Stylophora pistillata (Smooth Cauliflower Coral): 111337854
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Entry
111337854 CDS
T05774
Name
(RefSeq) ATP-dependent RNA helicase DDX54-like
KO
K14808
ATP-dependent RNA helicase DDX54/DBP10 [EC:
5.6.2.7
]
Organism
spis
Stylophora pistillata (Smooth Cauliflower Coral)
Brite
KEGG Orthology (KO) [BR:
spis00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
spis03009
]
111337854
Enzymes [BR:
spis01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
111337854
Ribosome biogenesis [BR:
spis03009
]
Eukaryotic type
Pre-60S particles
Helicases
111337854
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
DBP10CT
Motif
Other DBs
NCBI-GeneID:
111337854
NCBI-ProteinID:
XP_022799957
LinkDB
All DBs
Position
Unknown
AA seq
898 aa
AA seq
DB search
MMAKKRSLESSKQKKNRKITSNHPSKFRRKKKKNEEADEFDEVETDGLYNHEQDEDLRHH
DDVDNSDDDDDTGLYTRGLVTQHNKKKKKSGGFQSMGLSFPVFKGVMKKGYKLPTPIQRK
TIPVIMDGKDVVAMARTGSGKTAAFLIPMFERLKAHSAKVGARGLILSPTRELALQTLKF
TKELGRFTGLKAAVVLGGDSLEGQFAALHGNPDIIVATPGRFLHVVMEMDLKLTSVEYVV
FDEADRLFEMGFAQQLHEILNRLPDSRQTLLFSATLPKLLVDFTKAGLTDPVLIRLDVDS
KLSEQLKLAFFSVKSVDKPAVLLHVLQNVVKPNEQTLVFTATKHHVEYLKELLDIAGIEC
SFVYSTLDQTARKINIGKFQHKKTNVMVVTDVAARGIDIPMLDNVINYNFPAKPKLFIHR
VGRVARAGRSGTAYSLVSGDELAHMVDLHLFLGRPLKFAGKDSQAQDDGLIGTVPQLLVD
DEENFMKTAHDQSHDLVSLRQVAANGYKQYIKSRPNTSSESVKRAKKIDTGSLSIHPIFT
HMVDLHLFLGRPLKFAGKDSQAQDDGLIGTVPQLLVDDEENFMKTAHDQSHDLVSLRQVA
ANGYKQYIKSRPNTSSESVKRAKKIDTGSLSIHPIFKLSSSEGASTKVDILDGVKNFRPK
QTIFEIGSTSKSTAQSIMMSKRKRHSDVIERAQRLKLDELNTGQGRGTGTEREQESGLTT
DDIQVSENGTCFLSRLGLKSFEKDVSGAVMDIQADEAEGMRQAKTIKKWDRKRKNFVGED
GNVKKIRTESGIRIPASYRKNIYRDWLQRHKMDVPGSEDREENGARPEYKRGKKGKGGSK
FSARGKGAVGKTFKPRGNELKSKEQILKARHRKQKTMQRQNRGTQKGKGGKGKSGRKK
NT seq
2697 nt
NT seq
+upstream
nt +downstream
nt
atgatggccaagaaaaggtctcttgagtcttctaaacagaaaaagaataggaaaataact
agcaatcatccatcgaagtttagaagaaagaaaaagaagaatgaagaggctgatgagttt
gatgaggtggaaactgatggactatataatcatgagcaagatgaagatttaagacatcat
gatgatgttgacaatagtgatgatgatgatgacacgggactttataccagaggacttgtc
actcagcataacaaaaagaagaaaaaatctggaggatttcaatctatgggcttaagtttc
ccagtgttcaaaggagttatgaagaaaggttacaaacttcccacacctattcaaagaaag
acgataccagtaattatggatgggaaggatgtggtagccatggcacgtacaggctctggt
aaaactgcagccttcttgataccaatgtttgaaagactcaaggcccattcagccaaggtt
ggcgctagaggactgatcctatcaccaacccgtgagttagctctccaaaccctgaaattc
accaaagagctgggaaggtttactggcttaaaggctgctgttgtgcttggtggagacagt
ttggaaggtcagtttgcagcattgcatggaaatccagatattattgtagctactccagga
cggtttcttcatgttgtgatggaaatggacctgaaactaacatctgtggaatacgttgtg
tttgatgaggctgacaggctctttgagatgggatttgctcagcaacttcatgaaatcctg
aatcgtcttccagactcaaggcaaactcttctgttttctgcaactcttccaaagctattg
gtggatttcaccaaagcaggcttgactgatccggtgctcataagactggatgttgactcc
aaactcagtgaacagcttaagctggctttcttttcggtgaaatcagttgacaaaccagct
gtgctattgcacgttcttcaaaatgtggtcaaaccaaatgaacagacccttgtatttacg
gccacaaagcatcatgtagaatacttgaaagagctgttagatattgctggaatagagtgc
tcctttgtgtacagcacactggatcagacagcaaggaagatcaacattggaaagtttcaa
cacaagaagacaaacgtgatggttgttaccgatgtggctgctcgtggaattgacatcccc
atgttagacaacgtgataaactataacttcccagccaaaccgaagctttttatccatcga
gtaggccgagttgccagagctggcagaagtgggacagcttactcccttgtgagcggtgat
gagctagcccatatggtggatcttcatcttttccttggtcgcccgctaaagtttgctgga
aaggactcgcaagctcaagatgatgggcttataggcacggttcctcagctgctcgtagat
gacgaggagaattttatgaaaacggcgcatgaccaatcacatgacttggtttctcttcga
caagtggctgctaatggatacaaacagtacatcaaatccaggccaaatacttcatcagaa
tctgtgaagagggcaaaaaagatcgacactggctctctttcgattcatcccatattcacc
catatggtggatcttcatcttttccttggtcgcccgctaaagtttgctggaaaggactcg
caagctcaagatgatgggcttataggcacggttcctcagctgctcgtagatgacgaggag
aattttatgaaaacggcgcatgaccaatcacatgacttggtttctcttcgacaagtggct
gctaatggatacaaacagtacatcaaatccaggccaaatacttcatcagaatctgtgaag
agggcaaaaaagatcgacactggctctctttcgattcatcccatattcaagttatcctcc
agtgaaggggcatctacaaaggtcgacattttggatggtgtgaagaacttcagacctaaa
cagactattttcgagattggttcaacatcaaaatccacggcgcagtccatcatgatgtca
aaacgaaaacgtcacagtgacgtaattgagagagctcagcggctgaaactagatgaattg
aacactggccaggggaggggtactggtaccgaacgagagcaagagagtggtctgactacg
gatgatatccaagtgagtgaaaacggaacgtgttttctttccagacttggtttgaagtcg
tttgaaaaggacgtatctggcgccgtgatggatatacaggcggatgaggctgaaggaatg
cggcaggcgaagacgatcaaaaaatgggatcggaaaaggaaaaatttcgttggcgaagac
ggaaacgttaagaaaatccgaactgagagcggcattaggattccagcttcctacaggaaa
aacatctaccgcgactggttacaaagacacaagatggacgttcccggatccgaagatcgc
gaggagaatggggcgaggccggaatataaaagagggaagaaaggtaaaggtggaagcaaa
ttctcagccagaggaaaaggagcggtcgggaaaacctttaaaccgcgtgggaacgaacta
aaatccaaggaacaaatactgaaagctcgacacaggaagcaaaaaactatgcagcggcaa
aatagaggaacacaaaaaggaaaaggtgggaaaggaaaatcgggcaggaaaaagtga
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