Stylophora pistillata (Smooth Cauliflower Coral): 111338898
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Entry
111338898 CDS
T05774
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm8
KO
K12627
U6 snRNA-associated Sm-like protein LSm8
Organism
spis
Stylophora pistillata (Smooth Cauliflower Coral)
Pathway
spis03018
RNA degradation
spis03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
spis00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
111338898
09123 Folding, sorting and degradation
03018 RNA degradation
111338898
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spis03019
]
111338898
03041 Spliceosome [BR:
spis03041
]
111338898
Messenger RNA biogenesis [BR:
spis03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
111338898
mRNA degradation factors
5'-3' decay
Lsm complex
111338898
Spliceosome [BR:
spis03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
111338898
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
DUF150_C
Motif
Other DBs
NCBI-GeneID:
111338898
NCBI-ProteinID:
XP_022801182
LinkDB
All DBs
Position
Unknown
AA seq
96 aa
AA seq
DB search
MAATLETYVNHTVAVITQDGRMIVGTLKGFDQTVNLILDESHERVFSSGSGVEQVMLGLY
IIRGDNIAVIGEIDEEADSNLDLSSIRADPLNAVVY
NT seq
291 nt
NT seq
+upstream
nt +downstream
nt
atggcggcaactttggagacgtatgtaaatcataccgtagcagttattacacaagatgga
agaatgattgtgggaaccctcaaagggtttgatcagacagtgaatttaattttggatgag
agccatgagagagtgttctcatcagggagtggagtggagcaagtaatgctgggtctttac
atcataagaggagacaatattgctgtcataggagaaatagatgaggaagcagattctaac
ctagatttgagtagtattcgtgctgatccacttaatgctgtagtttactaa
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integrated database retrieval system
