Stylophora pistillata (Smooth Cauliflower Coral): 111338787
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Entry
111338787 CDS
T05774
Name
(RefSeq) DExH-box ATP-dependent RNA helicase DExH1-like
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
spis
Stylophora pistillata (Smooth Cauliflower Coral)
Pathway
spis03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
spis00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
111338787
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spis03019
]
111338787
03012 Translation factors [BR:
spis03012
]
111338787
Enzymes [BR:
spis01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
111338787
Messenger RNA biogenesis [BR:
spis03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
111338787
Translation factors [BR:
spis03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
111338787
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
HA2_N
Helicase_C
Motif
Other DBs
NCBI-GeneID:
111338787
NCBI-ProteinID:
XP_022801050
LinkDB
All DBs
Position
Unknown
AA seq
488 aa
AA seq
DB search
MLPMFNQRAVFERPPVGVRKIVLATNIAETSITIDDIVYVINAGNHKEKIHDTGKKVSCL
MTHWTSQASVVQRRGRAGRCQPGLCFNLFTRQRFEHMAQYQSPEMQRVSLEEIVLQTKIQ
SIDESCSVRNFLSKALDPPSPFAVHHAITLLQEIGAMDTKEQLTPLGRHMAHLPVEPRIA
KMIIYGAIFRCLDPVLTIAACLNYKHPFVSPLNLREQADQSRKSFAGDSRSDHVALLNAY
NGWLEAVSRSQGKQFAQQRFLHWGTLNMIRGTRDQFSRLLHDSDLVPSSSSDDAVNYFSG
NMELVKAILCAGLFPNAVKVGLALESKGRGGKKRVRVGFRTKSDGRVVLHPSSVNSDEKQ
FLSQWLVYHDKVKSSQVFIRDSSMVHPIALICFSGKDVREIHQEHGPSVLQPRVTLAVGG
DQWMAFYCSPRLARVLQAIRLEINKMVACSVSAAVTNNALFYYHGKLMETVVLLLTLPVQ
KPLSSSPW
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atgcttccaatgtttaaccaacgagcagtttttgaaaggccccctgttggagtgcgcaag
attgtattagcaacaaacatagcagagacttcaataactatcgatgatatagtctacgtt
attaacgccggcaatcacaaggaaaaaattcatgatacaggaaagaaggtttcttgtttg
atgacgcattggacatctcaggccagtgtggttcaaagacgaggaagggcaggtcgttgt
caacctggtttgtgcttcaacctcttcacaagacaacgttttgaacatatggctcagtac
cagtcacctgaaatgcaaagagtttccctcgaggagatcgtcctccaaacaaagatccaa
tctatagacgaatcctgctccgtacggaattttttgtctaaggctctggatcctccatcg
ccatttgccgttcaccatgcaataacactgttacaagagattggagcaatggacacaaag
gaacaattgacgccgcttggtaggcacatggcacatttacccgtcgagccacgaatagca
aaaatgattatctacggtgctattttcaggtgcttggatccagtgttgaccattgcagca
tgccttaattataaacatccatttgtgtcgccgctcaacttgcgagagcaggccgatcag
tctcgcaaaagctttgccggtgacagcagaagcgaccatgtggcgctactgaatgcttat
aatggatggttagaggcagtgagccgatctcaaggaaaacaatttgctcagcaacggttt
cttcactggggcacgctcaatatgatccgcggtacgcgagaccaattcagccgcctgctt
catgactcggacttagttccaagctccagcagtgatgacgcggtcaactacttttctgga
aacatggaactggttaaggctattttatgcgctggtttgtttccaaatgctgttaaagtt
ggtcttgccttagaatctaaaggaaggggaggaaagaagcgagtcagagttggtttcaga
accaaatctgatggaagagtcgtattgcatccttcctctgtcaattctgatgagaaacaa
tttcttagccagtggcttgtgtatcatgacaaagtgaaatcctctcaagtctttatccgt
gacagtagtatggtccaccctatagctttgatctgtttctctggaaaggacgtacgtgaa
attcatcaagaacacggcccatcagttctgcagccccgtgttacactggcggtgggtggg
gaccaatggatggcgttttactgctcgccaaggcttgcccgagtactgcaggccattaga
ctagagataaacaagatggtagcttgtagtgtttcagctgcagttacaaataacgcgctg
ttttactaccacggcaagttgatggagactgtggtcttgctgctcaccttgccagtacag
aaacctctctcgtcttcgccttggtag
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