Stylophora pistillata (Smooth Cauliflower Coral): 111339088
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Entry
111339088 CDS
T05774
Name
(RefSeq) ATP-dependent RNA helicase DHX36-like
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
spis
Stylophora pistillata (Smooth Cauliflower Coral)
Pathway
spis03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
spis00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
111339088
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spis03019
]
111339088
03012 Translation factors [BR:
spis03012
]
111339088
Enzymes [BR:
spis01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
111339088
Messenger RNA biogenesis [BR:
spis03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
111339088
Translation factors [BR:
spis03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
111339088
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
HA2_C
DEAD
HA2_N
nSTAND3
AAA_22
NB-ARC
ATPase
NACHT
T2SSE
ATPase_2
TsaE
AAA_30
ABC_tran
Cas3-like_C_2
YkuI_C
AAA_16
Motif
Other DBs
NCBI-GeneID:
111339088
NCBI-ProteinID:
XP_022801408
LinkDB
All DBs
Position
Unknown
AA seq
1013 aa
AA seq
DB search
MGLFVRAAGIHLSRKQFSRLIITEVDSKMHKGGGHGKRGRGGHHPSGLTGKQIGLWYRNR
GKQKREQKQRAFITMDSHHEKRISQLLGEIRQSERSNGDRAEEGASAGPDWHDALTEEQY
NEQHLQDELDNVDQDQAKASGENRKTRQLASKHHFNMGRCLQPDSMLDHQLREEQQRRFS
SESSRFKAMQEFRKSLPAYAQKEELLQLLNSEQVIVISGETGCGKTTQVAQFILDDAIDK
GYGSTCRVVCTQPRRISTISVAERVASERGENCGENGSVGYQIRLESKLPREQGSILYCT
TGVLLRWLVSDPLLLGCSHIILDEIHERDILSDFLIIIVKDLLSKRPDLKLILMSATLNS
EMFSAYFDNCKMADIPGFTHPVQEVYLEEIIEKTGYEVAEKAGVSGRRDRPEPKWKKYRR
GKSEAKDRRLEKSNAWLTDSQESEKQMEWEQYLNSLTGRFSFKTITTLRNMDLEKIDFEL
LVRLITHISLQMEKGAILVFLPGWDDISKLHDRLKSQTLFNSDKFLIIPLHSMMPSTNQR
EVFDRPPEGVRKIVIATNIAETSITIDDVVFVVDAGKVKEKTYDMFHKVACLQPVWISKA
SSRQRRGRAGRVQPGYCFHLFTQFRAQSLDDYQLPEMLRTPLEELCLQIKILKLGMIRPF
LSRALQPPEEQAVTNALEDLHQLKALDANEDLTPLGHHLAALPVNPRVGKIILFGAIFSC
LDPVLTVASVLGFKDPFVFPLGKQKEAEQARSRFAGDTRSDHLALLNAFQGWETSVRKGN
ERNYCWRNFLSVNTMRMIKDMKQQFSGLLYDIGFLDLADSRAPSANYNSENLKLVKAILC
AGLYPNVASINHHPKFLRPPKLRTHQDGIVYLHPKSVNAEVRVYEDNWLIYHEKMKSTSL
FLYDSTMIAPFPLLFFGGEISVFVEEGYETVAIDDFIKFKSPNRIANLVKELRVELDKLL
RQKIAQPDMKLSVGTGTGNRESALLRAIIDLITSEENTNWRKQRALAGEEGRT
NT seq
3042 nt
NT seq
+upstream
nt +downstream
nt
atggggctttttgtgagagcagcgggaattcatttatcaagaaagcaattttccaggctg
ataattactgaggttgactcaaaaatgcacaaaggaggtggccatggtaaaagaggtaga
ggtggacatcacccgtctggtctgacaggaaaacagattggcttgtggtatagaaataga
ggaaaacagaagagggaacagaaacagcgtgcatttattacaatggacagtcaccatgaa
aagagaataagtcagctgcttggagaaatcagacaaagtgaaagaagcaacggtgacaga
gcagaggaaggagcatcagctggcccagactggcacgatgctcttacagaagaacagtac
aatgaacaacatctgcaagatgagctagacaatgtggatcaagatcaggcaaaggcatct
ggtgagaacagaaaaacaaggcaattagcttccaagcatcattttaatatgggcaggtgt
ttgcagccagattccatgttagatcatcagttaagagaagaacagcaaagaaggttctca
tcagaaagttcaagatttaaggccatgcaggaattccgtaaaagtttgccagcttatgca
cagaaagaggaattacttcaactcttaaactcagagcaggtcattgttatcagtggggag
acaggatgtggaaaaacaactcaggttgcccagtttatcttggatgatgctattgacaaa
ggctatggatcaacgtgccgagttgtttgtactcagcccaggagaataagtactatctct
gtggcagaaagagttgcatcagaaagaggtgaaaattgtggtgaaaatggaagtgttggt
taccagataagactggaaagcaagcttccacgagagcaaggctctattctctattgtaca
acaggagtgctgctcagatggctggtgtctgatccattgcttcttggttgcagtcacatc
attcttgatgagattcatgaaagggatattttatcagatttcctgatcattattgtcaaa
gatcttttatcaaaaaggccagatttaaaactgatcctcatgagtgcaactttgaattca
gagatgttctcggcatattttgataattgcaaaatggctgatattcctggtttcacccac
cctgttcaggaggtttaccttgaggaaataattgaaaaaacagggtatgaagttgcagaa
aaagctggtgtctctggtagaagagacagaccagaaccaaaatggaaaaagtacaggagg
ggtaaaagtgaggcaaaagacagacggctagagaaaagcaatgcatggttgacagacagt
caggagtctgaaaaacagatggagtgggagcagtatctcaattcacttacaggaagattt
tcttttaaaacaatcacaacccttcgaaacatggatttggaaaaaatcgacttcgaactt
cttgtccgactgataactcacatctcacttcaaatggagaagggagctatactcgttttt
ctacctggctgggatgatattagtaaacttcacgacaggttgaaaagccaaacgcttttt
aattcagataaattccttatcattcctttacactctatgatgccgtcaacaaaccaacga
gaggtatttgaccgcccacccgaaggtgtcaggaagatagtaattgccacgaatattgct
gaaacaagtatcacaattgatgatgtggtgtttgttgtggatgctggcaaggtgaaagaa
aagacgtatgatatgttccacaaagtagcctgtttacagcctgtatggatcagtaaagcc
tcctcgagacaaagacgtggtcgagctggaagagtacagcctggatactgctttcatttg
ttcacacaattccgtgcccagtcccttgacgactatcagctgccagagatgcttcggaca
cctcttgaggaattgtgcctgcagattaagattcttaaactgggtatgatccgacctttt
ctgtccagagcattgcagcctccagaggaacaagcggtcaccaatgctttagaagatctt
catcagcttaaagcactggacgcgaatgaagatttaactccccttggtcatcatttggcc
gctttaccagtcaatcccagagtgggcaagatcattttgtttggtgctatattctcgtgt
ttagatccagttctaactgtggcgtctgttttgggattcaaggatccttttgtatttcct
ttgggaaaacaaaaagaagccgagcaagcccgctctaggtttgctggggacactcgcagt
gaccatcttgccctattgaacgcttttcagggttgggagacttctgttcgtaaagggaat
gaacgaaattactgctggagaaatttcctatcggtgaacacgatgaggatgattaaagat
atgaaacaacagttctccggattactttatgacattggtttcctagatttagccgactca
agggccccttccgctaattacaattcagagaatttaaaacttgtgaaagccatactttgc
gccgggttatatccaaatgttgctagcatcaaccaccatcctaagtttctaaggccccca
aagcttcgaactcatcaagatggtattgtttatttgcatcccaaatcagtgaacgctgaa
gtcagagtttatgaagataactggttgatttatcacgaaaagatgaaatccacctctctc
ttcctgtatgacagcactatgatagcaccctttcctctcctcttctttggcggtgaaatt
tctgtgtttgtagaagagggctacgaaacagtcgctatcgacgatttcatcaaattcaag
tctccaaacagaattgcgaatttagtcaaggagttacgagtcgaactggacaaactgctt
agacagaaaatcgctcagccggatatgaagctaagcgtggggactgggacgggtaacagg
gaaagtgctctgctgcgagcaataattgacttgatcaccagcgaggagaatacaaactgg
agaaaacaaagagctcttgcaggagaagaaggaaggacttaa
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