Stylophora pistillata (Smooth Cauliflower Coral): 111334532
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Entry
111334532 CDS
T05774
Name
(RefSeq) vam6/Vps39-like protein
KO
K20183
Vam6/Vps39-like protein vacuolar protein sorting-associated protein 39
Organism
spis
Stylophora pistillata (Smooth Cauliflower Coral)
Pathway
spis04140
Autophagy - animal
spis04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
spis00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
111334532
04148 Efferocytosis
111334532
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
spis04131
]
111334532
Membrane trafficking [BR:
spis04131
]
Endosome - Lysosome transport
Tethering complex
Hops complex
111334532
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps39_1
CNH
zf-Vps39_C
TPR_Vps41
Clathrin
TPR_CcmH_CycH
Motif
Other DBs
NCBI-GeneID:
111334532
NCBI-ProteinID:
XP_022796026
LinkDB
All DBs
Position
Unknown
AA seq
950 aa
AA seq
DB search
MHDAFEHAVILEKLPLQIECIATFGDNLLVGTRQGHLLLYGVLDGTGDSRFEVELRSSNK
LFSKKPISQVNYKIILVTTLCDAVMADCSRELIEINIHLFCGKSPLEKCCKAHQSRAAWT
MCYIGHYRNMRGLGKDSVVSVHNLETFAHKFTLHKTKGASVFAVNIKERKQSSVFDPSPA
LELKLCVSVKRKLQLFSWRNGEFQELEDLLVPDAAKALVWSKDSLCVGFKKEYSLIKTST
GAATELFSTGRHLEPTIATLPSGELILCRDDISIITDSEGKKTQKQTLTWTDTPTELGYA
EPYVIGLLPRYVEIRTISPRALIQSIELPKSRFIARGKHMYIASSSFVWRLIPVSIPMQI
QQLLQDKQFSLALMLADMVVEPEQEKAARKESIQNLYAFDMFCQKRFDDSLQLFAQLETD
PAQVIGLFPDLLPSEFRKLLEYPAPPPQLTPGELEKGCLALVEYLTQKRNELMKSSDKAE
SMQKGRLKDSAEDHSKADIKAQKNLMHKRQIIDTTLLKCYLQTNDALVAPLLRLKENFCH
VEECERVLMKSKKYNELVILYQTKGLHKKALDLLLRQAQKSSGPLKGHQKTVQYLQHLGR
EHLKLIFDFSVWVLKAHPDDGLKIFTEDLPEVEGLPRDKVLAHIEQCAKQLTIRYLEHII
FLCSESKPEFHNKLINCYRERVQVLMREYLDSLPEGDQPFPPGSEPGELGELRGRLLFLL
ETSKHYQAQHLLTHFPESFYHERALLLGRVGRHEEALAIYIHILHNIKLAEEYCHRNYNE
GREGSKDVYVSLLRMYLEPPQISGKENMKPNILEALDVLQEHHLKISTAKALELLPPSTK
VSEVYAFLLNVLEDKDRKRKSCQVLKSLLFAEHLQVQEQRMHYQGHKILLTDERACRVCH
KKIGTSAFAYYPTGEILHYYCCKNLTSPPNSEQTTPRDSPTLEDNMLQRY
NT seq
2853 nt
NT seq
+upstream
nt +downstream
nt
atgcacgatgcatttgaacatgcagttatcttggagaagctgccattgcaaatagaatgc
atagctacctttggtgacaatcttcttgttggaacaagacaggggcatttgcttttgtat
ggtgttttagatgggacaggtgacagcaggtttgaagtggagctacgaagctctaacaaa
ttgttctcaaagaagcccatttcacaggtaaattataaaataatattagtaacaacactc
tgtgatgctgttatggctgattgttctagggaacttattgaaataaatatccacttattt
tgtggcaaaagtccccttgaaaagtgttgtaaagcacatcagagcagagcagcatggaca
atgtgctacataggccattacagaaacatgagaggactgggaaaggattctgttgttagt
gttcataacttggagacctttgctcacaagttcaccttgcataaaacaaagggagctagt
gtttttgctgtgaatataaaggaaaggaaacaatcctcagtttttgatccttcaccagct
cttgaactaaagttatgtgtttcagtgaaacggaaactgcagttatttagttggaggaat
ggagaattccaagagctagaagatcttttggtgccagatgcagctaaggcattagtttgg
tcaaaggactctctctgtgttggcttcaaaaaagaatactctctcataaagacaagcact
ggtgctgcaacagagctgttctccactggtcgtcatttagagcctacaatagctactttg
ccaagtggagaacttattctttgtcgtgatgatatcagcattataactgacagtgaagga
aagaagacacagaaacaaaccctgacgtggacagatacaccaacagaactaggttatgcg
gaaccttatgtaatcggccttcttcctcggtatgtggagatacgaaccatcagtcctcgt
gcacttatccagagcattgaattacctaaatctcgatttattgctcggggaaagcacatg
tatatagcatcgtcaagctttgtgtggagacttattcctgtgtctattccgatgcaaata
caacagctactgcaagacaagcagtttagccttgctcttatgttagcggacatggtggtt
gaaccagagcaagagaaagccgcacgtaaagagagtattcagaatctttatgcatttgat
atgttctgtcagaagaggtttgatgattctttgcagctctttgcccagttagaaacagac
ccagcacaagttataggcctgtttcccgatcttcttccgagtgaattccgaaagcttctc
gagtacccggccccaccacctcagttgactccgggggagctggagaagggctgtttagca
ctcgtggaatatttgacgcagaaacgaaatgagttgatgaaaagcagtgacaaggcagaa
agcatgcagaaaggaagactgaaagattctgccgaagatcatagtaaagctgatataaag
gctcagaagaacttaatgcacaaaagacaaatcattgatactacactgctgaaatgttac
ttacagacaaacgatgcccttgtggcaccactgctgaggttgaaagaaaacttctgccat
gtagaagagtgcgaaagagttctaatgaagagcaaaaaatacaatgaattggttatactg
taccagaccaaaggtcttcataagaaagcactagacctcttgttgagacaggctcagaag
agtagcggtccactcaaaggccatcagaaaacagttcaatatctccagcatttaggtcgt
gaacacttaaaacttatatttgatttttccgtctgggttttaaaggcgcatcctgatgac
ggattaaagatatttacggaagatttaccagaggtcgaaggtctaccacgtgacaaagta
ctggctcacatagaacagtgcgcgaagcagttgactatcagatatttggaacatataatc
ttcctgtgtagtgaatcaaaacccgaatttcacaacaagttgatcaattgctaccgtgaa
agagtacaagtgttgatgagagagtatttagattcgttaccggaaggtgaccagcctttt
cctcccggaagtgaaccaggggaactcggagaactaagaggaaggttgctgtttttatta
gagacttcaaaacattatcaagcgcagcatctactgacgcactttccagagagcttttat
catgaacgagctcttttgcttggacgagtaggaaggcacgaggaagctctggctatatac
atccatattttacataacatcaaacttgctgaagagtattgtcatcgaaattataacgaa
ggccgcgagggcagtaaagatgtatacgtgtccttattgcgcatgtacctggagccaccc
cagataagcggcaaggaaaatatgaaaccgaacattcttgaggcgctagacgtactgcag
gagcatcacctgaagataagtaccgctaaggcgcttgaactacttcctccatctactaaa
gtgagtgaggtttatgcgtttttgctcaatgttctggaagacaaagataggaaacggaag
agttgtcaagtgttgaagagccttctgtttgctgagcatctacaggttcaagaacaacgt
atgcattatcaggggcataaaatactgctgaccgatgaaagagcttgtcgggtgtgtcac
aagaagatcggaacgagtgcctttgcatattaccccacgggcgaaatacttcattactac
tgctgcaagaacctcacttccccccctaacagtgagcaaacgaccccccgggacagccca
acccttgaagataatatgctacaaagatactga
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