC_N
Rad50_zn_hook
SbcC_Walker_B
AAA_15
AAA_29
ABC_tran
HEF_HK
zf-C2HC_2
AAA_16
AAA_22
Motif
Other DBs
NCBI-GeneID:
111327850
NCBI-ProteinID:
XP_022787878
LinkDB
All DBs
Position
Unknown
AA seq
1319 aa
AA seq
DB search
MSSLEKMRIQGIRSYSHMEPSVIEFQKPLTLIVGPNGAGKTSVIECLNYMATGDMPPGGK
QSLFVHDPKVAGEQEVRGQIKLKFKDVTGSPIVVTRTLVSEQRGKKVVTRTMEGNVLREV
HGERRSLSSKCADINREMISFLGVSKAVLDNVIFCHQEESNWPLSEGKVLKQKFDEIFAA
TRYIKALEAIRKFQKEQVQTVKEYSIELAHLKANKDKADQIEVEMNESQGKIAATKDTVR
ELNTKLEPVELRLTELAVIADDVFELEKKVESLSTEKKQLSKVEIDLQDKITNPFDGSVE
ELHKIFSEFQSRVLEKEETLRENEGKLHKLGKDQQVLSDKRNKLFLDHGKLEQESKRHEA
NLMDRNQTIVKIAEDYGLKGYDKGPFSEDRVDQFIGEMKKKFQDVVENAKRQKQVFDESL
NKAQAKLDDVKKSQAQCEETIRLKTKLMRENQQKLRQIGQELSNVDASANRLKSLEEELQ
RGERDLQGAQESGNVDELSKDIDKLQTEKRKVDNELRQLREEQQAMHMQSTTQAKLDMLS
KEKNDKEDAIQKIMDRHEEDLKSTFGALGISESLYLRLQEHLRTKERELKESRNNLQKLN
QQLSATETRKRMILENLKEKEKEAERHKRQISEVCGENDYNTTREAIKDKIANLQDERGL
IGSLEKIYSKYVSKLDSEDVHSSGCPLCHRTFESDRQITALVSELRSKIRTLPERRVSME
RQLDHEQQRYDRVIELAPAKETLEKLENNQIPVVKSELEEMESEIQRIKDEITELEDVQS
VTESEAQSARDMEPDIRMLDKYKSELKEMDKNISLLQSKLRGVAPGRTMQSVSNELTDRQ
DRSDTLNNHIDRKRTQLSQLQRQLSDLKTNVHELKSQKLRLKAQLQTRTHLEQQKAELTA
NNSAFAREIEEAQADIAPIAEKLEELQEEKQRVVGEKEASDDENRKKLQEIRTRGDKVRE
KTAEIKRFVSDGGPMALQENEARLQEVEGRAEKLKSEKDAVSGEIDKLKNDISKQQIRAR
ELKDNIQLKSTQVEIQNIEKKMADVYKELRKFGDHQDLVSERQELQQRSDNLRKEKAHHE
GRLTGYEDDLGRCQKELRSDMYKNAEEKHRQQVIAMKTTEMANDDLGKYYKALDRAIMRY
HGMKMAEINKIIKEYWINTYKGNDIDTIEIRADEEEGSGAIKARRTYNYRVVMVKGDTAL
DMRGRCSAGQKVLASLIIRLALAETFCLNCGILTLDEPTTNLDEDNIESLANQLASVIRT
RHLQRNFQLVVITHDEEFVENLGRSDFVDYYFRIYKDENGFSKIVKQSVAALHREESFQ
NT seq
3960 nt
NT seq
+upstream
nt +downstream
nt
atgtcatctttggagaagatgaggatccagggaatccgtagttattcccatatggaaccc
agtgttattgagtttcagaagcctttaactttgattgttggacccaatggagctggaaag
acgtctgttatagaatgcctgaattacatggccacaggagatatgcctccaggtggcaaa
caaagtttatttgttcatgatcccaaggttgcaggtgaacaggaagtacgtgggcaaata
aagttgaaattcaaggatgttactggtagtcctattgttgtaacacgtacattggtttca
gaacaaagaggcaaaaaggttgtaacaaggacaatggaaggaaatgtcttgagggaggtc
cacggagagagacgcagtttgagttcaaagtgtgctgatatcaacagagagatgatttca
tttcttggagtatctaaagcagtgttggataatgtgattttttgccatcaagaggaatct
aactggccacttagtgaaggaaaagtgctcaaacaaaaatttgatgaaatctttgctgcc
acaagatacataaaggctttggaggcaattagaaaatttcaaaaagaacaggttcaaact
gtgaaagaatattccatagagcttgctcatttaaaagcaaataaagacaaggcagaccag
attgaagttgagatgaacgaaagccaaggaaagattgcagccactaaagatacagtcagg
gagctgaatacaaaacttgaaccagtggagctgaggttaactgaactggcagtaattgct
gatgatgtatttgaattagagaaaaaagttgagtcgttgtcaacagaaaagaagcagtta
tccaaagtagagatagacctgcaagacaagatcactaacccctttgatggttctgtggaa
gagctacacaagattttttctgaatttcaaagtcgagtcttggagaaggaggaaacctta
agagagaatgaaggaaaactacacaaattgggaaaagatcagcaagtactgagcgataaa
cgcaacaagttatttttggatcatggaaaacttgagcaggaatcaaagaggcatgaggcg
aatctaatggatagaaatcagaccattgtaaagattgctgaggattatggcttaaaaggt
tacgacaaaggccctttttcggaggacagagttgatcagttcatcggtgaaatgaagaag
aaattccaggatgttgttgaaaacgcaaagcgtcaaaaacaagtatttgacgagagcttg
aacaaagcacaggcgaagctggatgatgttaagaaaagtcaagcccaatgtgaggaaacc
attcgactcaagaccaaactcatgagagaaaaccaacagaaactgagacaaatcggccag
gaattgagtaacgtggatgcttcagcaaacagactgaagtcattagaggaagaactgcag
aggggggaaagggatctgcaaggtgcgcaagaaagcggcaacgtggatgagttgagtaaa
gacatagataaattgcagactgaaaagcgcaaggttgataacgaactgcgtcagttacgg
gaggaacagcaggctatgcacatgcagtctactacacaagctaaactggacatgctgtct
aaggagaaaaacgacaaagaagacgctatacagaaaatcatggatcgccatgaagaagac
ctgaaatcgacgtttggtgcactgggcatttcagagagcctttacctgagactgcaagaa
catctgaggacgaaagagagagaactgaaagaatccagaaacaatttgcagaaattgaac
cagcagctttctgcaacagaaacgcgtaaaaggatgattttagaaaacttaaaagagaaa
gagaaagaagcagagcggcacaaaagacaaatctctgaggtctgtggggagaatgattat
aacaccacaagggaagctatcaaggacaaaattgcaaatctacaagatgaacgaggactc
attggctcgttggagaaaatctattcaaagtatgtttctaaactggatagtgaagatgta
cactcgagtggctgtcctctgtgtcatagaacctttgagagtgacaggcagattactgct
cttgtttcagagctgagaagtaagatacgaactcttccagaaagaagagtgtctatggaa
agacagctcgatcacgagcagcaacggtatgatcgtgtcattgagctggccccagcaaaa
gaaactctggaaaagctggaaaacaatcaaattcctgtggtcaaatccgaactggaagag
atggaaagcgagatacaaagaattaaagatgagataacagagcttgaagatgttcagagt
gtgaccgaaagtgaggcgcagagtgctcgagatatggaaccagacattcgtatgttggac
aaatacaagtcagagttgaaggaaatggacaagaatatatctttgctgcagtctaaactc
cgtggagtcgctccgggtagaaccatgcagtcagtttctaatgaactcaccgacagacaa
gatcgctctgacactctcaataaccatattgatcgtaaaagaactcagctgagccaactg
cagcggcagctcagtgacctgaaaactaatgtgcatgagctcaagtcacaaaagctccgt
ttgaaagctcagttgcagacgagaacacacttagaacaacaaaaagctgaactcaccgca
aacaatagtgcctttgcgagggaaatagaggaggcccaggcagatatagcccctatcgcg
gaaaaacttgaagaactgcaggaagaaaaacaacgagttgtgggtgagaaggaagcttca
gatgacgaaaatcgcaaaaagctccaagaaataagaacgagaggagacaaagtgcgggag
aaaactgcagaaataaaaaggtttgtgagcgatggaggcccaatggccttacaggaaaac
gaggctcgtttacaagaagtggaaggtagagcagaaaaactgaaatcggagaaagatgct
gtgtctggtgaaattgataaactgaagaacgacatctctaagcaacagatacgggcccgt
gaacttaaagacaatattcagttgaagagtactcaggtagaaattcaaaatatcgagaag
aaaatggcagacgtgtacaaagaactgcgtaagtttggtgaccaccaggaccttgttagt
gagaggcaagaattgcaacagcgctctgacaatctaaggaaagagaaagcgcaccacgag
gggcgacttacgggttacgaggatgacctgggaagatgccaaaaggagttgcgcagtgac
atgtataaaaatgctgaggagaaacacagacaacaagttattgctatgaagaccactgaa
atggcaaatgatgaccttggaaagtactataaggctcttgatagggccattatgcgttat
cacggaatgaaaatggctgagatcaacaaaatcatcaaagagtattggatcaacacatac
aaagggaatgatatcgatacaattgaaattcgtgcagacgaggaagaaggaagtggagca
attaaagcacgacggacgtataactacagggtggttatggtaaagggagacacagcactg
gacatgagaggacgctgtagcgctggacaaaaggttctggcatctttgataatcagatta
gccctcgcagaaacattctgtctgaactgcggtattttaactctcgacgagccgactaca
aatttggatgaagataacatagagagtcttgctaaccaattagcaagcgtcatcagaacc
agacatctgcagagaaactttcaacttgtggtcatcactcatgatgaagagtttgtggaa
aatctcgggagaagcgactttgtagactactacttcaggatatacaaggacgaaaatggt
ttctcaaagatagtgaaacagagtgtggctgcattgcatagggaggaatcttttcagtag
DBGET
integrated database retrieval system
