Stylophora pistillata (Smooth Cauliflower Coral): 111341310
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Entry
111341310 CDS
T05774
Name
(RefSeq) vacuolar protein sorting-associated protein 18 homolog
KO
K20181
vacuolar protein sorting-associated protein 18
Organism
spis
Stylophora pistillata (Smooth Cauliflower Coral)
Pathway
spis04140
Autophagy - animal
spis04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
spis00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
111341310
04148 Efferocytosis
111341310
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
spis04131
]
111341310
Membrane trafficking [BR:
spis04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
111341310
Hops complex
111341310
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pep3_Vps18
zf-RING_5
zf-RING_11
zf-RING_Vps41
zf-RING_2
zf-C3HC4_2
zf_RING_Vps8_fungal
zf-C3HC4
zf-RING_UBOX
zf-RING_16
UPF0184
TPR_GEMI5
zf-rbx1
zf_RING_Vps8
Lact-deh-memb
zf-C4H2
zf-C3H2C3
Motif
Other DBs
NCBI-GeneID:
111341310
NCBI-ProteinID:
XP_022804004
LinkDB
All DBs
Position
Unknown
AA seq
924 aa
AA seq
DB search
MASILDQYMQASAGENLNPFLGPDITEPISTGYVEVRSEDDVPIFKRQKVNFRPPNNIVD
VVVCNNIVAMVLSNNVLMRLDLTNPSEIDSVDITKRVDDSVHRIFMDPTARHLIVCMKSQ
ESFYLARNSKKPKPLAKMKGHLINAIAWNKSKLTESSTQTILLGTTKGLVFETEVEPEEK
FFQGGLEKFWKQLYNVNSLGGPEESIYGIMFEKFPVSPKSDRKYFVMVSTLSRLYQFIGD
VTVTDSLDLQPLFAEYENDPAPFLEMPGHLDSSELALFYPKVRGLPSSFAWLTGSGLYFG
KLDFSPPESCDNITAETRLLPFELVEGKGTTPLSIGLTGFHALMLYKDRFEAVSLLSEQV
VFEDLFPARFGAMRGLCVDTVKKTLWIFADSAIFQYHVTRESRDVWKMYLERGEFELAKE
YCRDNPANLDKVLTKQADELFESKNYAIAAKCYAQTQVSFEEVALKFIQVEESQALRMFL
LKKLESIKHQDKTQMTMLIMWLIELYLNDLGSLRGKEPKPKYESVQEEFRKFLAQTKVKT
CLDQNRKTAYDLITSHGDVENLIFFAVLMQDFEHVISHHIQQDDFMAALNVLTKQPADTD
LYYKFSPVLMQHIPQQTVNAWIEQRKKKLDPRRLIPALVHYHQEGKPTQDSEEVCYDMKY
ALRLCSEHDKQEACVHIYSTMGLFEEAVDLSLKVDVDLAKIQAQKPSEDDEVLRKKLWLR
IARHVVEEEGDVKKAMEFLNQSELLKIEDILPFFQDFVTIDHFKDAICSSLHEYNQHIEE
LKSEMQEATESARTIRGDIHEMRNKYSIVPAQEKCSICLYPLLTRGFYVFPCHHAFHSDC
LKNEILPYLKEKQRAKVQELFNQLYATSRTDSSSVSSTSRESLKNELDDLMASECIYCGE
IMIRSVDEPFISPDEYESVLESWQ
NT seq
2775 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccatccttgatcagtacatgcaagcgtctgctggagaaaacttgaacccgttt
ttaggaccagacataacagaacccatatcaactggatacgtggaagttaggagtgaggat
gatgttcccatttttaagcgacagaaggtgaacttcagaccaccgaacaatattgtggat
gttgttgtgtgtaacaatattgttgccatggtgttgagcaacaatgtgctgatgcgactg
gacttgacaaacccaagtgaaatagatagtgttgatatcaccaagcgcgtggatgactct
gttcatagaatcttcatggatccaactgcccgacatctcattgtctgcatgaagtctcaa
gagtcattttatttggccaggaattccaagaaacctaaaccattagcaaaaatgaaggga
catctgattaatgccattgcatggaataagtcaaaattgacagagagttctacacagaca
attcttctggggacaaccaaagggctggtttttgaaacagaggtggagccagaagaaaag
ttctttcaaggtggtttggaaaaattttggaagcaactgtacaatgtaaattcacttggt
ggtccagaggagtcaatttatggaatcatgtttgagaagtttccggtgtcaccaaaatct
gacaggaaatactttgttatggtgtcaacattgagccgcctttatcagtttattggtgat
gtaacagttacagactctctggatttacagcctttgtttgcagaatatgagaacgaccca
gcacctttccttgagatgccaggtcatttggattctagtgaattagctctattttacccc
aaggtcagaggtctgccaagttcttttgcgtggctcacagggagtggtctttactttggt
aaactagactttagtcctcctgagtcttgtgataatatcacagcagaaacaagattatta
ccatttgagttggtggaaggaaagggaacaacacctctatccattggtctgacaggtttc
catgcccttatgctttataaagacaggtttgaagccgtatcacttctcagtgaacaagtt
gtgtttgaagatctgtttccagctcggtttggtgcaatgagaggactgtgtgttgataca
gtaaagaagactttgtggatttttgcagattctgctatttttcagtatcatgttacaagg
gagagcagggatgtttggaaaatgtacctggaaagaggggaatttgagttggccaaggag
tattgtagggacaatccagcaaatttggataaagttctaactaaacaagccgacgaacta
tttgaaagcaagaattacgccattgctgccaagtgctacgcccaaactcaagtatcattt
gaggaagttgccttaaagtttattcaagtggaggagagccaggcactcaggatgtttctt
ttaaaaaagctggagagtataaaacaccaggacaagacgcaaatgaccatgctgataatg
tggctgatcgagctgtatttgaacgacctgggaagtttaaggggaaaggaaccaaaaccc
aaatatgaaagcgtacaggaagaattcaggaagttccttgcacaaaccaaagtcaagaca
tgtttagatcagaacaggaagacagcttacgatttgatcactagtcatggagatgtggag
aacttgatattttttgccgtgttgatgcaagattttgagcatgttatcagtcatcatatt
cagcaggatgattttatggctgcactgaatgtcctcactaaacagccagcagatacagat
ctctattacaagttctcgcctgtgctaatgcagcacattccacagcaaactgtcaatgcc
tggattgaacagagaaagaagaagctggatccacgccgactgattcctgcgttggttcac
tatcaccaagaaggaaagcccactcaggattctgaagaagtttgttatgacatgaagtac
gccttgagactctgttcagaacatgacaaacaggaagcttgtgtgcacatctacagtacc
atgggactctttgaagaagctgttgatttgtcgttaaaggtcgatgtagatctcgccaag
attcaagcgcagaagccctcggaggatgacgaggtgttaaggaaaaaactctggcttaga
attgctcggcatgtggtggaagaagaaggagatgtgaaaaaggcaatggagtttttgaac
caaagtgaacttttaaaaattgaagacatccttccatttttccaggattttgttaccatt
gatcatttcaaggatgctatttgctcgtcacttcatgagtacaatcaacacatcgaagaa
ctaaaaagcgaaatgcaagaagctacagaaagcgctagaaccatacgaggagacatccat
gaaatgagaaataaatacagtattgtgccagctcaggagaagtgttcgatctgtttatat
ccactgcttacaagaggcttttatgtgtttccctgccatcacgccttccattcagattgt
ctaaagaacgagattttaccatatcttaaagaaaaacagagggcaaaggtccaagaacta
tttaaccagctctatgcgacgtcaagaactgattcctcctcagtttcatcgacttcacga
gaatctctcaagaatgagctggatgacctgatggcatctgaatgtatttactgtggagaa
attatgataagatctgtggatgaacccttcatctcaccagatgaatatgaaagtgttctg
gagagctggcagtga
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