Stylophora pistillata (Smooth Cauliflower Coral): 111342828
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Entry
111342828 CDS
T05774
Name
(RefSeq) LOW QUALITY PROTEIN: endoribonuclease Dicer-like
KO
K11592
endoribonuclease Dicer [EC:3.1.26.-]
Organism
spis
Stylophora pistillata (Smooth Cauliflower Coral)
Brite
KEGG Orthology (KO) [BR:
spis00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
spis03036
]
111342828
Chromosome and associated proteins [BR:
spis03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
111342828
microRNA pathway
RISC loading complex
111342828
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ribonuclease_3
Dicer_dsRBD
Ribonucleas_3_3
Dicer_platform
Dicer_PBD
Dicer_dimer
PAZ
DEAD
dsrm
NLE
Motif
Other DBs
NCBI-GeneID:
111342828
NCBI-ProteinID:
XP_022805684
LinkDB
All DBs
Position
Unknown
AA seq
1794 aa
AA seq
DB search
MERAQEMSFVWPHHSVDIAERVLASEQSCVVCVSRDKSKTFIAFNVCQEFWRRNVKCGKM
ILLVDDEKATIVEPFLTGISNQSLLSVKAFFKKPGVEDEWNCSFSMCDIIVTTGEAFAQR
LIARTMELSLCSLIIFDQCHLVLNQEHHFAIILQKMKESNLESRPHIMGLSSQILCHQDC
SEDMEIFLTSLEQIFNCRTLISSDLLALNQYGEYTEMEIGCFICSHVQDPHIFNLSKIFE
RALFFLKDYRMNQVTETCVIFARHILTEGHRVLLLLGSWCTWYMAKITVREIDKLEKKSV
DCEIVLILQFCRTQIRLVISILEQEKLEVSVNDLTDLGSILLSRTSMHLKPEHQEVNNSV
PTLGTNQGLYEEPLQSCESCLIDKVSSSESQDILQGPNTQSLNLQTSYGTKNQCNDPLCV
ILVPSTIIAKALNSLLNKLSNAVVKYSFLKSACIHGNKAKEEMKESSFSDEVDENVMVCV
QDGSFNVLIATFEIEQELYAKRCSLLIRLGMPNTYENYYSVKSKLKSAGGSLVVLVREEE
LAETEAKYQIFQRIEKLLWERCPNSRPPGHETRKLFQESQADVYQPLGEGGAKVELLSSI
ALVNSYCGKFPSSGVGYPVPVCRMQEVWSNKEVQFVATLFLPRNSPVYQPIKGSVTLKTT
DINEDTMRKAKVKSEMLAALEACRLLHKREELTDDLQPLFRWHAYNLTVQHEPCDCEVAD
GGVGVDGTVTRNRAYKRKFPTLLENNFPVCGEPCYVYSLTMELTKPWNFERALRSRSKAK
ATSDSYSIGVLSRKPLPKLPRIAIFDRAGEVTVTVTECCPQSIFLTADQLSLLQRFTEYV
FKEIARPKKESSATFLSFDPTIAFSGYYILFLKDASSSRSLAGLSSNNHKEVAFDFMFSL
EDKLGCFKNPVYSGPPDITDAEIFRDTVVTATYNEKRSHYYVADICYDLSPSDPFPNIEV
AGTFAEYVKIRYDVEVSLDQPMLDVDHTSSRLNFLLPNYENFKGQHPRIPEKNSKRSRKS
KVYLIPELCSIHPVPGHLWRQLSNLPAVLYRIESLLVAEELRCWVVRDLGIGVVDWPKDV
PLPPVTVGETMGEEILPAIGSSAVESNGKRSSQVALVNLTSPFSAQLPEVFMDLKISNQV
ELTEKSAAKSLAGGLSNGARESCLSMSSETFLVEHSCAETECKPLFRPAPHQGLLIPSKE
KEDFWPNKLSDLNVPLPTERRAFDCDSIPANDKESEVSAVSIWTDPVLSNLYRTCGPPSS
LILRALTTTLAGDVFSLERLEVLGDSFVKYAISSSVFFKHRYENEGVLSFLRGIKVRNRQ
LFYLARQRGLPSYMFTRVFNPLVNWLPPGFYLDNDSNAENSGYDHHSVISDTFLDEVDDE
EDDDSIFAETESSGYNSDCRQGESPDVQLNSYLHVCCSDKSIADCTEALMGAFLLCFGXD
GAFKFLEWLGMEIERDEKDENLVHKPSSDDSAGDAVPKPASTMCHHYTSHVPQQASETLQ
ENLSLLDDETVPSASIGRLSSEHESTADEFKDVEEALHYLFHDKSLLVQAFTHSSLPGDY
NSVRNSYEQLEFLGDALLDFLVTRYLYVNHRHMSPGELTDLRTALVNNYSFAVLAVKLGF
PRHLRSCSPQLFGMVNKFMVKLKEKERKHARTHRKNDEIYSSVFVMETEGRDDPEQVELP
KVLGDLFEAVAGAMYLDCGADIEMVWEVYLPILKPSMDYYSEHPPMSAIRRLLEMKPYAA
KFSPVERMVDGKFKCTLTVTGCGTFVATGRNFRIAKSTAAQKALRALQQMESET
NT seq
5385 nt
NT seq
+upstream
nt +downstream
nt
atggaaagggctcaggagatgtcatttgtctggccacatcattctgttgatatagctgaa
cgagtgctggcgagcgaacaatcttgcgttgtttgtgtctcaagggacaagtctaaaaca
ttcattgcattcaatgtgtgtcaagagttttggagaagaaacgtgaaatgtggcaaaatg
attctgttggtggatgatgagaaagccaccattgtggagcctttcctaacaggaatatca
aaccaaagtctcctgtctgtaaaagcatttttcaagaaaccaggtgttgaagatgagtgg
aactgcagtttctccatgtgcgacataatagtaacaacaggagaggcttttgcacagagg
ttgatcgctagaacaatggaattgtcattatgcagtttaattatttttgaccaatgtcac
cttgtcttaaatcaggagcatcattttgctattatacttcagaaaatgaaagagagtaat
cttgaatctagaccacacattatgggcctttcatcacaaattctttgtcatcaagattgt
tcagaagatatggaaatctttttaacctcactggagcagatttttaattgcagaacacta
atttctagtgatcttctggctttgaaccaatatggagaatacactgaaatggaaattggt
tgttttatttgtagtcatgttcaggatccacatattttcaatctaagcaaaatttttgaa
agagctttattctttctaaaagattacagaatgaatcaggtgactgagacctgtgtaata
tttgcaagacatattttgactgagggccacagggttcttttattgttgggatcgtggtgt
acctggtacatggcaaaaataactgttagggagattgacaagctggagaagaagtctgtg
gactgtgaaattgtgcttattttgcaattctgtagaacgcagattaggttagtcataagt
attttagaacaagaaaagttggaagtttccgtgaatgacttaactgatcttggatcaata
cttctttctcgcacatcaatgcatctaaaacctgaacatcaggaagtaaataactcagtg
ccaaccttaggtactaatcaggggttatatgaagaacctctccaatcctgtgaatcatgt
ctcatagacaaggtttcatcaagtgaaagtcaagacattcttcaaggcccaaacactcag
tctttgaacttgcaaacatcctatggcactaagaatcagtgcaatgaccctctgtgtgtc
attcttgttccaagcacaatcattgctaaggcactgaattctcttcttaacaaactttct
aatgctgtagtaaagtacagtttccttaagagtgcatgcattcatggtaataaagcaaaa
gaagaaatgaaagagtctagcttttctgatgaagtagacgaaaatgtaatggtgtgtgtt
caagatggctcttttaatgttctgattgcaacatttgaaattgaacaagaactgtatgcc
aagagatgtagtctgttgattcgtttgggtatgccgaacacttacgagaattattacagt
gtaaagagcaaacttaagtccgctggaggcagtcttgtagttcttgtgagagaagaagaa
ctggctgagacagaagcaaaataccagatttttcagaggattgagaaactgttatgggag
aggtgtccaaatagccggcctcctggccatgagacaaggaaactgtttcaagaaagccag
gcagatgtctatcaacccttaggcgaaggaggtgctaaggttgagcttctctccagtatt
gctcttgttaacagctattgtggcaagttccccagcagtggagtgggttatccagtacct
gtgtgtagaatgcaagaagtatggtctaacaaggaagtacagtttgtcgctacactgttc
cttccccggaactctcctgtttaccaacccataaagggcagtgtaacactgaagacaact
gacattaatgaggatacaatgagaaaagccaaagtcaagtctgaaatgttggctgctctg
gaggcttgtcgactgttgcacaaaagagaagaactaactgacgatcttcaacctttattc
aggtggcacgcttataatctcacggttcaacatgaaccgtgtgactgtgaagttgccgat
ggtggggttggagtagacggaacagttacgagaaaccgagcttacaagagaaagttccct
accctgctagaaaacaatttccccgtttgtggtgaaccatgctatgtctactcgctcacc
atggagttgaccaaaccgtggaactttgaacgtgctctcaggtcaagaagtaaagcaaag
gcgacctcagattcttacagtattggggttctatccaggaaaccattacccaagttgcct
cgtattgcaatatttgacagagcaggggaagtaactgtgactgtcactgagtgctgtcca
caatctattttcctgaccgctgaccagctttcactcctgcagagattcaccgagtatgtc
ttcaaggagatcgcaagaccgaaaaaggaatcttcagctacgttcttatcgtttgaccca
accattgccttttctggttattacatcttatttctaaaggatgcctccagtagccgctct
ctcgcaggactttcttcaaacaatcacaaggaagttgcgtttgatttcatgttctcctta
gaggacaaactaggctgctttaaaaatcctgtctattccgggccacctgacatcaccgac
gctgagattttcagagatacagttgtaacggccacatacaacgagaaacgaagccattac
tatgtggctgacatatgctacgatctcagcccatcagacccatttccaaatattgaagta
gctggtacatttgcagagtacgttaaaattcgttacgatgtggaggtatccctggaccaa
cccatgctagatgtggatcacacatcatcccgactgaacttcctgttaccgaattatgag
aacttcaaaggacaacacccgcgtataccagagaagaattccaagcggtcaaggaagtcg
aaggtgtacctgattcctgagctgtgttccattcatccggtgccaggacacctctggcgg
cagctatctaatctgccagctgtgctgtatcgtatcgaatcgcttctggttgccgaggag
ctaagatgctgggttgttagggatcttggtataggagttgtggattggccaaaggatgtt
ccactgccaccggtgacagttggagagacgatgggtgaggaaattctgcctgcaataggg
tcctctgcagtagagtcaaacggcaaaaggtcctcccaggtggccttggtcaacctgacc
tctcctttctccgcacagctaccggaagtgtttatggatctcaagatctccaatcaagta
gaactgactgagaaatctgctgccaaaagccttgccggggggctctctaatggcgccaga
gagagctgtttgtcaatgagctctgagacctttcttgttgaacattcttgcgctgaaacg
gagtgcaaaccactctttcgtccagcacctcatcaaggtctcctgatccccagtaaagaa
aaagaagatttttggccaaataagttgtctgacttaaatgtaccccttccaacagagcgt
agagcatttgattgcgattcaataccagcaaatgacaaagaaagcgaggtgtctgctgtc
tcaatttggaccgacccggttctttcgaacctgtaccgaacctgtggcccgccgtcatcg
ttgattttacgtgctctaacaacaaccttggctggagatgtattttctctcgagcgtctt
gaagttcttggcgattcatttgtgaagtatgccatttcttcttctgttttcttcaaacac
aggtacgagaacgaaggggttctatcgttcctccggggtattaaagtaaggaaccggcaa
ctgttttatctggcaaggcaacgtggtctcccgtcctacatgttcacccgagtgttcaac
cctttggtaaattggctgccgcctggattctatcttgacaacgacagcaacgctgaaaac
tcgggttacgatcatcatagcgtgatttctgacacatttcttgatgaagttgatgacgag
gaagatgatgatagtattttcgcggagacggaaagttcaggttacaactctgattgtcgg
caaggcgaatctcctgatgtccaactgaactcttaccttcatgtctgttgttctgataaa
tccattgctgattgcaccgaagcccttatgggggcatttcttttgtgttttggataggat
ggagctttcaagtttctggaatggttgggtatggaaatagagagagacgagaaagatgaa
aacttagtgcacaaaccatcttctgatgattccgctggcgatgcagttccaaaaccagcc
tcaaccatgtgtcatcactatacgtcccatgtacctcagcaagcttctgaaacattgcaa
gaaaacttgtccttgttagacgacgaaactgttcctagtgcatcaatcggtaggctctct
tcagaacatgagtcgacagctgacgagttcaaggatgtggaggaagctctacactacctc
ttccatgacaaatctctgttagtgcaagccttcacccatagttccttacctggggactat
aactcagttagaaacagctatgaacaactggagttcttgggagatgcattgttggatttc
ctagtgacgcgttatttgtacgtaaatcacagacacatgtccccaggcgagctgactgat
ctgcgaactgctttggtaaacaactacagttttgctgttctggctgtgaaattgggattt
cctagacatttgaggtcctgctctccacagctgttcggcatggtgaacaagtttatggtg
aagctgaaagagaaagagaggaagcatgcaagaacgcataggaagaatgacgagatttat
tccagtgtttttgtgatggaaaccgagggaagagatgatcctgagcaggtggagttacct
aaggtgctgggcgatctgtttgaggctgtcgctggtgccatgtatctggactgtggtgca
gacattgaaatggtgtgggaagtctatctgccgattctcaagccctcgatggattactac
tcagagcatcctcccatgtcagccattcggcgattgttggagatgaagccttatgcagcc
aagttttcgccggtagagagaatggtggatggtaaattcaaatgtacccttactgtaaca
ggttgtggaactttcgttgccacgggaagaaatttccgaattgcaaaatcaacagctgcc
cagaaagccctaagggctcttcagcagatggagtcagagacataa
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integrated database retrieval system
