Stylophora pistillata (Smooth Cauliflower Coral): 111335503
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Entry
111335503 CDS
T05774
Name
(RefSeq) PAN2-PAN3 deadenylation complex subunit pan3-like
KO
K12572
PAB-dependent poly(A)-specific ribonuclease subunit 3
Organism
spis
Stylophora pistillata (Smooth Cauliflower Coral)
Pathway
spis03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
spis00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
111335503
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spis03019
]
111335503
Messenger RNA biogenesis [BR:
spis03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
111335503
mRNA degradation factors
3'-5' decay
Pan complex
111335503
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pan3_PK
zf-CCCH
zf-CCCH_2
zf_CCCH_4
Torus
Pkinase
zf-CCCH_4
zf-CCCH_9
Motif
Other DBs
NCBI-GeneID:
111335503
NCBI-ProteinID:
XP_022797151
LinkDB
All DBs
Position
Unknown
AA seq
683 aa
AA seq
DB search
MNHSNSTTGYRPSRPMLCRYYNTNGYCFYGDQCQFVHAKPSSNEGRVGPANNGHPINNGP
VMNNGPIGPKGLRSGGFKSNTAGLHHNLVGNMAQLSISTNKMPPGSLGGHLSPLSPSKKA
FASSLAPGGPVSPVHSPSKPPLGSPKAHHNPVTSQAFEFLPSAANQNLPQPSIHNQAHVP
APQQMESIGGTTYFYTQQGQQQPAVLFPSYQAYMSEPSHLAHLHSTQTRNNAFSMSTQIR
QELIHQHTLSMAQLDPDDNTVPQEVDSYHTLCPIEALDTPTEQAQRTFGYMTTCYKATNS
KDGLIYILRRIHSFRLVNTKSMFLVDQWKKVSHSNLVSLREVFTTKSFGDNSLVFVYDYH
PGAETLLMRHFSGPDSNLPVNPDGALVFPSHPRAGGMPNRHRSGHRSPMPERLIWSYIIQ
LSSALRTVHASGLACRVIDPSKILLIGNSRLRINGCGIFDVLSFDASNSPNAMIPHFQQE
DLTSLGKLVLALACYSLQAVQREHIQQSLEYMAMNYSSDLKNLILYLLSSPVPAAHMKTV
NDIMPMIGARFYTQLDAAQVKCDVLEGELAKEMENGRLFRILCKIGIINERPEFTMDPSW
SETGDRYLLKLFRDYLFHQVTENGAPWVDLAHIVACLNKLEAGTSEKVCLMSRDEQSVLV
VSYRDLKQCFEGAFGEIISASLA
NT seq
2052 nt
NT seq
+upstream
nt +downstream
nt
atgaatcattcaaactcaacgactggttacagaccctcaaggcccatgttatgtcgctat
tacaatacaaatggttattgtttctacggcgatcagtgccagtttgttcatgcgaagcct
tcctccaacgaaggtcgagtgggacctgcgaataatggacatcctattaataatggtccc
gtaatgaacaatggacctattggtcccaaggggctgagaagtggagggttcaagagtaac
acagctggtcttcatcataacttagttggcaacatggcacagttgtcgatatcaacaaat
aagatgcctccaggttcccttggtgggcatctttctcctctttccccatcaaagaaagca
tttgcatcatccctggcacctggaggccctgtctcaccagtgcattcccctagcaagcca
ccgcttggatcaccaaaagcacatcacaatccagtcacatcacaagcatttgaattttta
ccatctgctgcgaaccaaaatctcccccagccatcaatacataaccaggcgcatgttcca
gctcctcagcagatggaatccattggtggaacaacctacttttacactcaacaaggacaa
cagcagcctgctgtgctttttccatcgtaccaggcatatatgtcagagccatctcacctt
gcacatcttcacagcactcaaacacggaacaatgctttctccatgtcaactcagattcga
caagaactcattcaccaacatactctgagtatggcacagcttgacccagatgataacact
gtgccacaggaggttgacagttaccacaccctgtgtccaatagaagccttggacacccca
actgaacaggcacaaaggacatttggttatatgactacttgctacaaagccacaaattct
aaagatggacttatttacatacttagaagaatacactcttttcgacttgtgaataccaaa
tccatgtttcttgtggatcaatggaagaaagtcagccactccaacctcgtcagtctcaga
gaagtctttacgacaaagtcttttggagataactcgctcgtcttcgtatacgactaccat
cctggagccgaaacactccttatgaggcatttttcgggtccagactcgaatcttcccgtg
aatcccgatggtgcattagtctttccctcgcatcctcgtgccggtggaatgccaaacaga
caccggtctggtcaccgtagtccaatgcctgaacggcttatttggagttacattattcag
ctgtcttctgcactgagaactgtgcatgcatctggactggcctgtagagtgattgatcct
tccaagattttattaattggaaattcaagattaagaataaatggctgtgggatatttgat
gttctcagttttgacgcaagtaacagtccaaatgctatgattccacattttcagcaagag
gatcttacttcccttggtaagcttgtccttgccttggcgtgttattctcttcaagctgtc
caacgtgaacacattcaacagtcattggaatacatggctatgaactactcgtcagatctt
aaaaatcttattctataccttctcagcagtcctgtgccagcagctcacatgaagaccgtg
aatgacattatgccgatgattggagccagattttatacacaactggacgctgcgcaagtc
aagtgcgatgttttagagggcgaactggctaaggaaatggagaacggccgccttttcaga
atcctctgcaagattggaatcatcaatgaacggccagagttcaccatggatccaagttgg
tcggagactggtgaccgatatcttttgaagctgtttagagactatttgttccaccaagta
actgaaaatggtgcaccatgggtagacttggctcatatagttgcctgtctgaacaagctg
gaagcggggacatctgagaaagtttgtctaatgtcccgagacgaacaatccgtgttggtt
gtttcatatcgtgatctgaagcagtgcttcgaaggcgcttttggtgaaataatctctgct
tctctggcgtaa
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integrated database retrieval system
