Stylophora pistillata (Smooth Cauliflower Coral): 111337961
Help
Entry
111337961 CDS
T05774
Name
(RefSeq) TATA box-binding protein-associated factor RNA polymerase I subunit B-like isoform X1
KO
K15213
TATA box-binding protein-associated factor RNA polymerase I subunit B
Organism
spis
Stylophora pistillata (Smooth Cauliflower Coral)
Brite
KEGG Orthology (KO) [BR:
spis00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
spis03021
]
111337961
Transcription machinery [BR:
spis03021
]
Eukaryotic type
RNA polymerase I system
Basal transcription factors
SL1/TIF-1B
111337961
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rrn7_cyclin_N
Rrn7_cyclin_C
Zn_ribbon_RRN7
Motif
Other DBs
NCBI-GeneID:
111337961
NCBI-ProteinID:
XP_022800093
LinkDB
All DBs
Position
Unknown
AA seq
627 aa
AA seq
DB search
MPSCVLCDGEVFDCIDGLYYCKSCGTQSQDMRDEEMQDPYEAGNVRQLQLSEKGRGGRKK
QFIADKGKPWFMYEAYQHIIRMQVEYLIKLGVNEALKDVVFKLWYKYLQVTQSAFTGSPE
GAVPTKGSIFYPRDANLLNTNKRRKSGQKRKLDPCESDDDELELCSHFSDEEFYEGDDPS
EALPKDDDNADDLNLGDDWTSLCRSKEMHVDDVSDSSEDEFIGSVTCHQSKKKGVRYGCV
SLQCTLAFCYLGLLWMDEPVFISDLVRWAKQGQLPYFQITRHIPGHMKFGHGDFQSLCPL
RVPPVSSILRRASTIAKLLRLPRFPEPKLSTYTARFITDLHLPGFLHGVVRKLAEKVKVE
TNIHPVFQSSIPNFEAGAMALIVVALKLCYGIDDKTEKDHEEKAISMELGSKEGNCHTIP
LFTDWLKSWKHCEARKFHSGIPWTDEQAKLVGDPTSYSAFCKSDLFGSWEPADRVYTGTQ
AKNLRANRITNEESQSRYAQLFKSLMTRQQDEDFNSTDTPQVTSFPATCRHAENSESGSE
SCFDRIHSRGINVESVLGGDTAEGNDLRYICYSADPADQDTNFHSSYKVLLSVLADRVEM
MPADIQAKVHKLENALFFKKRLVKGVL
NT seq
1884 nt
NT seq
+upstream
nt +downstream
nt
atgccgtcgtgtgttttgtgcgatggagaagtctttgactgtattgatgggctgtattac
tgcaaaagctgtggaactcagtctcaggatatgagagatgaagagatgcaagatccctat
gaagctggaaatgttaggcaattgcagttatcagagaagggcagaggtggaagaaagaaa
cagttcattgcagacaaagggaaaccttggtttatgtacgaagcatatcagcacatcatt
aggatgcaagttgaatatctgataaaacttggagtcaacgaggcattgaaggatgttgtc
tttaagctgtggtacaagtatttgcaggtcactcaaagtgcctttactggatctcctgag
ggagctgtaccaaccaagggttcaattttctacccacgggatgctaatctcttaaacaca
aataaaagaaggaagtctggacaaaagaggaagctggatccttgtgaatcagatgatgat
gaattagaactgtgttcacactttagtgatgaggagttttatgaaggtgatgatccctca
gaagcattgccaaaagatgatgataatgctgatgatttgaatctgggtgatgattggact
agtctctgtcgcagcaaagagatgcatgtagatgatgtctcggacagtagcgaagatgaa
tttattggttccgtgacttgccatcaatcgaaaaaaaaaggagtaagatatgggtgtgtt
tcccttcagtgcaccctagcattttgttatcttggcctgctgtggatggatgaaccagtt
tttatcagtgacttggtgagatgggctaaacaaggacagctcccttacttccagataaca
agacacatccctgggcacatgaaatttggtcatggtgattttcagagtttgtgccctctt
agagttcccccagtatcatccattcttcgacgtgcgtcaacgattgcaaaactactgcga
cttccacgttttccagaacctaaattatccacctacacggcacgttttatcacagatctg
catcttccaggttttcttcatggtgtggtgcgcaaactagcagaaaaagtgaaagttgaa
accaacattcacccagtctttcagtcctccattccaaatttcgaagctggtgctatggct
ttgattgttgttgccttgaaactctgttacggaattgatgacaaaaccgaaaaggaccat
gaagaaaaagccatatccatggaattaggctcaaaagaaggaaattgtcacacaattccc
ctgttcactgattggttgaaaagctggaagcattgcgaagccaggaagttccacagtggt
attccttggacagatgaacaggctaaacttgttggagaccccacgtcgtacagtgcgttc
tgtaaatcggacctttttgggtcgtgggaaccagccgaccgcgtttacactggaactcag
gcgaaaaatttgcgtgcaaacagaatcacaaacgaggagagccagagcaggtatgcacaa
ctgttcaagagcctaatgacacgacaacaggacgaggatttcaatagtacagacacgccc
caagtgacaagttttcccgccacgtgtagacacgcggagaactctgaaagtggctccgaa
agttgttttgatagaatacattcgcgtggaatcaacgtagaatctgtccttgggggtgat
acagcagagggcaatgatttgaggtacatttgctactcagccgaccctgctgatcaagac
actaattttcacagttcttacaaggtgctgttgagtgttttggcagaccgcgtagaaatg
atgcctgcggatatacaagcaaaagtccacaaacttgaaaatgcgttgttttttaaaaaa
cgtcttgtcaagggagtgctgtga
DBGET
integrated database retrieval system
