Stylophora pistillata (Smooth Cauliflower Coral): 111340478
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Entry
111340478 CDS
T05774
Name
(RefSeq) probable ATP-dependent RNA helicase DDX60
KO
K20103
ATP-dependent RNA helicase DDX60 [EC:
5.6.2.7
]
Organism
spis
Stylophora pistillata (Smooth Cauliflower Coral)
Brite
KEGG Orthology (KO) [BR:
spis00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spis03019
]
111340478
Enzymes [BR:
spis01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
111340478
Messenger RNA biogenesis [BR:
spis03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
111340478
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PIN-like_DDX60
DEAD
ResIII
Helicase_C
SWI2_SNF2
PhoH
Motif
Other DBs
NCBI-GeneID:
111340478
NCBI-ProteinID:
XP_022803066
LinkDB
All DBs
Position
Unknown
AA seq
1851 aa
AA seq
DB search
MAEGGEADYSTSDPDSDVLVVDFSNGESDSYFSEDSIADDHVGNLSASEEKGEETKFQLE
YEEDEQVDEKEEGQFVNEPKKLNKDGRPEEPHEDDADKDEKPHEPPPNLSNTMDLVTKIF
YGQDVHTKSINILTDFADAEIFLIDGDSLLLEVLSEKSLDWSSGGQFLHLIYLAERFLQN
FTEKGGVFHIIFLKEMEIIWRSNSTMLLAREALILHLQHNTDFTVKTSMVNFWGKEWKDY
LNDEVPAFLLLADAEKIPFQLGELKETLEYFFRCLLFHCLAHGLNCVFISGIQTSATKVM
GFYSYSSATHKKEFTKFEKEIWNKWQLLVNSWQDQAYKYTPEWLEKFPRDAQIDVKAEVR
KALQPPPKGGCREVSTVVACVLILSKALMDPSITKEAMKTAEDKMKLFLLHTVLLNKLPL
KCRAHLIDENLLNEFCKAKDGNVYPFSEIHMCLWEILKTMQVVQGDHEKRDETGNDFFKS
VADLMDGRLIHTLFCALVEQRLKGIEGLILPEDVIEEVEDAWKKVVDVVNRSCSSHSLNA
QFFPFAEDVTDFHAAEVSVVRSNVDSTMKLRRLTEVQSDLVNNYAGNIRAEINVLAAEMS
DDEISNVGQEFDERYHWRSHKLLSDDYDRTKKSITDNPPNDPLLRKRYYKDKQKFARFRR
FYGNSLVGGSDQQISIPDPESGSKKKTGKKKEKKQGKKAAAIIEERLDETSKKARLEDQK
KWDGIVRDIETNLRRDNFSDILKSIDKFLLVCKFPELRLRALMKKVDSCFDAWKQIRNAD
KESNDMKYPVLLMESVHKIFQDLSSVMEEKNKKKLARIMQKLGFNDLVPLFYEMPPDREA
KTEQLSVHTTSARFQLEYMGHLLKREERTDPDSRVENFIPDTWQRELLDAVDNNESAVIV
APTSSGKTYASYYCMEKVLRQDNDSVVVYVAPTKALVNQVVATVDARFKKKMPEGRSMCG
VFTRDYRQNTLNSQILVTVPQCLEILFISPHRQHWTKNVKYVIFDEVHCIGSETGAEVWE
HLLLMIRCPFLALSATIGNPEDLRRWLQAAQDFREKEDRKSNEDIRKSYRVRLVKFEERY
SDLEKSIYLPIPKANEGSDVNGNKEFVRLHPCAQLGYKQLLENGFPGDMALTPKENLQLY
DTMVSVWPDCESLQNLRPETYFLEMKLIQKGHARQYESDLKREFNSWADSKQLTKVQSVI
TSLNSAFVEAHSSTEEQWGKLRMTSFGKSFIKKSFDKLIDQLRAQEKLPALVFSDDRKLC
EHLALGYAEKLEMKEQIMRRKANTREEINAQKRQGKAEKKLQRKRDELSKEKRYNCSPNR
VNSEPDDQDERNAISASNEVLPECTLAFTFWIGKEDYEEIMRRIWSIPDESSFKRALKRG
ISFHHSGCNAKKRSVVEMLFRGKYLQVVNSTSTLALGIHMPCKTVVFAGDSPYLNSLQYR
QMSGRAGRRGFDPLGNVIFFGIPYRKVQRLMTANIPKLVGNFPITVSLVLRLLLLTTKAN
DKKDALTKALALLSHPFICRKYPQMEIQIKIQFLFSVELLTRLSLVNKETGAPQEMAGLA
THLHYHEPSNYVLVSFLQCGLFHKLCKPGTNGKFSENVMRKMVLVLSHLIGRTNLHPSLM
LRTPSSSKVILEDLPSEFAKAVKSYNRRVTDVFSQYLATVAKWLETDRGEDNKLPLSGIE
FPKKASIDDIDEHDMIKVLANSSIQYSACSSFAALSGNTDFWLHPSSCKKTDDEANSGEE
EEEEEPLKYLLTIIRQDVYTDMNLVPILPVMNTLPLNAYALDFFKHGSSIVIENENGMQA
GDVYNVLKEFNLTIKSISCSLEQLGPETDNVVLAFKQLAQEYDEKFSKEFQ
NT seq
5556 nt
NT seq
+upstream
nt +downstream
nt
atggccgagggaggcgaagctgattattcaacatccgatccggactccgatgttcttgtg
gttgacttcagtaatggcgaaagtgacagctatttcagtgaggactctattgcggacgac
catgttgggaacctttctgccagtgaagaaaaaggagaagaaacgaaattccaacttgaa
tatgaggaagatgaacaagttgacgagaaggaggaaggacaatttgtgaatgagccaaag
aaactaaataaagatggaagacccgaagaaccgcatgaggatgatgctgacaaggacgaa
aaacctcatgaacctccacccaacctctccaatactatggatttggttacaaagatattc
tatggtcaagatgtgcatacgaagtctattaacatcctgacggactttgcagacgctgag
attttccttattgatggcgactccttgctgttagaggttcttagtgagaaaagcttggac
tggagtagcggtggacagtttttgcatcttatatacttagcggagcgatttttacaaaac
ttcacagagaaaggtggcgttttccacatcatcttccttaaagaaatggagatcatctgg
agaagtaattcgaccatgctgctcgcacgagaagccctcattcttcatctccagcacaac
acagattttaccgtgaaaacatcaatggtgaatttctggggaaaggagtggaaagattac
cttaatgacgaggtccctgcgtttttgctgttggcagatgctgaaaaaattcctttccag
cttggagagttaaaagaaacgttggaatatttttttcggtgtctcttgtttcattgtctc
gcacatggattgaattgtgtgtttatttcgggcattcagacaagtgcgaccaaagtgatg
ggattttacagctattcctcagctactcacaaaaaggagtttacgaagtttgaaaaagaa
atatggaacaaatggcaattactggtgaattcctggcaagatcaggcatataaatacact
cctgagtggttggaaaagtttcctcgagatgctcagattgatgtaaaagcagaagttcgc
aaagctcttcagcctccacccaaaggcggctgccgggaggtgtccacagtcgttgcgtgt
gtgctgatcctatctaaagcccttatggaccctagcattaccaaggaagcgatgaaaact
gcagaggacaaaatgaagcttttcttgcttcacactgtactactgaacaaactgccgttg
aagtgtagagctcacctcatagacgaaaacttgctgaatgaattctgtaaagcaaaggat
ggcaacgtctatccctttagcgagatccacatgtgtctatgggagattttaaagactatg
caagttgtgcagggagatcatgaaaaaagagacgaaactggcaatgactttttcaagtcc
gtggcagatttgatggatggacgtctgatccatactctcttttgcgctctggtggagcaa
aggttaaaaggcattgaaggactaattcttccagaggatgtcattgaggaagtagaagat
gcatggaaaaaagttgtagatgttgtaaacaggtcatgcagttctcattcccttaatgct
cagttttttccctttgccgaggatgtgacagattttcatgcagcagaagtttcagtggtg
cgttctaatgtagactccaccatgaagctcaggcgccttactgaagtgcaaagtgatctt
gtgaataattatgctgggaatattcgagcagaaattaacgtcctggcagcagagatgagt
gacgacgaaatatctaatgttggtcaagaatttgatgaacgataccactggcgttctcat
aagcttctttctgatgattatgacagaacaaagaaatctattactgataatcctccaaac
gatcctttgctaaggaaacggtattataaggataaacaaaagtttgcccgttttcgaaga
ttctacggcaactcactggttggtggcagtgatcaacaaataagcatccctgacccagag
tcaggatcaaagaagaaaacaggaaaaaaaaaggaaaaaaaacagggcaaaaaggctgca
gcaattatcgaggaacgtcttgacgaaacctcgaagaaagcgagattggaagatcaaaaa
aaatgggatggcattgtaagggacatcgaaacaaatctgaggagagataacttcagcgat
attcttaaatcgattgataaatttctattagtttgcaaatttccagaacttcgtcttcgt
gcgctcatgaaaaaagtcgacagttgctttgacgcctggaaacagataagaaatgctgac
aaagaatctaatgacatgaaatatcctgtacttttgatggaaagcgttcacaaaatcttt
caagacctatcgagtgtcatggaagaaaagaacaaaaagaaacttgctagaataatgcaa
aagctggggtttaacgaccttgtgcccttgttttatgagatgccaccagatcgtgaggca
aagaccgaacagctttctgttcacaccacaagcgcaagattccaacttgaatacatgggg
catttgctgaaacgggaagagagaaccgatccggactctcgggttgaaaattttattccg
gatacatggcagcgcgaacttctcgatgctgttgataacaatgagtcagcggtcatagtg
gcaccaacttcgtcaggaaagacttacgcctcctactattgcatggagaaagttttaagg
caagacaatgacagtgtagtggtctatgttgcaccgacaaaggcattagtcaatcaagtc
gttgctacagttgatgcacggtttaagaaaaaaatgcctgaaggaagatcaatgtgcggt
gttttcacgagagactatcgtcagaacacactaaattcccagattcttgttacagtcccc
cagtgtttggagatcctcttcatttctccacacagacagcattggactaagaatgtcaaa
tacgtgatttttgatgaggttcattgcattggttcggaaactggagctgaagtgtgggag
catctcctccttatgattcgctgtcccttcctggcgctgtcggcaaccattggaaatcca
gaggatctaagacgctggctgcaagccgcccaagactttcgtgaaaaggaggacagaaaa
agcaatgaagatataaggaagtcatatagggtcaggttagttaaatttgaagaacggtac
tccgatctggaaaagagcatttaccttccaattcctaaggcaaacgaaggtagcgatgtt
aacggcaacaaggagtttgtaagacttcatccatgtgcccagctaggatacaaacagctt
ctagaaaatggttttccaggtgatatggcacttacaccaaaagaaaatttgcagttgtat
gacactatggttagtgtgtggccagactgtgaatcactccagaatctccgtcctgagaca
tacttcctggaaatgaaattgatccaaaagggtcatgctcgacaatacgagagtgatctg
aagagggaattcaactcctgggcagacagcaaacagttgacaaaggttcagtcagttatt
acttctttgaactcagcttttgtggaagctcattcttcaactgaagaacaatggggtaaa
ctgagaatgacatcgtttggcaaaagtttcataaagaaaagttttgataaacttatcgac
cagctgagagcacaggaaaaactgcctgccttggtgtttagcgatgatcgtaaactgtgc
gaacatttggcactcggttatgctgagaaactagaaatgaaggaacaaattatgcgaaga
aaggccaacacaagagaagaaataaatgcacaaaagagacaaggaaaagctgaaaaaaag
ttgcagagaaaaagagatgaattatcaaaagagaaaaggtataactgctctccaaacaga
gtaaacagcgaaccggatgaccaagatgagaggaatgctatttcagcctcgaacgaagtt
ctaccagagtgcacattagcatttacattttggattggaaaagaggattacgaagagata
atgagaagaatctggtccatccctgacgaatcgtcattcaagcgcgctctaaaacgagga
atcagttttcatcatagtggatgtaacgccaaaaagcgctccgtcgtggagatgttgttc
agaggcaaatatctgcaggtggttaattcaacatcaacgttggctctgggtattcacatg
ccttgcaagacagtcgtgtttgctggagactcgccctacttaaattcactgcagtaccga
cagatgtctggaagggcgggtcggagaggttttgaccccttgggaaatgtcattttcttt
ggaattccttaccgtaaagtccaacgcctcatgacggcaaacatcccgaagcttgtgggc
aacttccccatcactgtatcattggtactgcggctgcttctgctgacgaccaaagcaaat
gacaagaaagatgccctcactaaggccctagcattgctttctcatccttttatttgccga
aaatacccgcagatggaaatccagatcaagatacaattcctcttcagcgttgaacttctg
actagactgtctcttgtaaacaaagaaaccggagctccacaagaaatggctggactggcg
acccaccttcattaccatgaaccttccaattatgttctggtcagttttctacaatgtggt
ctcttccacaaattgtgtaagccagggacaaacggtaaattttccgaaaatgttatgagg
aaaatggtgcttgttctcagccacctaattggaagaactaatcttcatccttctctcatg
ctaaggactccatcttcttcaaaagtaattttggaggatctcccgagcgaatttgccaag
gcagtcaaaagctacaaccgtcgggtcaccgatgtgttcagtcagtaccttgccacagta
gctaagtggctggaaacggacagaggagaggataacaaactccctctatcaggaatagaa
tttccaaagaaagccagcattgatgatattgacgagcacgatatgatcaaagtccttgcg
aactcttctatacagtattcggcgtgttcctccttcgctgcgctatcaggaaacaccgac
ttctggttacatccttcgagctgcaaaaaaactgacgatgaggctaacagtggcgaggaa
gaagaggaagaagagccgcttaaatatctgctcacgatcattcgtcaagatgtctacacg
gacatgaatctcgttcccattcttccagtcatgaataccctacccctgaatgcttatgct
ctggatttttttaagcatggatcttccatagtcattgagaatgaaaacggaatgcaagct
ggcgatgtttacaatgtcctcaaggagtttaacctcactattaagtcaatcagttgttca
ctggaacagctgggtcccgaaactgacaatgtggtgttggcttttaagcagctggctcag
gagtacgacgagaagttcagcaaggagtttcaatga
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integrated database retrieval system
