Stylophora pistillata (Smooth Cauliflower Coral): 111332382
Help
Entry
111332382 CDS
T05774
Name
(RefSeq) ATP-dependent RNA helicase DDX55-like
KO
K14809
ATP-dependent RNA helicase DDX55/SPB4 [EC:
5.6.2.7
]
Organism
spis
Stylophora pistillata (Smooth Cauliflower Coral)
Brite
KEGG Orthology (KO) [BR:
spis00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
spis03009
]
111332382
Enzymes [BR:
spis01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
111332382
Ribosome biogenesis [BR:
spis03009
]
Eukaryotic type
Pre-60S particles
Helicases
111332382
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
CTT_SPB4
ResIII
AAA_22
Cas3-like_C_2
Helicase_C_2
AAA_19
UvrD-helicase
Motif
Other DBs
NCBI-GeneID:
111332382
NCBI-ProteinID:
XP_022793437
LinkDB
All DBs
Position
Unknown
AA seq
594 aa
AA seq
DB search
MATTWSELSPSLSNSVLDIMDKFGFQKMTPVQAATIPLFMSNKDVAVEAVTGSGKTLAFL
IPIVEMLLQREEKLKKHDVGAIIITPTRELAKQIDEVLRTFTEDLVQLKQLLLIGGVDPA
ENLQRFKSDGGHIIIGTPGRLEDLMTRKQEGLDLAAHVRSLEVLVLDEADRLLDLGFEDS
INTILGFLPKQRRTGLFSATQTDEVEALVRAGLRNPVRVTVREKYSNSKSDQRTPSTLKN
FYTTCESQVKFSRLVSFLKARKTCKNMVFFSTCACVNYFSKALERFLSNVKVLSIHGKMK
SKRHKVFDSFRKLKSGVLICTDVMARGVDIPEVDWVIQFDPPSSASAFVHRCGRTARIGN
QGNALLFLLPAEESYVEFISINQKVPLQSFEIEGEVTDVTPKLRQMAMKDRDVYEKGMKA
FVSFVQFYRKHECSLIFRSSDLELGKLATGFGLLKLPIMPELKDKRVDFEPVDVDVDKLY
YKDKNREKQRKRKLLESSETGSDPTSSKKKKFRKETVPWSKNKERKVKREKRKARREFLK
MQLQKHRYDEDELEDLARDALLVKKLKAGKISKEEVDSQLGNDEETALDLSELA
NT seq
1785 nt
NT seq
+upstream
nt +downstream
nt
atggcgaccacgtggagcgaacttagtccaagtttatccaattcagttttagatatcatg
gacaagtttggcttccaaaagatgacaccagtacaggcagccacaattccactgtttatg
tcaaacaaagatgttgcagttgaggcggttaccggatctggaaaaaccttggcttttttg
attccaatagtggaaatgctcctgcaaagggaagagaagttgaagaaacatgatgttggt
gccatcattatcactccaacaagagaacttgcaaaacagattgatgaagtcttaagaacg
tttacagaagatctcgttcagctaaagcagctacttctaataggaggagtggaccctgca
gaaaatttgcagagattcaaatcagatggaggccacataattattggcacaccagggaga
ttagaggatttaatgacaagaaagcaggaaggtttagatctggctgctcacgttcgatct
ctggaagttcttgtcttagatgaagctgacagactgttggacttgggttttgaagatagc
ataaatacaatcctgggtttccttccaaagcaaagaagaacaggccttttttctgcaact
cagacagatgaagttgaggctttagtgagagctggcttgagaaatcctgtcagagtaaca
gtgagagagaaatattccaactctaagtcagaccagaggacaccatccacactaaagaac
ttttacacaacttgtgaaagtcaagtaaagttctcaagattggtgtccttcctcaaggcg
agaaagacctgcaagaatatggtatttttcagcacatgtgcttgcgtcaactacttttca
aaggctctcgaaaggttcctttcgaatgtcaaagtgctgtctatccatggaaaaatgaag
tcaaagcggcataaagtatttgatagcttcagaaagcttaaaagtggtgttctgatctgc
accgacgtcatggcccgaggtgtggacattccagaggtggactgggtcatacagtttgat
ccacccagtagtgcaagtgcttttgttcaccgctgtggaagaacggcaagaattggaaat
caaggaaatgctctgctgtttttgcttcctgctgaagaatcttacgtggaatttatatcc
ataaaccaaaaggtccctcttcagtccttcgaaatagaaggtgaagtgacagatgtgaca
cccaagctaagacagatggccatgaaggacagggatgtgtacgaaaagggaatgaaggcc
tttgtttcattcgtacagttctacagaaagcacgagtgtagtttaatttttagatcaagt
gacctggagcttggaaaactggcaacgggatttggcctcctaaagttgcccatcatgcca
gagcttaaggataagagagtagattttgagccagtggatgtagatgttgataaactttat
tacaaggacaaaaacagagaaaagcaaagaaaaagaaagctgctggaatcgagcgagact
ggttctgatccaacaagttcgaagaaaaagaaattccgcaaagagaccgtcccgtggtct
aagaacaaagagagaaaggtcaaaagagagaagcggaaggcgcgcagagaatttctcaaa
atgcagctccagaaacataggtatgatgaagatgaacttgaagatcttgcgcgtgacgcg
ctcttagtgaaaaaactcaaggcgggaaagatcagtaaagaagaggtggattcgcaatta
ggaaatgacgaagaaacagctcttgatttgtcagaactagcgtaa
DBGET
integrated database retrieval system
