Stylophora pistillata (Smooth Cauliflower Coral): 111331915
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Entry
111331915 CDS
T05774
Name
(RefSeq) probable tRNA-splicing endonuclease subunit sen34
KO
K15323
tRNA-splicing endonuclease subunit Sen34 [EC:
4.6.1.16
]
Organism
spis
Stylophora pistillata (Smooth Cauliflower Coral)
Brite
KEGG Orthology (KO) [BR:
spis00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
spis03016
]
111331915
Enzymes [BR:
spis01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.16 tRNA-intron lyase
111331915
Transfer RNA biogenesis [BR:
spis03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing endonuclease complex
111331915
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TSEN34_N
tRNA_int_endo
Motif
Other DBs
NCBI-GeneID:
111331915
NCBI-ProteinID:
XP_022792870
LinkDB
All DBs
Position
Unknown
AA seq
366 aa
AA seq
DB search
MEDGDEESCVTLFSQFGKVFVWNPEDAKKIRVKYRIVGSLIGSLPRKPKQNHCFSLPLLL
SKAEATLLIDKGLATIFDLPENLPAPSNKEIETFNELRRDSAVKQIELFEREREEKQMEL
AEIIEEGRKRKRKLRETDKGITKPVKKVKSEDLDDNTPEEFCQKGEKVGNRLDTKWNIDN
GLTSNEETGNKTDCAEASLATSFIKNTENELGCKCKDKSCLQRVSPNCDINYEGKKSLSA
LGTLIHIPTIMPSQRLQALSAAHWTYPYTETEKLHYRVFLDLWSKGYYLTSGVKFGGDLL
AYPGDPMRYHSFYIVIIVPWGKKMTPFEMISAGRLGAAVKKTALICSVNGETDEILYTSI
KWSGIS
NT seq
1101 nt
NT seq
+upstream
nt +downstream
nt
atggaggatggcgatgaagaatcgtgtgtgactttattctctcaattcggtaaagttttc
gtttggaaccctgaggatgctaaaaaaattcgggttaaatatcgcatagttggatcactc
attggatcattacctcgcaaaccaaaacagaaccattgcttttctctgccgcttcttctt
tccaaagcagaggccacgctgcttatcgataagggattagcaacgatatttgatttgcct
gaaaatctcccagctccgtcgaataaagaaattgaaacgtttaatgagcttcgccgtgac
agcgctgtgaaacaaatagagttatttgaaagagagagagaggaaaagcagatggaatta
gcggaaattatcgaggagggaaggaaacggaaaagaaaactgagagagacagataaaggg
ataactaagccagtgaaaaaagtgaaaagtgaagatttagacgacaacactcctgaagaa
ttctgccaaaagggagaaaaagttggcaatcgtttggatacgaaatggaatattgacaat
ggtttgacaagtaatgaagaaacaggaaacaaaaccgattgcgctgaagccagtttagcc
acttcttttattaaaaacactgaaaatgaattgggatgtaaatgcaaggacaagtcttgc
ttgcagagagtgtcacctaactgtgatattaattatgaaggaaaaaagtctttgtcagcc
cttggaactttgattcacattccaacaattatgccatctcaaagactccaggctttatca
gctgcacattggacatacccctatacagaaactgaaaagctacattacagggtatttttg
gacttgtggtcaaaaggatattatttgacatctggtgttaaatttggaggagatttacta
gcgtatcctggtgatccaatgaggtatcactcattttacattgttataattgttccatgg
ggaaagaagatgactccatttgagatgatctcagcaggaagactgggtgctgctgtgaaa
aaaacagctcttatttgttctgtaaatggtgagacagatgagattttgtatacatccatc
aagtggagtgggattagttaa
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