Stylophora pistillata (Smooth Cauliflower Coral): 111329861
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Entry
111329861 CDS
T05774
Name
(RefSeq) replication factor C subunit 4-like
KO
K10755
replication factor C subunit 2/4
Organism
spis
Stylophora pistillata (Smooth Cauliflower Coral)
Pathway
spis03030
DNA replication
spis03410
Base excision repair
spis03420
Nucleotide excision repair
spis03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
spis00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
111329861
03410 Base excision repair
111329861
03420 Nucleotide excision repair
111329861
03430 Mismatch repair
111329861
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
spis03032
]
111329861
03036 Chromosome and associated proteins [BR:
spis03036
]
111329861
03400 DNA repair and recombination proteins [BR:
spis03400
]
111329861
DNA replication proteins [BR:
spis03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
111329861
DNA Replication Termination Factors
ELG1-RFC complex
111329861
Chromosome and associated proteins [BR:
spis03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
111329861
DNA repair and recombination proteins [BR:
spis03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
111329861
Check point factors
HRAD17(Rad24)-RFC complex
111329861
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
RCF1-5-like_lid
AAA_22
Rad17
AAA_assoc_2
AAA_16
AAA_11
AAA_14
AAA_24
AAA_28
AAA_30
Gp44_lid
Mg_chelatase
DNAX_ATPase_lid
SLFN-g3_helicase
AAA_19
DUF815
RuvB_N
ResIII
IstB_IS21
AAA_5
AAA_3
bpMoxR
AAA_23
AAA_7
TIP49_C
ATPase_2
Viral_helicase1
RNA_helicase
Hydantoinase_B
Motif
Other DBs
NCBI-GeneID:
111329861
NCBI-ProteinID:
XP_022790350
LinkDB
All DBs
Position
Unknown
AA seq
363 aa
AA seq
DB search
MDAFLRGQSSTASSSKLKLQTGEETAGSSNKRVVVPWVEKYRPRSVDEVAYQDEVVAVLK
KSLEGVDLPNLLFYGPPGTGKTSTILAIARQLFGPELMRSRVLELNASDERGIQVVRDKV
KKFAQLAASGIRADGKPCPPFKLVILDEADSMTPSAQAALRRTMEKETKTTRFCLICNYV
SRIIEPLTSRCSKFRFKPLSTDTLEKRLNMICEKEDVKCDSKAIQELIKISEGDMRKAIT
YLQSAHRLKGEDMVEADDISEIAGVVPIKMADKLFEACESDSFEKLDATVQEIIAEGHAA
AQVINQVHDRIIEMAELNDHQKSAIMEKIAIVDKCLCDGADEYLQILSLCSVMMQQFCHA
GQT
NT seq
1092 nt
NT seq
+upstream
nt +downstream
nt
atggatgctttcctacgtggacagagttcgactgctagttcttcgaagcttaagctacaa
acaggcgaagaaacggcaggatcttcaaacaaaagggttgttgttccatgggttgaaaaa
tatcgtccaagatctgtggatgaagttgcttatcaggatgaagttgtggcagtgttgaaa
aaatcactagaaggggttgatcttccaaacttactcttttatggccctcctggcacagga
aaaacatccacaatacttgctattgcaagacaactgtttggacctgaattgatgagatca
cgggtgcttgaacttaatgcatcagatgaacgtggaatacaggtggtaagagataaagta
aagaagtttgctcagctggcagcctctggtattcgtgctgatggtaaaccatgcccacct
tttaagctggttatcttggatgaagcagactccatgacaccgagtgctcaggcagccctg
agaagaactatggagaaggaaacaaaaactacaagattttgtctcatttgtaactacgta
agcaggattattgagcccctgacttcccgttgttccaaatttcgttttaagccattatct
acagatactttagagaaaagactcaacatgatttgtgaaaaggaagatgttaaatgtgat
agtaaggcgatacaagaactgataaagatatcagaaggtgacatgaggaaggctataaca
tacctacagagtgctcacagattgaaaggtgaagacatggtagaagctgatgatatcagt
gaaatagctggggttgttccaattaaaatggcagacaaactttttgaagcttgtgaatca
gactcatttgaaaagcttgatgctacagttcaggaaataatagctgagggacacgcagct
gctcaggtcattaaccaggttcacgacagaattattgaaatggctgagttaaatgaccat
caaaaatctgccattatggaaaaaatagctattgttgacaagtgtctttgtgatggagct
gatgaatatttacaaattttaagcttgtgttccgtcatgatgcaacaattttgccatgct
ggacagacatga
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integrated database retrieval system
