Stylophora pistillata (Smooth Cauliflower Coral): 111342079
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Entry
111342079 CDS
T05774
Name
(RefSeq) splicing factor 3B subunit 3-like
KO
K12830
splicing factor 3B subunit 3
Organism
spis
Stylophora pistillata (Smooth Cauliflower Coral)
Pathway
spis03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
spis00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
111342079
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
spis03021
]
111342079
03041 Spliceosome [BR:
spis03041
]
111342079
03036 Chromosome and associated proteins [BR:
spis03036
]
111342079
Transcription machinery [BR:
spis03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
111342079
Spliceosome [BR:
spis03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
111342079
Complex B
111342079
Complex C
U2 SnRNP specific factors
111342079
Chromosome and associated proteins [BR:
spis03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
STAGA complex
111342079
TFTC complex
111342079
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_RSE1_1st
CPSF_A
Beta-prop_RSE1_2nd
GAAD
Beta-prop_EML
Motif
Other DBs
NCBI-GeneID:
111342079
NCBI-ProteinID:
XP_022804856
LinkDB
All DBs
Position
Unknown
AA seq
1214 aa
AA seq
DB search
MHLYALTLQKASTINHAIHGNFSGSKQQEIVISRGKIIELLRPDPNTGKVFPLLAMEMFG
VIRDLIAFRLTGGSKDYVVVGSDSGRIVILEYIPSKNTFEKVHQETFGKSGCRRIVPGQY
LAVDPKGRAILIGAVEKQKLVYILNRDAAARLTISSPLEAHKSHTLVYHTVGVDVGFENP
MFACLEMDYEDADTDPTGEAVHTTQQTLTFYELDLGLNHVVRKYSEPLEEHGNLLIAVPG
GNDGPSGVLVCSENYITYKNFGDQLDIRMPIPRRKYDLDDPERGMIFVCWATHKTKSMFF
FLMQTEQGDIFKVTMEIDEDMVTEIRLKYFDTVPVASAMCVLKTGFLFTASEFGNHYLYQ
IAHLGDDDDEPEFSSAMKLEEGTTFFFSPRGLKNLVLVDELESLAPVMSCQIADLANEDT
PQLYAACGRGPRSSMRVLRHGLEVSEMAVSELPGNPNAVWTVKTHTQDEFDSYIVVSFIN
ATLVLSIGETVEEVTDSGFLGTTPTLSCSQLGEDALLQVYSEGIRHIRADKRVNEWKTPG
KKTIVKCAVNERQVVIALTGGEIVYFEMDPSGQLNEYTERKEMSSDVQCMALGTVPSGEQ
RSRFLAIGLSDNTVRVISLDPQDCLQPLSMQALPAMPESLCIVEMGLESESGRQGGLFLN
IGLSNGVLLRTVLDLVTGDLSDTRTRYLGSKAVKLFKVRMHGSDAVLAMSSRSWLSYSYQ
SRFHLTPLSYETLEYASSFSSEQCPEGIVAISANTLRILALEKLGAVFNQVATPLRYTPR
KFVIHPQSNNLVIIESDHNAFTDAAKEEKKQQIAEEMVEAAGDDEKELAAQMAAEFLSED
LSELQFGAPKAGPGMWASCLRMLDPIKGETVDEVCLDQNESAVSVCVCNFTCRPDETYAL
VGTAKDLSLNPRSCAGGYIYTYKIAELIDGGYKLEFVHKTEVDDIPGALTPFQGRLLAGV
GRLLRIYDLGKKKLLRKCENKKLPNFIMGLNTMGTRVVVSDIQESFHFVKFKARENHLVI
FADDVNPRWLTCCCYLDYDTVAGADKFGNVFVVRLPSSVSDEVDEDPTGTKAFWDRGLLN
GAPQKVETLCNYHVGETVLSLQKATLIPGGSESLVFTTLSGGIGMLVPFTSREDIDFFQH
LEMHLRAEQPSLCGRDHLSYRSYYLPVKSVIDGDLCEFFNSLDSSKRRNIAEELDRTPAE
VSKKLEDLRTRYAF
NT seq
3645 nt
NT seq
+upstream
nt +downstream
nt
atgcatctgtatgcattgactcttcagaaagcatccaccattaatcatgcaatccatggt
aatttctcaggctctaagcagcaggagattgttatttccagaggaaagatcattgagctt
cttcgtcctgaccccaacactggcaaggtgtttcctctgctagccatggaaatgtttggt
gttattagagatctcattgcttttagactcactggaggttcaaaggattatgtggtggtt
ggaagtgattctggaaggatagttattcttgaatacataccttcaaagaatacttttgag
aaggttcatcaggaaacatttggtaaaagtggttgtcgccgtattgttccaggccagtac
ttagctgttgaccccaaaggtcgagctattttgattggtgctgtggaaaaacagaagtta
gtttatatcctgaacagagatgctgctgctcgtctcacaatttcatctcctcttgaggct
cacaaatcccacacactggtctatcatactgtgggggttgatgttgggtttgaaaatcca
atgtttgcctgtttagagatggattatgaggatgcagatactgaccccactggagaagct
gtacataccactcaacaaaccctgacattttatgaactggatctgggcttgaaccatgtg
gtgcgtaaatatagtgaacctcttgaagaacatggaaaccttctcatagcagtacctgga
ggaaatgacgggccaagtggagtactggtttgctctgaaaactacatcacgtacaaaaat
tttggtgatcagctagatattcgcatgcccataccacgaagaaagtatgatctggatgac
ccagaacgtggcatgatctttgtgtgttgggcaactcacaaaaccaagtccatgttcttc
ttcttgatgcaaacagaacaaggcgacattttcaaggttaccatggaaatagatgaagat
atggttacagagatccgtttgaagtactttgacacagtgccagttgcttctgccatgtgt
gtgctcaaaacaggtttccttttcactgcctcagagtttggaaaccactatctgtatcag
attgcacatcttggtgatgatgatgatgagcctgagttctccagtgcaatgaagcttgaa
gagggaaccactttcttcttctctccaagaggtcttaaaaatttggttcttgtggatgaa
cttgagagtttggctccagttatgtcctgccagattgctgaccttgctaatgaagatact
cctcagctgtatgcagcctgtggcagaggacctcgctcatcaatgagagtcttaaggcac
ggtttggaggtttctgaaatggctgtatcagagctgcctggcaatcccaatgctgtttgg
acagtcaaaacccatacacaagatgaatttgactcgtacattgtggtgtctttcataaac
gctaccttggtgttgtctattggagagacagtagaagaagttactgatagtggttttctt
ggtaccacacccactctttcatgctcacagctgggcgaagatgctctcttacaggtttat
tctgaaggcatccgacacataagggctgacaagcgtgtaaatgaatggaaaactccggga
aagaagacaattgtgaaatgtgctgtgaacgagagacaagttgtcatcgctttgacagga
ggagaaattgtttattttgaaatggatccgtctggccaacttaacgagtacactgaacga
aaggaaatgtcctctgatgtgcagtgtatggctctcggcacggttccctcgggagagcag
cggtccaggtttctagccattggtcttagtgacaacactgtgcgggtgatatccctagac
ccgcaggattgtcttcagccactcagtatgcaggctttgcccgccatgccagagtcactg
tgtattgtggaaatgggtctggagagtgaatctggcagacagggtggactctttctcaac
attggactctcgaatggtgttcttcttcgaacagttttagatttggtcactggagatctc
tccgacaccagaacaagatatcttggttcgaaagctgtgaagctgtttaaagttcgaatg
cacgggtcagatgcggttctagccatgtcaagtcgctcatggctgagttattcttatcag
tcgagattccatcttactccactgtcttacgaaacgctggaatacgcttccagcttctcg
tccgaacaatgtcctgagggaattgtagccatctctgccaacacgttgaggattttagcc
ctcgagaaactgggcgcagtctttaatcaagtggcaactcccttgcggtacaccccaagg
aaatttgtcatccacccccagagtaacaatttagttatcatagagagcgatcataatgct
ttcactgatgcagccaaagaagaaaagaagcagcaaattgccgaggaaatggtcgaggct
gctggcgacgatgagaaggagcttgctgcacaaatggcggctgagtttctgagtgaggat
ctctctgagctgcagtttggtgctccaaaagcaggaccaggaatgtgggcatcttgtttg
agaatgctggaccctattaagggagaaacagttgacgaagtctgcttggatcagaacgaa
tccgcagtcagtgtatgcgtttgtaacttcacctgccgccctgacgaaacatacgcgtta
gttggcacggctaaggatctttcacttaatccgcggtcatgcgcaggaggctatatatac
acgtacaagattgctgagttgattgatggaggatataaactggagtttgtccacaagaca
gaagttgatgacattccaggagcattgactccatttcaggggcgccttttagccggtgtt
ggacgactgttacgaatctatgacctcggaaaaaagaagctccttcgcaaatgtgaaaac
aagaaattgccaaacttcattatgggactgaacacaatgggaacccgagtagtagtgagt
gatattcaagagtcgtttcattttgtcaagttcaaggctagagagaatcatttggttata
ttcgccgatgatgtaaatccaaggtggctaacctgctgttgttatttagactacgacact
gttgcaggcgctgataaatttggtaacgtcttcgtggttcgccttccgtccagcgttagt
gatgaggttgatgaagaccctacaggcactaaagcattctgggatcgagggctcctaaac
ggtgctccccaaaaggtcgagacgctgtgtaattatcacgtgggtgaaacagtcctgtca
ttgcagaaggccactttgatccccggagggtccgagtcgttagttttcaccaccctgtcg
ggaggtattggtatgctggtgccgttcacatcaagagaggacattgactttttccagcac
cttgagatgcacttgcgggctgagcaaccgtccctgtgtggccgtgatcatctgtcttac
agatcttactacttgccagtcaaaagcgtgattgacggagatctctgtgaattctttaat
tctttggattcttcgaaacgacgcaacatcgccgaagaactcgatcgtacaccagccgag
gtgtccaagaagcttgaagatttaagaacacgttacgctttctag
DBGET
integrated database retrieval system
