Stylophora pistillata (Smooth Cauliflower Coral): 111336788
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Entry
111336788 CDS
T05774
Name
(RefSeq) pre-mRNA-splicing factor RBM22-like
KO
K12872
pre-mRNA-splicing factor RBM22/SLT11
Organism
spis
Stylophora pistillata (Smooth Cauliflower Coral)
Pathway
spis03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
spis00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
111336788
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
spis03041
]
111336788
Spliceosome [BR:
spis03041
]
Complex B
Other components
Prp19-related factors
111336788
Complex C
111336788
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
STL11_N
zf-CCCH_RBM22
RRM_1
zf_CCCH_4
Torus
zf-CCCH_2
zf-CCCH_4
zf-CCCH
Nup35_RRM_2
RRM_YTH1
RRM_occluded
zf-CCCH_PARP12
zf-CCCH_DUS3L
zf-CCCH_10
RRM_PARP14_3
Motif
Other DBs
NCBI-GeneID:
111336788
NCBI-ProteinID:
XP_022798685
LinkDB
All DBs
Position
Unknown
AA seq
465 aa
AA seq
DB search
MATSKSANTYNRQNWENAEFPILCQTCLGDNPYVRMTRETYGRECKICARPFTVFRWCPG
ARMRFKKTEVCQTCSKLKNVCQTCLLDLEYGLPVQVRDHALGMKDDVPKSDVNKEYYTQN
VEKELANSDGTTPGGTLGKANAPSDLLLKLARTTPYYKRNRPHICSFWVKGECKRGDECP
YRHDMPTDPNDPLADQNIKDRYYGMSDPVATRLLKQASSMPSLEPPSDKSITTLYVGGLE
GKVEESDLRDYFYQFGELRSITMVPRQNCAFVCFTARASAETAAERSFNKLILKGRRLKI
MWGKSQGQQPAPGKQGGTSLAPVPGLPGALPPPPTDEKSQANFFNLPPSSAPPAALPSIP
PPLPPPPGGLPGIALPPMGHSLPPPPGGYPPPPPPFGHPPFRPPPMPFYGAPHPPHMPLP
PRHGMPRPPPGPPPIHYPSQDPHRLGAGKSGEGGTRPPAPAAASS
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atggcgacctcaaagagtgcgaatacatacaatcgtcaaaattgggaaaacgcggagttt
cccattctttgtcaaacatgccttggcgataatccttatgtgcgaatgacaagggaaaca
tatggcagagaatgtaagatttgtgcccgaccattcacagtttttcgttggtgtccagga
gcacgaatgagatttaagaagacagaagtctgtcagacatgttcaaagctaaagaatgtt
tgccaaacttgtttacttgatcttgaatatggtttaccagtacaagtcagggaccatgcc
cttggtatgaaagacgatgttcctaaatctgatgttaataaagagtattacactcagaat
gtagagaaagagttggcaaattcagatggtaccacacctggtggaactctgggtaaagcc
aatgcacccagtgacttgctactgaaactggctaggaccacaccttattacaaaaggaac
agaccccacatctgttcattctgggtaaagggagagtgtaagcgtggagatgaatgccca
tatagacatgacatgccgacagaccctaatgaccctctagctgatcaaaatataaaggat
agatactatggaatgagtgatcctgtagcaactcgcttactaaaacaggcatcctcaatg
ccgtcccttgagcctccttctgacaagtccatcactactttatacgttggaggattagag
ggaaaggtggaagaaagtgatttgagggactacttttaccagtttggtgagcttcgatcc
ataactatggttccgagacaaaattgtgcatttgtctgtttcactgcacgagcatcagca
gaaacagcagcagagcgctcttttaacaaactcatccttaaagggcggcgactgaaaatc
atgtggggaaagtcacaaggacagcaacctgcccctggaaagcaaggaggcacttctcta
gccccagtgccgggactgcccggagctcttccaccacctcctacagatgagaaaagccaa
gcaaactttttcaaccttcctccatcctcagcaccaccagctgctctcccctctataccg
ccccccttacctcctcctcctggggggctaccaggcatcgctcttcctccaatggggcat
tctttacctccaccaccaggtggctacccacctcctcctcctccatttggtcatccacca
ttcagaccaccccccatgcctttttatggggcaccacacccacctcacatgcctctgcct
cctagacatggaatgccacgccctccacctggtcctcctccaatacactatccatctcag
gatcctcatcgtctgggtgcagggaagagtggggaaggaggtactcgtccaccagcccct
gcagctgcaagctcttag
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