Stylophora pistillata (Smooth Cauliflower Coral): 111337721
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Entry
111337721 CDS
T05774
Name
(RefSeq) enhancer of mRNA-decapping protein 4-like isoform X1
KO
K12616
enhancer of mRNA-decapping protein 4
Organism
spis
Stylophora pistillata (Smooth Cauliflower Coral)
Pathway
spis03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
spis00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
111337721
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spis03019
]
111337721
Messenger RNA biogenesis [BR:
spis03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
111337721
mRNA degradation factors
5'-3' decay
Decapping complex
111337721
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ge1_WD40
EDC4_C
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EDC4L
Beta-prop_EML_2
EIF3I
WDR55
Beta-prop_TEP1_2nd
ANAPC4_WD40
WDR90_beta-prop_4th
DUF445
Motif
Other DBs
NCBI-GeneID:
111337721
NCBI-ProteinID:
XP_022799802
LinkDB
All DBs
Position
Unknown
AA seq
1398 aa
AA seq
DB search
MDDNAKGMASKILCDLLNIGGTETSNGNSLQTQRNGERDLDDSLSESASTASSLSPQRRG
NSKDQMSDVSVSDSEGVASRMSLEPVKQVIEMKGSDDGSSKSVYGNEVEIVTGEAAVSTS
ATASNKIKFNSMVNYDWELKYYRGCLIAVSSKCIAYALRGRHGYVVRLLNPETASRTLIK
GFVGTISELAFSHKDSNMLACVDEGGNVYIWVIHEEDGKLEYSVKLHIKRPSSTLSEHHR
LIWTPYMPDAEELERTEESAAEEGRPLAITHGNQVEVIDVDSLTEWCGRSEVTIDDIKQG
AGYLEITDGHAMPITEGALSPDGAVLATASEDGYIRFWQLTDNVECMHDFQPHGGHPVSC
MIFTDNQTSQDKELPMWRFLITGADYNREIKVWCTVTWSCLQTIRFSSPDIPGSSSIRSY
LKVGMDLSASYLVISDVLKKVIYVLMFHQNFDEGQAHVTSVANFHLTHPLLSFIVGQVKL
FKLKSQGELNGEDNGESHDHDDDDIHSSHVGLKEITAGEEKGKKYGVQLQLFCIQTRSMQ
ELLVHFQPEPSVPQPTPSTLSSLTTVAGQSVIHDALSDLSGVETGTEASTDVEEPEESTD
GPVPVRTKLITPQAFESTVSQGSPHPEAVNSSSGSSITMISGLNNSQASVDELLGSSVSS
RLSDSTVKSSNSATPQGSFSHENGILTPTSLHLPQSPVTLTPNPSAIPILNFQSSPQMAS
VQNTQSPISSFEPLVAITNTETQASPYTLGEKAENVLNDSKSPSEQNRSHSPGSKERNIE
VSVDDDARDEGEEELPESQKPEAETLEEENQRDRKSSSGSSTSESLRPLSARAEGNLICL
DDDKRGIGDDVQVDGEDAFTEEGLLDQWDMNGDDGVVPTGRESPESAHALPVGTPTGYNE
GRKQPSALSSFVSTPVSTTDLPPQQAKVTMDGGVLSSLEELLSLVKAQQQDICDLRKQLK
TYQSDQQQEMITVVNEVHQVEERVSSKLQTTLDDFFREESQRLDKALRDKHSGDKKRHEQ
LQSTLSQTITTTLSGKLDKSVKAEIKSAVVPAVQKVLSAMQEQLNTALAQKLTAADTVLK
DSIGKIVKSKGVVDAIGTAAASALQGPIQVTYREAFQSSILPSFERACQNMFQQINDSFH
KGTQQYLQQVTTALDNRKREEKHSFEPVMRQLESQKQSFQAITERLSSNLMADFEVMIQK
QLSSSIEGLREEIFSRLLSEVLASVQDSVQKEMGLGLEGLRQQLKDMITASVVNTSQQSP
TTAHTRVVVSKLLESGQVGQAFQEALTVGDLNIVMYVCENVDPEKLSSQSPCPLSQPVLL
SLIQQLSVDLTMYTDLKHKYIEVALMALDTRDAVTREHMPGVIEGLCQQLQAAIDEASGP
IQRSLKMLQMAARSLLVR
NT seq
4197 nt
NT seq
+upstream
nt +downstream
nt
atggacgataatgctaaagggatggcttcaaaaatactctgtgacttgctgaacattgga
ggtactgaaacgagtaatgggaatagtttacagactcaaagaaatggagagagagacctc
gatgattctctgagtgaatcagcatccacagcaagttctctttctcctcaaagaagggga
aactcaaaggatcagatgtctgatgtgtctgtctcagatagtgaaggtgtagcttcaaga
atgtcccttgaacctgtcaaacaagtcattgagatgaaaggtagtgatgatggaagcagt
aaatcagtatatggaaatgaagttgaaattgtaactggtgaagcagctgtttcaacaagt
gccacagctagtaataagataaaatttaattccatggttaattatgactgggagctgaag
tactacagaggatgtttaatagctgtgagcagcaaatgcattgcttatgctcttagaggc
cgtcatggctatgttgtgaggcttcttaaccctgagacagcctctagaacactgatcaag
gggtttgttggtacaattagtgagttagcattttcacacaaggactctaatatgctggca
tgtgtagatgagggaggtaatgtttatatctgggttatccatgaagaagatgggaaactt
gaatactctgtgaaacttcacatcaaacgtccttccagtacgctttctgagcaccacaga
ctgatatggactccgtacatgcctgatgctgaagagctggaaagaactgaagagtctgct
gctgaggaaggccgcccactggccattacacatggaaatcaggtggaggtaatagatgtt
gattctttgactgaatggtgtggcaggtcagaagtgactattgatgatataaaacaagga
gcaggatatttagaaatcacagatggacatgcaatgccaatcacagaaggtgctctttca
cctgatggtgcagtattagcaactgccagtgaagatggttacatcaggttctggcagttg
acagacaatgttgagtgcatgcatgacttccagcctcatggtggacatcccgtgtcatgt
atgatttttactgataatcagacctcacaagataaagagctgccaatgtggagattttta
atcacaggtgctgattataacagagagataaaagtctggtgcacagtaacatggtcatgt
ttacaaacaatcagattttcttctccagatattccaggatcaagctccattcgctcatac
ttgaaagtaggcatggacctttcagcctcctatttggtaatttcagatgtcctcaaaaag
gttatttatgtactgatgttccaccaaaattttgatgaaggccaagcgcacgtcacgtct
gtggccaactttcatctcacacatccccttctaagttttattgttggccaagtgaagttg
ttcaaactcaagtcacaaggggagctgaatggtgaggacaatggtgaaagccatgatcat
gatgatgatgatattcactcctcacatgttggacttaaagaaataactgctggagaagag
aaagggaaaaagtatggtgttcaactgcagctcttttgcattcaaacaagatcaatgcaa
gaactcttggttcacttccaaccagagccgtctgttcctcaacctactccatcaactctt
tcgtctcttactacagtagccgggcagtctgttatccatgatgcactctctgacttaagt
ggtgtggaaacaggaacagaagcaagtacagatgttgaagagcctgaggagagtacagat
ggacctgttccagtcagaactaaactaataacaccgcaggcctttgaaagcactgtgtca
caggggtcaccccaccctgaagctgtaaatagcagcagtggtagcagtattacaatgatc
tctgggctgaataactcacaagcatcagttgatgagcttctgggctcatctgtgtcatca
aggctgtctgactctactgtcaaatcaagcaactcagcaacacctcaaggatctttctct
catgagaatggtattctaacaccgacgtccttgcacctgccccagtcacctgtaacacta
acacccaaccctagtgcaatacccattttaaacttccagtctagtccacaaatggcatca
gttcaaaacacacaaagtccaatatcaagttttgaacctttggtagctattacaaatact
gaaactcaagcttcaccatatacactgggagagaaagctgagaacgttttgaatgattca
aagagtccatctgaacagaacagatcacacagtcctggcagtaaggaaagaaacattgaa
gtatctgttgatgatgatgctagggatgaaggtgaagaagaattaccagagtcccagaaa
cccgaggcagaaacgctagaggaggaaaatcaaagagacagaaaatcaagttctggatcc
agtacaagcgaaagtttgagacctttgtctgcccgtgcagagggaaatcttatttgtttg
gatgatgataagaggggtataggagatgatgtgcaggtagatggggaggatgcattcaca
gaggaaggacttttggaccagtgggatatgaatggtgatgatggagtggtaccaactgga
cgggagagtcctgagtcagcacatgcactgccagttggtacaccaacaggctacaatgag
ggtagaaaacaaccgtcagcactgtcaagttttgtttctactcctgtaagtacaacagat
cttcctcctcagcaggccaaggttacaatggatggtggtgttttgtcatcactggaagag
cttctgagtttggtcaaagctcaacagcaagatatctgtgaccttcgtaagcagctgaaa
acataccagtctgatcagcagcaggagatgattacagtggtcaatgaagtacatcaggtt
gaggagcgggtctcttctaaattacaaactacactggatgatttttttcgggaagaatct
cagcgtttagacaaagctctgcgtgataaacattcaggagacaaaaaaagacatgaacag
ctacagagtactttgtcccaaacaatcaccactaccttgtcaggaaaattagataaatct
gtcaaggctgaaattaagagtgctgtagtaccagcagttcaaaaggtattgagtgctatg
caggaacaactcaacactgcattagcacagaaactaactgcagcagatactgtattgaag
gacagtattggaaaaattgtgaaaagtaagggtgtggttgatgctattggtacggcagca
gctagtgcacttcagggacccattcaagtgacttaccgtgaggcattccagagctccatt
ttgccatcctttgagagggcatgccagaacatgttccaacaaataaacgactcatttcat
aaaggaactcaacaatacctgcaacaggttacaacggcactggataaccgtaaaagagag
gagaaacattcttttgaacctgttatgagacagttggaatcacaaaaacaatcattccaa
gcaataacagagaggctttcatcaaaccttatggctgactttgaagttatgatacagaaa
caactgtcatcatcaatagaaggtctacgggaagagattttttcacggctcttgtctgag
gtcctagcttcagtccaggactcagtacaaaaagaaatgggattaggacttgaaggccta
cgtcaacaattgaaagacatgattacagcttcagtagtaaacacttcacaacagtctcct
actactgcacatactcgggtggtagtttccaagctgttggaatctggacaagttggacag
gcattccaagaggccttgacagtgggagatctaaacattgtgatgtacgtctgtgaaaat
gtggatccagagaaactctcttcacagtccccatgtcctttgtcacaaccagtcttgctg
tctctaatacaacaattgtctgtggatcttactatgtacacagatctcaaacacaagtac
atagaagtagctcttatggcccttgatacacgtgatgctgttacaagagaacatatgcct
ggtgtgatagagggactatgccagcaacttcaagcagccatcgatgaagcttcaggaccc
attcagcggtcccttaagatgttacaaatggctgcaagatcacttcttgtaagatag
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