Stylophora pistillata (Smooth Cauliflower Coral): 111340613
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Entry
111340613 CDS
T05774
Name
(RefSeq) pre-mRNA-processing factor 17-like
KO
K12816
pre-mRNA-processing factor 17
Organism
spis
Stylophora pistillata (Smooth Cauliflower Coral)
Pathway
spis03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
spis00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
111340613
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
spis03041
]
111340613
Spliceosome [BR:
spis03041
]
Complex C
Other components
Step II factors
111340613
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WDR55
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_WDR90_POC16_2nd
EIF3I
Beta-prop_EML
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_2nd
Beta-prop_RIG_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_C
Beta-prop_WDR75_1st
Beta-prop_EIPR1
WD40_RFWD3
Beta-prop_DCAF4
ANAPC4_WD40
WDR90_beta-prop_4th
WD40_MABP1-WDR62_1st
Beta-prop_SPT8
Beta-prop_IFT122_1st
Beta-prop_IFT140_1st
Beta-prop_SCAP
eIF2A
Beta-prop_NWD2_C
NBCH_WD40
VPS11_N
STAT_bind
Beta-prop_HPS5
Motif
Other DBs
NCBI-GeneID:
111340613
NCBI-ProteinID:
XP_022803221
LinkDB
All DBs
Position
Unknown
AA seq
574 aa
AA seq
DB search
YGALVNAYGDDSDSEGKESPEEETTADHTAHLNSNVSISQLQSKVQVKSAPVVTAKEAVG
VIRQVDPTTKEVTYNPRYEEMYSPEVGPSNPFKTRQQNAPKNALAGYVEPAHMSDFTFET
QRRTFTSYGYALDPSVTGGASTSGERFVGDVEKAEEKKGLTIFEAAEARPGDKRKREKPG
DPGDIEGYKGPWATFVDEAKVAKPSEEQAAKLEEFEMTKQKRTKNEEQVVEEKTTLHVQD
SVDYQGRSYLHIPKDLDVKLDTDEPPERCYLPKKHIHTWTGHSKGVSSIRFFPTSAHLLL
SCSMDCKIKLWEVYGKRRCLRTFMGHSKAVRDISFNNSGAQFLSAAYDRYVKLWDTETGQ
CTGRFTNRKVPYCVKFNPDEDKQHLFVCGTSDKKILTWDTRANEIVQEYDRHLGAVNTIT
FVDQNRRFVTTSDDKSIRVWEWDIPVDFKYIAEPSMHSMPAVALHPNNKWMACQSMDNQI
MVFAVLNRFRQNRKKTFKGHMVAGYACQLNFSPDGSYLISGDADGKLCIWDWKSTKLYSK
FKAHDAVCIACLWHPHETSKVVTCGWDGLIKYWD
NT seq
1725 nt
NT seq
+upstream
nt +downstream
nt
tatggngcccttgtaaatgcctacggtgatgatagcgattctgaaggaaaagaaagtcct
gaagaggaaactacagcggatcatacggcacatctaaattctaatgtctcaatttcacaa
cttcaatccaaagtgcaggttaaaagtgctccggttgtaactgcaaaggaggctgtcggt
gtgattagacaagtcgatcccaccaccaaggaggtcacttacaacccgcgatatgaagag
atgtactccccggaggttggaccatctaatccctttaaaactaggcagcaaaatgctcca
aagaatgcactagctggttatgttgaaccagctcacatgagtgactttacatttgagact
caaagaagaacatttactagttatggttatgccctggatccaagtgtaacaggaggggcc
agcacaagtggggaaaggtttgttggagatgttgaaaaagcagaggagaagaaaggcctg
acaatatttgaagcagcagaagctcgcccaggtgacaagagaaaacgagaaaagcctggt
gatcctggagacattgaaggatacaaaggtccatgggcaacatttgttgatgaagccaaa
gttgctaagccttctgaggaacaagcagctaaacttgaggaatttgagatgacaaaacaa
aagagaactaagaatgaagaacaagttgtggaagaaaagaccactcttcatgttcaagat
tctgtggactatcaaggtcgctcttatcttcacattccaaaagatctggatgttaaactg
gatacagatgaaccaccagagagatgttatttaccaaagaaacacattcacacatggact
ggacactcaaagggtgtctcctccatcaggttctttccaacgtcagctcacctgttattg
tcttgtagtatggactgcaaaattaagctttgggaagtttacggaaaaagacgctgttta
agaacattcatgggtcacagtaaagctgtgcgtgacatttcgtttaacaacagtggagca
cagtttctaagtgctgcttatgatagatatgtcaagctttgggacacagaaacagggcag
tgcactggacgttttaccaaccgaaaagttccatactgtgtcaagtttaaccctgacgag
gataagcagcatttattcgtttgcggaacatcagacaagaaaatattaacgtgggacacc
cgagcgaacgaaattgttcaagaatacgacagacatcttggcgcggtgaacacgataaca
tttgtggatcaaaacagaagattcgtgacgacttcagatgacaaaagtatcagagtatgg
gaatgggacattcctgtggatttcaagtatattgccgaacccagtatgcattcgatgcct
gcagttgctcttcacccaaacaacaaatggatggcatgtcagtctatggacaatcaaatc
atggtgttcgcagtactaaatcgtttccgtcagaacagaaagaaaacgttcaaaggccac
atggttgcaggctacgcatgtcagttgaacttctctccggatggaagttatcttatttcc
ggcgacgcagatggcaagctttgtatatgggattggaaatcgacaaaactctacagtaag
tttaaagcccacgacgcagtttgcatcgcctgcctgtggcatcctcacgagacgtcaaag
gtggtgacctgtggctgggatggactcattaagtactgggactga
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