Stylophora pistillata (Smooth Cauliflower Coral): 111337334
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Entry
111337334 CDS
T05774
Name
(RefSeq) pre-mRNA 3'-end-processing factor FIP1-like
KO
K14405
pre-mRNA 3'-end-processing factor FIP1
Organism
spis
Stylophora pistillata (Smooth Cauliflower Coral)
Pathway
spis03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
spis00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
111337334
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spis03019
]
111337334
Messenger RNA biogenesis [BR:
spis03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
111337334
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Fip1
Motif
Other DBs
NCBI-GeneID:
111337334
NCBI-ProteinID:
XP_022799348
LinkDB
All DBs
Position
Unknown
AA seq
625 aa
AA seq
DB search
MADAEDDEKFLYGGGDAQEKEETLSTEIKQEPKEEEEITENGQVKDEDDAKEAGELSNED
EEDDDDDDDDDDDDVQVTIGEINTSAAPYGAPYAAPVNWNFKTGGGSAAVKDTKDNKHID
VDAVGTVNGVSVHEFDLDSVDDKPWRKPGADITDYFNYGFTEDTWKQYCEKQRRMRMELQ
MPKKIFMHPPATVDPAMLPDGRPRKAGPPPERKLEGSIDVIGGEGSRVESRRRREDDVMM
PMMEEGMNPDVAARQGMMNKRHFPPGPPGGPHGMPPVSGAPPFIPPHPDPSMGPPTSGAP
HGIPMHMPPGGPIPPGMPPPFRPMGPDGRHHPEGAPPGMPPPGMPPMPGMAGPPPHGFPP
EMGLPPDGMPPPFDPGFPGRPGAMSMRGRGRGRIPVGGPPGVPPGMPPPGEFPQGIDERG
PRPFEEGAAFFPGDPTQAFHPMMGHPPGMPWDAGIGRGFPPGFREGFPGTMARQGSESPG
DDDSEFGSSDEDRKRDRDSHRRRDRDKDRSREHRERNRDRDRSPRKERDRDRDRRDRDRR
HRDRDKGDRERREERSSRKDKDREKSKEQREKKRHSKTAGSETSGGPEEGELVSSKKKSR
RTREAKEAKSENSEPREEGQRTPTP
NT seq
1878 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgccgaagacgatgagaagtttttatatggaggtggtgatgcacaggaaaag
gaagaaacattaagcactgaaataaaacaagaaccaaaagaagaagaggaaattactgag
aatggacaagtcaaagacgaagatgatgccaaggaggctggagagctgagtaatgaagat
gaagaggacgatgacgatgatgatgacgatgatgatgacgacgttcaagtcactattggg
gaaataaatacgtcagcagcaccatatggagctccatatgcggcacctgtaaactggaat
ttcaagacaggaggtggatctgccgcagtaaaggacacaaaagacaataaacacattgat
gtggatgccgttggaacagtcaatggagtttctgtgcatgaatttgatttggactcagtt
gatgacaaaccttggagaaagcctggtgctgacatcactgactacttcaactatggcttc
acggaagacacgtggaaacaatactgtgaaaaacagaggcgaatgagaatggagttacaa
atgccaaagaaaatatttatgcacccgccagccacagtggatccagccatgctgcctgat
gggagacccagaaaagcaggcccaccccctgaaagaaaactggaaggaagcattgatgtc
attggcggagagggctccagagtggaaagtcgccggagacgcgaagatgacgtcatgatg
ccgatgatggaagagggtatgaacccggatgtggcggctcgacaggggatgatgaacaaa
agacacttccctccaggtccgccaggaggtccccatggtatgcctccggtgtcaggagcc
ccgccatttatcccccctcacccggacccctccatgggtcctccaacatctggagcacca
catggtatacctatgcatatgccacccggaggtcccattccacccggaatgccccctccc
ttcagacccatgggtccagatggacgacaccaccccgagggggcacctccgggtatgccg
cccccgggtatgccccctatgcccggcatggcaggtccgccgccccacggatttccgcct
gagatgggattacctccagacgggatgccgccgccatttgacccagggtttccaggtcgt
ccaggtgcaatgagcatgcgtggtagaggtcgtggaagaataccggtaggaggaccccca
ggggtaccaccgggaatgcctccacccggggaatttccgcaaggaatagacgaaagggga
ccaagaccgtttgaagaaggcgcggcgttcttcccaggagatccaacgcaagcttttcat
ccaatgatgggacatcctcctggcatgccgtgggacgctggcataggtcgcgggtttcct
ccgggattccgcgagggattcccgggtaccatggccaggcaaggcagcgagagtcctgga
gacgacgatagcgagtttggcagtagtgatgaagataggaaacgcgatcgtgattcacat
agacgccgagacagagataaggacagaagccgtgaacacagagaaagaaatcgtgaccgt
gatcgttctccgcgtaaagagcgtgatcgtgaccgagataggcgtgaccgagatagaaga
caccgtgaccgtgataaaggagacagagaaagacgtgaggaacgttcatcgcgaaaagat
aaagatagagaaaaatcaaaagaacaacgagaaaaaaaaaggcacagtaaaacggctggg
tctgaaacttccggcggcccggaagagggagaactggtgtcgagcaagaagaagagtaga
agaacccgggaggcgaaagaagctaagagcgaaaactctgagccgcgagaggagggtcag
cggacacctacaccatga
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