Stylophora pistillata (Smooth Cauliflower Coral): 111341558
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Entry
111341558 CDS
T05774
Name
(RefSeq) LOW QUALITY PROTEIN: polyadenylate-binding protein 4-like
KO
K13126
polyadenylate-binding protein
Organism
spis
Stylophora pistillata (Smooth Cauliflower Coral)
Pathway
spis03015
mRNA surveillance pathway
spis03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
spis00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
111341558
09123 Folding, sorting and degradation
03018 RNA degradation
111341558
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spis03019
]
111341558
03041 Spliceosome [BR:
spis03041
]
111341558
Messenger RNA biogenesis [BR:
spis03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
111341558
mRNA cycle factors
Stress granule specific factors
111341558
Spliceosome [BR:
spis03041
]
Complex C
Other components
Complex C specific factors
111341558
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
MLLE
RBD_DEAH11
RRM_7
Motif
Other DBs
NCBI-GeneID:
111341558
NCBI-ProteinID:
XP_022804280
LinkDB
All DBs
Position
Unknown
AA seq
637 aa
AA seq
DB search
MNPSTTGNPNYPVASLYVGDLAADVTEAMLFEKFSTVGPVLSIRVCRDIVTRRSLGYAYV
NFQQPAAAERALDTMNFDPIKGRPCRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYD
TFSAFGNILSCKIANGEDGNSKGYGFVHFDDEDAAENAIAKVNGMLLNDKKVFATKWMSR
RERLEKLGNQPKKFTNVYIKNFGEDMTEEGFKELVDEFGKILSLKVVISDQGRSKGFGFV
SFETPEEAQACVDKLSGKDWNGQKLXAARAQKRAERQMDLKSQFEKRKIERINRYQGVNL
YVKNLDDTIDDVRLREEFTPYGTITSAKVMMDDKNNSRGFGFVCFSAPEEATKAVTEMNG
RILVSKPLYVALAQRKEERKAQLAAQHMQRIAGLRMQQAAGQQVGQVFPQAGAFYMQPLA
QAGQRPFFPPQMQQVRPRWQPMQPQQQVRQPGMQGMPGAGQVPRARGIRQVPPRGVPGQQ
QTAGAGGPNQRVGGGMGQAQQVRGPGMQGQGQRPAYKFQQNVRNQPAQGHPAGMAMQPHD
QVQQPIPLPAQNSIDPSALAAATAQEQKQMLGEHLFPLIQQTHPDQAGKITGMLLEIDNA
ELLHMLDSREALAAKIQEAVSVLRAHNAKEKTTEMKN
NT seq
1914 nt
NT seq
+upstream
nt +downstream
nt
atgaatcccagcactactggcaatccaaactatcccgtggcgtctctgtacgttggtgat
ttggcggctgatgtcactgaagctatgctgttcgagaaattcagcactgtgggccctgtt
ttatccatcagagtttgccgtgatatcgttacccgtcgttcgcttggttatgcttacgtg
aattttcaacaaccggctgctgcggagagagctttagatacgatgaatttcgatccaatc
aagggacgaccttgtagaatcatgtggtctcagcgcgatccttctcttcgcaaatctggt
gtcggaaacattttcattaagaatctggacaagagtatcgataacaaggctctgtatgac
accttcagtgctttcggaaacattctctcttgtaagattgctaacggagaagacggaaat
tcgaaaggctatggctttgtacattttgacgacgaagatgctgccgagaatgcaatcgcc
aaggttaatggcatgttgctgaatgacaagaaagtatttgccaccaagtggatgtcccga
agagagcgtctagaaaaactaggaaaccaaccaaagaagttcaccaatgtatacatcaag
aattttggtgaggacatgacagaggagggtttcaaagaacttgtcgatgaatttgggaaa
attctgagtctcaaggtggttatatctgaccagggacgttctaagggatttggttttgtt
tcctttgaaactcctgaagaagcccaagcgtgcgttgataaacttagtggaaaagactgg
aatgggcaaaagctttaggctgccagagcacagaaaagagctgaaagacagatggattta
aagtctcagtttgagaagaggaagattgagcgtatcaatcgttatcagggggttaacttg
tatgtgaagaacttggatgataccattgatgatgtgcgccttcgtgaggaattcactcca
tatggaactatcaccagtgccaaggttatgatggacgataagaacaattccagggggttt
ggttttgtgtgtttctctgctcctgaagaagccaccaaagctgtaaccgagatgaatgga
aggattctggtatccaaacctttgtatgtagccctggcccaacgtaaggaggagcgcaag
gctcagctggcagcacagcacatgcaacgtattgctggtttgagaatgcaacaggcagct
ggtcaacaagttgggcaggttttccctcaagcaggggcattttacatgcagcctttggct
caggctgggcagcgcccattctttccaccacaaatgcaacaagtacgccctcgttggcag
ccaatgcagccacagcagcaggtgcgacaacctggaatgcaaggaatgccaggagcagga
caggttccacgtgctcgaggcatccgtcaggttccacccagaggagtgcctggccagcaa
cagactgcaggggctggaggtcctaaccaacgtgtgggaggaggcatgggccaagcacaa
caggtgcgtggccctggcatgcagggtcagggccagagacctgcgtacaagttccagcaa
aatgtgcgtaaccagcctgcacagggacacccagcaggaatggccatgcaaccacatgat
caggttcaacagcccatccctctcccagcacaaaactccattgacccaagtgcgcttgca
gcagccactgctcaggagcagaaacagatgttaggagagcatttgtttcctctgatccag
cagacccacccagatcaagctggtaagatcactggcatgttgctggaaattgacaatgct
gagttgctgcatatgttagattcacgggaagcactggctgccaagattcaggaagcagtg
tcagtgttgcgtgcccacaatgccaaggaaaagaccactgagatgaagaactga
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