Stylophora pistillata (Smooth Cauliflower Coral): 111339314
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Entry
111339314 CDS
T05774
Name
(RefSeq) eukaryotic initiation factor 4A-III
KO
K13025
ATP-dependent RNA helicase [EC:
5.6.2.7
]
Organism
spis
Stylophora pistillata (Smooth Cauliflower Coral)
Pathway
spis03013
Nucleocytoplasmic transport
spis03015
mRNA surveillance pathway
spis03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
spis00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
111339314
09122 Translation
03013 Nucleocytoplasmic transport
111339314
03015 mRNA surveillance pathway
111339314
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spis03019
]
111339314
03041 Spliceosome [BR:
spis03041
]
111339314
03009 Ribosome biogenesis [BR:
spis03009
]
111339314
03012 Translation factors [BR:
spis03012
]
111339314
Enzymes [BR:
spis01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
111339314
Messenger RNA biogenesis [BR:
spis03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
111339314
mRNA cycle factors
Stress granule specific factors
111339314
Spliceosome [BR:
spis03041
]
Complex C
Other components
EJC/TREX
111339314
Ribosome biogenesis [BR:
spis03009
]
Eukaryotic type
90S particles
Helicases
111339314
Translation factors [BR:
spis03012
]
Eukaryotic type
Initiation factors
eIF-4
111339314
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_22
AAA_30
Cas3-like_C_2
Helicase_RecD
UvrD-helicase
Flavi_DEAD
TniB
Motif
Other DBs
NCBI-GeneID:
111339314
NCBI-ProteinID:
XP_022801676
LinkDB
All DBs
Position
Unknown
AA seq
403 aa
AA seq
DB search
MSRKRKVVADDEEDLTKIEFSTSEEVDVVPTFDQLKLREDLVRGIYAYGFEKPSAIQQRA
IKPIIKGRDVIAQAQSGTGKTATLSISVLQSIDIQTRETQAVILSPTRELAQQIQKVILA
LGDYMSIQCHACIGGTNVGEDIRKLDYGQHVVSGTPGRVFDMIRRRSLRTRSIKMLVLDE
ADEMLNKGFKEQIYDVYRYLPPATQVVLLSATLPHEILEMTQKFMTDPIRILVKRDELTL
EGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLVEKMREANFTVSAMH
GDMPQKEREAIMKEFRSGQSRVLISTDVWARGIDVQQVSLVINYDLPNNRELYIHRIGRS
GRFGRKGVAINFVKSDDIRILRDIEQYYSTQIDEMPMNVADLI
NT seq
1212 nt
NT seq
+upstream
nt +downstream
nt
atgtctcgcaaaagaaaggttgtagccgacgacgaggaagatctaaccaagatcgaattc
tcaacttcagaggaggttgacgtcgttcccactttcgaccagctaaaacttcgggaagac
ttggttcgaggcatttacgcttatggttttgagaaaccatcggcaattcaacagcgtgct
attaaaccgattatcaaaggaagagacgtcattgcacaggcccagtctggaacaggaaaa
acggccactctgtccatctctgtacttcagtcaatagatattcagacaagagaaacacag
gctgtgattttgtctccaactcgagaacttgcacaacaaattcagaaggtcattcttgct
cttggtgactacatgagcattcagtgtcatgcttgtattggaggaacaaatgtaggagag
gacatcagaaaacttgattatggacagcatgttgtgtctggtacaccaggcagagtcttt
gacatgataagaagaagaagcttaagaactcgatccattaaaatgttggtgttggatgaa
gcagatgaaatgttgaataagggttttaaggaacagatctatgatgtttacagatatctt
cccccagccactcaggttgtacttctaagtgcaacccttccacatgaaatcctagagatg
acccaaaagttcatgactgacccaattaggattcttgtcaagcgcgatgagttgacattg
gaaggcatcaaacagttctttgtggcagtggaacgtgaagaatggaagtttgacaccctc
tgtgatttatacgacactcttaccatcacacaagctgttattttctgcaacactaagaga
aaggtggactggcttgtggagaagatgcgagaggcaaacttcactgtttcagccatgcat
ggtgacatgccacagaaagaaagagaggccatcatgaaagaattcagatctggacagagt
cgagtgctgatctcaacagatgtgtgggctcgaggcattgatgtacagcaagtgtctctg
gtgatcaactatgacttgccaaacaaccgtgaattgtacattcacaggatcggtcgctct
ggtcgattcggtcgcaaaggtgtcgccatcaactttgtgaagtcagatgacatcagaatc
ttgcgtgacattgaacagtactacagtactcagattgatgaaatgcccatgaatgtggct
gatctcatttaa
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