KEGG   Stylophora pistillata (Smooth Cauliflower Coral): 111336662
Entry
111336662         CDS       T05774                                 
Name
(RefSeq) collagen alpha-1(I) chain-like
  KO
K19719  collagen type II alpha
Organism
spis  Stylophora pistillata (Smooth Cauliflower Coral)
Pathway
spis04512  ECM-receptor interaction
spis04518  Integrin signaling
Brite
KEGG Orthology (KO) [BR:spis00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    111336662
   04518 Integrin signaling
    111336662
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   00536 Glycosaminoglycan binding proteins [BR:spis00536]
    111336662
Glycosaminoglycan binding proteins [BR:spis00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   111336662
SSDB
Motif
Pfam: Collagen COLFI
Other DBs
NCBI-GeneID: 111336662
NCBI-ProteinID: XP_022798522
LinkDB
Position
Unknown
AA seq 1424 aa
MITRFSMLLWLCCSASWVIGTFSERNIKKNSHRIRRQTDVTDGDGDQQIINVIGEPGDAG
AGGERGPPGFIGPQGTRGPRGSRGPQGNKGQQGITGPPGLPGPPGPPANTLYESIPGEKG
PAIRPILVTTAAIKMKEIRGDPGPKGLPGSRGMMGITGEPGRTGEMGVNGERGDPGGPGL
PGLDGTPGLRGKPGKRGFRGMKGYQGAIGDSGHDGVQGRDGHRGRRGTPGPKGFRGGDGD
EGSVGPDGNQGVDGEQGDPGPHGKQGTVGFPGDLGSQGNPGAEGDIGLEGSKGVAGPPGL
PGPTGEVGSTGQVGEKGPLGYQGERGSRGSPGVQGPPGNSGDDGIQGGPGFKGRQGEVGI
TGLEGNQGLSGERGIPGEAGPTGGDGPPGNYGEPGARGGPGDKGTTGRHGAPGSLGLPGV
RGLKGKQGHPGAQGQSGREGDQGIPGGRGMTGKDGSPGVMGPIGHRGNRGERGTKGTKGG
EGRTGSEGSPGRSGPRGRQGKLGRGGTPGIPGELGDNGRPGRQGEAGSAGALGLMGLTGK
KGQRGPQGKPGTPGLSNKSGPKGNRGTAGEPGKVGVPGPMGRAGSGGETGEQGLPGDMGE
TGSEGIQGEKGQRGSMGLKGDRGENGILGREGNAGISGMNGEAGDMGSVGPQGVQGNIGR
PGNMGSPGPMGAIGQDGSQGPRGAVGATGPVGEPGVKGDTGPAGLNGRPGQSGSRGQKGA
SGENGKRGASGPEGNMGHPGDNGLPGLHATEGETGKKGEAGIKGLTGYRGQAGPVGEMGL
QGPRGLKGAQGPNGDEGRIGERGEEGKQGIAGPVGAKGEVGDRGEQGLGGAPGDIGNNGE
PGIPGEAGSEGSLGELGQSGIEGLNGDTGPKGSRGTKGFSGSTGLTGNPGEPGQTGAQGP
AGPPGVDGPSGRKGPIGLVGKRGAAGQTGGEGPKGERGEPGSDGEDGTRGRKGSIGLPGK
NGKRGENADEGPLGLKGPTGLPGEPGEKGPPGASGSIGASGLQGVKGMSGARGDQGATGR
FGEDGPHGATGDLGLPGKQGDKGDFGELGDVGTKGRAGDKGSRGVRGAKGPMGSKGAQGP
LGEPGLPGPIGPAGLEGADGIRGSQGSPGLQGIFGPPGSQGGFGNKGDAGPQGPDGLQGP
PGPPGEPGQAADISGLISQQRYGFLEESLTQSNGKSSLYRSNLPRQKPETDSKRFQEVNS
RVIEAISNQVQSLITCRRFLGTRRHPARTCRDLKQLEPNVTNGHFWIDPNDGPADDAIQV
YCDFHLNATCIHPKKGKTENKKWFFGPDGYKWFAKEFDDLPQFVYDCDPIQLTFLRLLSN
RAKQIITYHCLNSSAWFKQSTGNYEYSIKLKAENGIEIHAQGTKKYKPTILLDEWKIKDG
TWRRTILEVNTSKTHRLPINDVAVHDVGDAGEEFGLEIGPVCFS
NT seq 4275 nt   +upstreamnt  +downstreamnt
atgatcacaaggttctcaatgttactgtggctctgctgttctgcttcttgggtaattgga
acgttcagtgaaagaaacatcaagaaaaactcgcacaggataaggcggcaaacagacgtc
actgatggagatggggaccaacagattatcaatgtcattggggaaccaggagatgctgga
gccggaggagaacggggcccacctggattcattggacctcaagggacacgtggaccgaga
ggatcacggggtccccaagggaacaagggtcagcagggtatcacaggacctcccggtctt
ccgggtccacctggacccccggcaaacacgctgtacgagtcaataccaggtgaaaaggga
cctgccattcgaccaatccttgtaacaacagctgccataaaaatgaaggaaattagaggg
gatcctggacccaaaggtcttccaggctcaaggggcatgatgggtattacaggcgagccg
gggagaactggtgaaatgggcgtcaatggagaacgaggagatcctggtggacccggtctg
cccggattggatggcactccaggcttgagaggaaaacctggcaagcgaggctttcgtgga
atgaaaggatatcagggtgctattggcgactccggacatgatggagtccagggtcgagat
ggtcaccgaggaaggcgcggtacaccaggtcctaagggtttccgtggtggcgacggagac
gagggatccgttggaccagacgggaatcaaggagtggacggtgaacagggagatcctgga
ccccatggaaaacaaggaactgtgggattccctggtgaccttggaagtcaaggtaacccg
ggagctgaaggagacatagggcttgaaggatctaaaggagtagcagggcctcctggtctc
ccaggccccacaggagaagtagggtctacgggacaagtgggtgaaaagggaccccttgga
tatcagggggaaagaggctctaggggctcccctggagttcaggggcccccagggaacagt
ggagatgatggcatccagggtggtccaggcttcaaaggaagacagggtgaagttggtatc
actggacttgaaggcaatcaaggtctttccggagaaaggggaatccctggagaggcaggg
ccaactggaggggatggtccaccgggtaactacggagaacctggagcgcgcggaggacct
ggggataaaggaacaacaggtcggcacggagctcctgggagtcttggtttgccaggagta
cgtggactaaagggaaaacaaggccatcctggagcacagggccagtctggtcgtgaagga
gatcaaggaatacctggtgggcgtggcatgactggaaaagatggatcccctggtgttatg
ggccccattggtcaccgaggaaacagaggagagcgcggcactaagggaaccaaaggtgga
gaaggacggacaggatctgaaggatcgcccggtcgttctggcccccgagggcggcaaggt
aagctgggcagaggaggaacgcctggaatccctggagaacttggagacaatggtcggcct
ggcagacaaggggaggctggttcggctggtgcgctaggactcatgggattgacagggaaa
aaaggacaacggggtcctcaaggaaaacctggaacacctggtttgtccaacaaaagtggc
ccaaagggaaacaggggtacagctggggagccaggcaaagtaggagtccctggaccgatg
ggtcgagcgggatctggtggtgaaacaggagaacaggggcttcctggtgacatgggtgaa
acaggttctgagggcatccaaggagaaaagggtcaacggggcagcatgggtttaaaaggt
gatcgaggagaaaacggtatcctaggaagagagggaaatgctggtatttctgggatgaat
ggagaagcaggagacatgggcagtgtgggaccacaaggcgtgcaaggaaatattggcaga
ccaggaaatatgggatcgcccggacccatgggggcaataggacaagacggaagccaaggt
ccacggggtgcagtgggagccacaggtcctgtgggagagcctggagtcaaaggggacacg
ggacctgcaggtctgaatggtagacctggccaatcaggatcgagaggacaaaagggagcg
agtggagaaaatggaaagcgaggagcaagtggtccagaaggaaacatgggacatccaggt
gacaatggtctgcctggacttcacgccactgagggagaaacgggcaagaaaggagaggct
gggattaagggtcttacgggatacagaggtcaagcgggtcctgtaggagagatgggtctt
caggggccaagaggtctcaaaggagcccagggtccgaacggagatgaagggaggattgga
gaaagaggagaggaaggaaaacagggaattgcaggtcctgtgggtgctaagggagaagtt
ggagatagaggtgaacagggtttggggggagcacccggtgacataggaaataatggagag
cctggaataccgggagaagctggatctgagggatctcttggcgaactaggacaaagtggc
attgagggactcaacggtgacactggacctaaaggttctcgaggcacaaaaggattttca
ggctccactggcttaactggaaaccctggtgagccaggacaaactggggctcagggccct
gctggaccaccaggcgtagatggaccttctggcagaaaaggaccaatcggactagttggt
aaacgcggagccgcaggacaaactggcggagagggaccgaagggtgaaagaggggaacca
ggtagtgatggtgaagatggcacaagggggagaaagggcagcattggacttcccggaaag
aacgggaaaagaggagaaaatgcagatgaaggtcccctcggtttaaaggggccaactgga
ttgcctggggaacctggtgaaaagggtcctcctggggcatctggttcaataggtgcctcc
ggtcttcaaggagtcaaaggaatgtcgggagctcgtggagatcaaggagccacaggacgt
tttggggaagatggtccccacggagccaccggtgatctagggttaccgggaaaacaaggg
gacaagggcgattttggcgagttaggagatgttggaactaaaggaagagcaggggataag
ggaagtagaggagtcagaggtgcgaaaggtcccatgggatctaagggtgcacagggtcct
ttaggtgagcctggtctcccaggaccgattggacctgctgggttagagggagctgacggc
atcagagggagccagggatcccctggattacaaggaattttcggaccacctggctcacaa
ggaggctttggaaacaaaggtgatgctggaccacagggaccggatggacttcagggtccc
ccaggacctcccggtgaaccaggacaggcggcagatatttccggcttgatttcccaacag
agatatggatttcttgaagagtctcttactcagagtaacggaaagtcctctctgtacaga
agtaatttgccacgacagaagccagaaactgactccaaacgattccaagaggtcaacagt
cgagttatcgaagccataagcaatcaagtccagtccttaataacctgcagacgatttcta
ggtaccaggcgccacccagccaggacatgccgagacctgaagcaacttgagcctaatgtt
actaatggtcacttctggatcgatcccaacgatgggccagcggatgatgcaatccaggtt
tattgcgattttcacttgaacgcaacatgcattcacccaaaaaagggcaagactgaaaac
aagaaatggttctttggacctgacggatacaagtggtttgctaaagaatttgatgatctc
ccacagtttgtttatgactgcgacccaattcaactgacatttcttcggctgctaagcaac
cgcgcaaaacagatcatcacctatcattgtttaaactcctctgcctggttcaagcaaagt
acagggaactatgaatattccataaagcttaaagcagaaaatggaatagagattcatgct
cagggaaccaagaaatacaaacctaccatacttcttgacgaatggaagattaaagatggt
acatggcgtagaacaatcttggaggttaatacttccaaaactcacagactcccaattaac
gacgtggcagtgcatgatgttggagatgctggagaagagtttggtctggaaattggtcct
gtgtgtttctcgtga

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